Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0152s0028 Marchantia polymorpha HOM05D005603 ORTHO05D006944 2.7e-241 838.2 404 100.0
Pp3c2_6370 Physcomitrium patens HOM05D005603 ORTHO05D006944 3.6e-169 598.6 401 73.6
SMO117G0153 Selaginella moellendorffii HOM05D005603 ORTHO05D006944 3.6e-169 598.6 404 71.3
Pp3c10_8990 Physcomitrium patens HOM05D005603 ORTHO05D006944 1.4e-168 596.7 402 72.9
AagrBONN_evm.TU.Sc2ySwM_228.543 Anthoceros agrestis HOM05D005603 ORTHO05D006944 1.2e-167 593.6 404 72.3
Mapoly0094s0075 Marchantia polymorpha HOM05D005603 ORTHO05D006944 5.9e-156 554.7 401 68.8
Aqoxy5G01490 Aquilegia oxysepala HOM05D005603 ORTHO05D006944 1.4e-152 543.5 400 66.2
AUR62007651 Chenopodium quinoa HOM05D005603 ORTHO05D006944 1.2e-151 540.4 401 65.3
Hund14030 Selenicereus undatus HOM05D005603 ORTHO05D006944 1.2e-151 540.4 401 65.1
EL10As8g23850 Beta vulgaris HOM05D005603 ORTHO05D006944 2.6e-151 539.3 402 64.4
Nn5g29214 Nelumbo nucifera HOM05D005603 ORTHO05D006944 2.6e-151 539.3 400 65.8
Sc03g0003440 Simmondsia chinensis HOM05D005603 ORTHO05D006944 9.8e-151 537.3 400 64.0
TAR376G0194 Trochodendron aralioides HOM05D005603 ORTHO05D006944 2.9e-150 535.8 400 64.5
TAR628G0819 Trochodendron aralioides HOM05D005603 ORTHO05D006944 2.9e-150 535.8 401 64.8
CDE05G2538 Ceratophyllum demersum HOM05D005603 ORTHO05D006944 6.4e-150 534.6 400 65.2
Cc07_g10420 Coffea canephora HOM05D005603 ORTHO05D006944 6.4e-150 534.6 400 64.5
CsaV3_6G046890 Cucumis sativus L. HOM05D005603 ORTHO05D006944 8.3e-150 534.3 400 64.8
Sopen02g029190 Solanum pennellii HOM05D005603 ORTHO05D006944 1.1e-149 533.9 402 64.7
Ciclev10025760m.g Citrus clementina HOM05D005603 ORTHO05D006944 1.9e-149 533.1 401 65.3
QL06p033966 Quercus lobata HOM05D005603 ORTHO05D006944 1.9e-149 533.1 401 65.3
MSTRG.15764 Avicennia marina HOM05D005603 ORTHO05D006944 2.4e-149 532.7 400 64.5
CiPaw.07G056000 Carya illinoinensis HOM05D005603 ORTHO05D006944 2.4e-149 532.7 402 65.7
RcHm_v2.0_Chr2g0099911 Rosa chinensis HOM05D005603 ORTHO05D006944 2.4e-149 532.7 400 64.8
Manes.02G101300 Manihot esculenta HOM05D005603 ORTHO05D006944 3.2e-149 532.3 400 64.8
CSS0040106 Camellia sinensis var. sinensis HOM05D005603 ORTHO05D006944 4.1e-149 531.9 404 64.1
HanXRQChr16g0531111 Helianthus annuus HOM05D005603 ORTHO05D006944 5.4e-149 531.6 399 64.4
ClCG01G020120 Citrullus lanatus HOM05D005603 ORTHO05D006944 7.0e-149 531.2 400 65.2
MELO3C007885.2 Cucumis melo HOM05D005603 ORTHO05D006944 7.0e-149 531.2 400 64.5
Oeu035330.1 Olea europaea HOM05D005603 ORTHO05D006944 9.2e-149 530.8 400 64.5
Sed0002868 Sechium edule HOM05D005603 ORTHO05D006944 9.2e-149 530.8 400 65.2
TWI09G0997 Tripterygium wilfordii HOM05D005603 ORTHO05D006944 1.6e-148 530.0 400 63.8
Nitab4.5_0008176g0030 Nicotiana tabacum HOM05D005603 ORTHO05D006944 2.0e-148 529.6 415 62.4
Hund16476 Selenicereus undatus HOM05D005603 ORTHO05D006944 2.7e-148 529.3 432 60.9
