Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0152s0021 Marchantia polymorpha HOM05D006617 ORTHO05D003640 3.4e-121 438.3 221 100.0
Mapoly0050s0059 Marchantia polymorpha HOM05D003252 ORTHO05D003640 2.5e-15 86.7 209 29.2
Pp3c15_7020 Physcomitrium patens HOM05D003252 ORTHO05D003640 1.4e-13 80.9 182 31.3
ATR0377G002 Amborella trichopoda HOM05D003252 ORTHO05D003640 2.2e-11 73.6 195 28.7
Ca_21312_v3 Cicer arietinum L. HOM05D003252 ORTHO05D003640 6.4e-11 72.0 202 29.2
arahy.Tifrunner.gnm1.ann1.R4HL53 Arachis hypogaea HOM05D003252 ORTHO05D003640 4.1e-10 69.3 224 26.8
ClCG11G001480 Citrullus lanatus HOM05D003252 ORTHO05D003640 7.1e-10 68.6 225 27.1
Lalb_Chr05g0224971 Lupinus albus HOM05D006617 ORTHO05D008247 1.2e-09 67.8 187 28.9
Glyma.17G050600 Glycine max HOM05D003252 ORTHO05D003640 1.6e-09 67.4 199 29.1
MELO3C004648.2 Cucumis melo HOM05D003252 ORTHO05D003640 2.7e-09 66.6 207 28.0
CsaV3_2G001200 Cucumis sativus L. HOM05D003252 ORTHO05D003640 6.0e-09 65.5 203 29.1
TPR.G12841 Trifolium pratense HOM05D006617 ORTHO05D008247 6.0e-09 65.5 187 25.1
Glyma.13G108800 Glycine max HOM05D003252 ORTHO05D003640 1.3e-08 64.3 198 26.3
Potri.011G125701 Populus trichocarpa HOM05D003252 ORTHO05D003640 1.7e-08 63.9 206 25.2
Phvul.003G132200 Phaseolus vulgaris HOM05D003252 ORTHO05D003640 2.3e-08 63.5 197 27.9
VMungo1309G1999 Vigna mungo HOM05D003252 ORTHO05D003640 2.3e-08 63.5 200 27.5
Dinv38979 Davidia involucrata HOM05D006617 ORTHO05D008247 3.0e-08 63.2 184 25.5
Aqoxy3G03348 Aquilegia oxysepala HOM05D003252 ORTHO05D003640 3.9e-08 62.8 196 23.5
SEGI_09180 Sequoiadendron giganteum HOM05D003252 ORTHO05D003640 3.9e-08 62.8 191 27.2
VMungo1215G3032 Vigna mungo HOM05D003252 ORTHO05D003640 5.1e-08 62.4 197 27.4
Actinidia14540 Actinidia chinensis HOM05D006617 ORTHO05D008247 6.6e-08 62.0 214 24.8
ECA233G3703 Erigeron canadensis HOM05D006617 ORTHO05D008247 8.6e-08 61.6 164 26.2
Ca_21311_v3 Cicer arietinum L. HOM05D003252 ORTHO05D003640 1.1e-07 61.2 217 25.8
DCAR_008412 Daucus carota HOM05D006617 ORTHO05D008247 1.5e-07 60.8 195 25.1
Atru.chr6.3216 Acer truncatum HOM05D006617 ORTHO05D008247 1.9e-07 60.5 191 24.6
CSS0023405 Camellia sinensis var. sinensis HOM05D006617 ORTHO05D008247 1.9e-07 60.5 208 23.6
Psat7g035840 Pisum sativum HOM05D006617 ORTHO05D008247 2.5e-07 60.1 187 25.1
Nn6g33542 Nelumbo nucifera HOM05D006617 ORTHO05D008247 3.3e-07 59.7 207 24.6
PSO210G6784 Papaver somniferum HOM05D003252 ORTHO05D003640 5.6e-07 58.9 207 24.2
PSO782G1088 Papaver somniferum HOM05D006617 ORTHO05D008247 5.6e-07 58.9 166 25.3
VMungo0251G0775 Vigna mungo HOM05D006617 ORTHO05D008247 7.3e-07 58.5 187 22.5
Potri.014G154900 Populus trichocarpa HOM05D006617 ORTHO05D008247 9.6e-07 58.2 168 24.4
Manes.12G073000 Manihot esculenta HOM05D006617 ORTHO05D008247 1.2e-06 57.8 176 25.0
Medtr8g096960 Medicago truncatula HOM05D006617 ORTHO05D008247 1.2e-06 57.8 187 23.0
PSO386G0167 Papaver somniferum HOM05D003252 ORTHO05D003640 1.2e-06 57.8 210 24.3
AT2G32500 Arabidopsis thaliana HOM05D006617 ORTHO05D008247 1.6e-06 57.4 170 24.7
Sabra14G0117100 Salix brachista HOM05D006617 ORTHO05D008247 1.6e-06 57.4 168 25.0
Hma1.2p1_0514F.1_g169800 Hydrangea macrophylla HOM05D006617 ORTHO05D008247 2.1e-06 57.0 197 22.3
Phvul.002G287200 Phaseolus vulgaris HOM05D006617 ORTHO05D008247 2.1e-06 57.0 187 22.5
Phvul.009G228300 Phaseolus vulgaris HOM05D003252 ORTHO05D003640 4.7e-06 55.8 193 25.9
PGR031G1807 Punica granatum HOM05D006617 ORTHO05D008247 8.1e-06 55.1 190 21.6
Sopen12g028920 Solanum pennellii HOM05D006617 ORTHO05D008247 8.1e-06 55.1 181 22.1


User provided reference genes

Program Settings