DCAR_021493 Daucus carota HOM05D005603 ORTHO05D006944 3.5e-148 528.9 400 63.8
Gohir.A02G169100 Gossypium hirsutum HOM05D005603 ORTHO05D006944 4.6e-148 528.5 400 64.5
Gohir.D03G010900 Gossypium hirsutum HOM05D005603 ORTHO05D006944 4.6e-148 528.5 400 64.5
Gorai.003G011300 Gossypium raimondii HOM05D005603 ORTHO05D006944 4.6e-148 528.5 400 64.5
Migut.L00039 Erythranthe guttata HOM05D005603 ORTHO05D006944 6.0e-148 528.1 400 64.0
CAN.G358.2 Capsicum annuum HOM05D005603 ORTHO05D006944 1.0e-147 527.3 400 64.2
FvH4_1g12160 Fragaria vesca HOM05D005603 ORTHO05D006944 1.0e-147 527.3 400 64.8
PSO541G2355 Papaver somniferum HOM05D005603 ORTHO05D006944 1.0e-147 527.3 399 63.7
PSO675G2068 Papaver somniferum HOM05D005603 ORTHO05D006944 1.0e-147 527.3 399 63.7
ECA246G4842 Erigeron canadensis HOM05D005603 ORTHO05D006944 1.3e-147 526.9 401 63.8
MD15G1249000 Malus domestica HOM05D005603 ORTHO05D006944 1.3e-147 526.9 402 63.2
COL.COLO4_21962 Corchorus olitorius HOM05D005603 ORTHO05D006944 1.7e-147 526.6 400 64.2
THA.LOC104819186 Tarenaya hassleriana HOM05D005603 ORTHO05D006944 1.7e-147 526.6 400 63.5
Potri.005G117200 Populus trichocarpa HOM05D005603 ORTHO05D006944 2.3e-147 526.2 400 65.2
MD02G1111100 Malus domestica HOM05D005603 ORTHO05D006944 3.0e-147 525.8 402 62.9
Eucgr.I02369 Eucalyptus grandis HOM05D005603 ORTHO05D006944 3.9e-147 525.4 400 63.5
Glyma.01G168600 Glycine max HOM05D005603 ORTHO05D006944 6.6e-147 524.6 400 64.2
SalBow8G5567 Salvia bowleyana HOM05D005603 ORTHO05D006944 6.6e-147 524.6 410 63.2
Thecc.01G023100 Theobroma cacao HOM05D005603 ORTHO05D006944 8.6e-147 524.2 400 64.2
AL5G31550 Arabidopsis lyrata HOM05D005603 ORTHO05D006944 1.1e-146 523.9 400 63.0
SGA_v2.0_scaffold47G17673 Striga asiatica HOM05D005603 ORTHO05D006944 1.1e-146 523.9 407 63.6
Psat2g155920 Pisum sativum HOM05D005603 ORTHO05D006944 1.9e-146 523.1 400 63.5
Carub.0005s1753 Capsella rubella HOM05D005603 ORTHO05D006944 2.5e-146 522.7 400 63.0
TPR.G2333 Trifolium pratense HOM05D005603 ORTHO05D006944 2.5e-146 522.7 400 63.2
arahy.Tifrunner.gnm1.ann1.V913IW Arachis hypogaea HOM05D005603 ORTHO05D006944 3.3e-146 522.3 400 63.8
GSVIVG01018824001 Vitis vinifera HOM05D005603 ORTHO05D006944 4.3e-146 521.9 400 63.5
Lj2g0023828 Lotus japonicus HOM05D005603 ORTHO05D006944 7.3e-146 521.2 405 63.5
Ca_24898_v3 Cicer arietinum L. HOM05D005603 ORTHO05D006944 9.5e-146 520.8 400 63.2
AT3G51130 Arabidopsis thaliana HOM05D005603 ORTHO05D006944 1.6e-145 520.0 400 62.8
Lsat_1_v5_gn_3_73720 Lactuca sativa HOM05D005603 ORTHO05D006944 2.1e-145 519.6 394 63.5
Phvul.002G111500 Phaseolus vulgaris HOM05D005603 ORTHO05D006944 2.1e-145 519.6 400 63.5
CSS0042462 Camellia sinensis var. sinensis HOM05D005603 ORTHO05D006944 2.8e-145 519.2 400 63.5
Glyma.11G074800 Glycine max HOM05D005603 ORTHO05D006944 2.8e-145 519.2 400 63.5
Os06g0714000 Oryza sativa ssp. japonica HOM05D005603 ORTHO05D006944 4.7e-145 518.5 401 63.3
Prupe.7G165200 Prunus persica HOM05D005603 ORTHO05D006944 4.7e-145 518.5 400 63.5
Aa31LG4G19220 Aethionema arabicum HOM05D005603 ORTHO05D006944 8.1e-145 517.7 400 63.0
Potri.007G015800 Populus trichocarpa HOM05D005603 ORTHO05D006944 8.1e-145 517.7 400 63.5
Duzib147G0771 Durio zibethinus HOM05D005603 ORTHO05D006944 1.4e-144 516.9 400 63.0
Sp5g11080 Schrenkiella parvula HOM05D005603 ORTHO05D006944 1.4e-144 516.9 400 62.2
VMungo1215G2039 Vigna mungo HOM05D005603 ORTHO05D006944 1.4e-144 516.9 400 63.2
Peaxi162Scf00083g01233 Petunia axillaris HOM05D005603 ORTHO05D006944 1.8e-144 516.5 394 63.5
CANSAT01G2298 Cannabis sativa HOM05D005603 ORTHO05D006944 2.3e-144 516.2 400 62.8
Thhalv10010418m.g Eutrema salsugineum HOM05D005603 ORTHO05D006944 2.3e-144 516.2 400 62.5
Medtr5g021520 Medicago truncatula HOM05D005603 ORTHO05D006944 4.0e-144 515.4 401 62.8
BcaC06g33053 Brassica carinata HOM05D005603 ORTHO05D006944 1.2e-143 513.8 400 62.8
HPP92_025419 Vanilla planifolia HOM05D005603 ORTHO05D006944 1.2e-143 513.8 402 61.7
PGSC0003DMG400003547 Solanum tuberosum HOM05D005603 ORTHO05D006944 1.5e-143 513.5 389 64.0
CSS0001882 Camellia sinensis var. sinensis HOM05D005603 ORTHO05D006944 2.6e-143 512.7 400 63.0
Hma1.2p1_0743F.1_g211450 Hydrangea macrophylla HOM05D005603 ORTHO05D006944 3.4e-143 512.3 413 62.7
CARHR160730 Cardamine hirsuta HOM05D005603 ORTHO05D006944 5.8e-143 511.5 400 62.0
ATR0620G128 Amborella trichopoda HOM05D005603 ORTHO05D006944 1.3e-142 510.4 409 62.1
Nitab4.5_0000912g0020 Nicotiana tabacum HOM05D005603 ORTHO05D006944 8.3e-142 507.7 408 61.3
arahy.Tifrunner.gnm1.ann1.8YZ064 Arachis hypogaea HOM05D005603 ORTHO05D006944 1.1e-141 507.3 429 59.2
FAN28G0526 Fragaria x ananassa HOM05D005603 ORTHO05D006944 1.6e-140 503.4 400 62.2
Rhsim08G0035200 Rhododendron simsii HOM05D005603 ORTHO05D006944 1.1e-138 497.3 412 59.7
Sed0017160 Sechium edule HOM05D005603 ORTHO05D006944 1.1e-138 497.3 404 61.4
MSTRG.3829 Avicennia marina HOM05D005603 ORTHO05D006944 1.5e-138 496.9 401 60.6
A03p48150 Brassica napus HOM05D005603 ORTHO05D006944 2.1e-137 493.0 385 61.8
BraA03t13922Z Brassica rapa HOM05D005603 ORTHO05D006944 2.1e-137 493.0 385 61.8
BolC7t45134H Brassica oleracea HOM05D005603 ORTHO05D006944 2.4e-136 489.6 387 61.8
FAN23G1635 Fragaria x ananassa HOM05D005603 ORTHO05D006944 2.4e-136 489.6 395 61.0
vmacro22086 Vaccinium macrocarpon HOM05D005603 ORTHO05D006944 6.4e-134 481.5 369 62.6
Cpa.g.sc6.214 Carica papaya HOM05D005603 ORTHO05D006944 1.1e-133 480.7 414 59.9
Haze_03808 Corylus avellana HOM05D005603 ORTHO05D006944 1.4e-133 480.3 400 60.8
A09p44190 Brassica napus HOM05D005603 ORTHO05D006944 1.9e-133 479.9 386 60.6
BraA09t39879Z Brassica rapa HOM05D005603 ORTHO05D006944 2.4e-133 479.6 386 60.6
BolC8t50258H Brassica oleracea HOM05D005603 ORTHO05D006944 3.2e-133 479.2 386 60.1
FAN19G0288 Fragaria x ananassa HOM05D005603 ORTHO05D006944 4.1e-133 478.8 385 61.6
BcaB01g00547 Brassica carinata HOM05D005603 ORTHO05D006944 5.4e-133 478.4 386 60.6
C07p46180 Brassica napus HOM05D005603 ORTHO05D006944 1.6e-132 476.9 404 58.9
SEGI_22640 Sequoiadendron giganteum HOM05D005603 ORTHO05D006944 2.3e-131 473.0 354 66.1
TWI53G1238 Tripterygium wilfordii HOM05D005603 ORTHO05D006944 8.6e-131 471.1 366 63.1
FAN26G2705 Fragaria x ananassa HOM05D005603 ORTHO05D006944 7.3e-130 468.0 378 61.1
unitig_32.g11821 Utricularia gibba HOM05D005603 ORTHO05D006944 3.1e-128 462.6 382 61.0
C08p26410 Brassica napus HOM05D005603 ORTHO05D006944 5.2e-128 461.8 367 61.6
Zm00001eb227930 Zea mays HOM05D005603 ORTHO05D006944 4.4e-127 458.8 401 57.1
Sabra05G0096200 Salix brachista HOM05D005603 ORTHO05D006944 5.8e-127 458.4 408 59.1
vmacro18394 Vaccinium macrocarpon HOM05D005603 ORTHO05D006944 9.3e-125 451.1 353 62.0
Sabra07G0013000 Salix brachista HOM05D005603 ORTHO05D006944 3.3e-122 442.6 400 57.8
Lj4C215G4 Lonicera japonica HOM05D005603 ORTHO05D006944 4.3e-122 442.2 400 57.5
Duzib264G0505 Durio zibethinus HOM05D005603 ORTHO05D006944 4.5e-119 432.2 400 55.8
Ah.02g124640 Amaranthus hybridus HOM05D005603 ORTHO05D006944 2.9e-118 429.5 396 56.1
Lalb_Chr16g0377611 Lupinus albus HOM05D005603 ORTHO05D006944 9.6e-114 414.5 318 62.6
Dinv33602 Davidia involucrata HOM05D005603 ORTHO05D006944 1.7e-110 403.7 314 63.7
Dinv40059 Davidia involucrata HOM05D005603 ORTHO05D006944 3.8e-110 402.5 314 63.4
SMO037G0002 Selaginella moellendorffii HOM05D005603 ORTHO05D006944 1.9e-109 400.2 269 71.4
Actinidia31012 Actinidia chinensis HOM05D005603 ORTHO05D006944 2.5e-106 389.8 315 62.9
Lalb_Chr09g0321921 Lupinus albus HOM05D005603 ORTHO05D006944 1.4e-80 304.3 251 61.4
PRCOL_00000516 Prasinoderma coloniale HOM05D005603 ORTHO05D006944 4.2e-77 292.7 437 40.7
CBR_g36682 Chara braunii HOM05D005603 ORTHO05D000002 6.1e-76 288.9 229 64.2
Solyc02g075630.3 Solanum lycopersicum HOM05D005603 ORTHO05D006944 2.9e-70 270.0 217 61.8
Atru.chr3.766 Acer truncatum HOM05D005603 ORTHO05D006944 3.7e-65 253.1 175 68.6
CBR_g36680 Chara braunii HOM05D005603 ORTHO05D006944 1.9e-61 240.7 171 66.1
Migut.H02480 Erythranthe guttata HOM05D005603 ORTHO05D006944 1.8e-59 234.2 381 37.5
Lalb_Chr09g0321931 Lupinus albus HOM05D005603 ORTHO05D006944 1.1e-56 224.9 148 68.2
Nn015s41468 Nelumbo nucifera HOM05D005603 ORTHO05D006944 4.5e-55 219.5 176 63.1
Actinidia26078 Actinidia chinensis HOM05D005603 ORTHO05D006944 3.3e-53 213.4 216 53.7
BcaC06g33054 Brassica carinata HOM05D005603 ORTHO05D006944 3.7e-49 199.9 150 66.0
Nn015s41469 Nelumbo nucifera HOM05D005603 ORTHO05D006944 3.0e-43 180.3 149 61.1
Atru.chr2.40 Acer truncatum HOM05D005603 ORTHO05D006944 2.2e-25 120.9 193 39.4
Actinidia31013 Actinidia chinensis HOM05D005603 ORTHO05D006944 2.8e-20 104.0 72 61.1
Cfa027245 Carpinus fangiana HOM05D005603 ORTHO05D006944 3.5e-15 87.0 274 28.5


User provided reference genes

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