Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0149s0008 Marchantia polymorpha HOM05D007067 ORTHO05D008864 6.1e-112 407.5 209 100.0
Pp3c16_3930 Physcomitrium patens HOM05D007067 ORTHO05D008864 7.4e-25 118.2 180 43.3
Migut.D01803 Erythranthe guttata HOM05D007067 ORTHO05D008864 7.6e-22 108.2 110 48.2
CBR_g30507 Chara braunii HOM05D007067 ORTHO05D008864 2.9e-21 106.3 127 45.7
CANSAT56G4102 Cannabis sativa HOM05D007067 ORTHO05D008864 3.8e-21 105.9 97 51.5
Peaxi162Scf00106g00037 Petunia axillaris HOM05D007067 ORTHO05D008864 8.4e-21 104.8 106 49.1
Peaxi162Scf00106g00326 Petunia axillaris HOM05D007067 ORTHO05D008864 8.4e-21 104.8 106 49.1
TAR622G0622 Trochodendron aralioides HOM05D007067 ORTHO05D008864 2.5e-20 103.2 106 47.2
CSS0040643 Camellia sinensis var. sinensis HOM05D007067 ORTHO05D008864 3.2e-20 102.8 106 47.2
CAN.G846.12 Capsicum annuum HOM05D007067 ORTHO05D008864 4.2e-20 102.4 102 46.1
Thecc.03G091100 Theobroma cacao HOM05D007067 ORTHO05D008864 4.2e-20 102.4 104 47.1
EL10Ac5g11044 Beta vulgaris HOM05D007067 ORTHO05D008864 5.5e-20 102.1 102 46.1
MBI02_g12272_MAGBIO Magnolia biondii HOM05D007067 ORTHO05D008864 7.1e-20 101.7 107 43.9
AL1G31200 Arabidopsis lyrata HOM05D007067 ORTHO05D008864 9.3e-20 101.3 97 48.5
AT1G18730 Arabidopsis thaliana HOM05D007067 ORTHO05D008864 9.3e-20 101.3 97 48.5
Carub.0001s1838 Capsella rubella HOM05D007067 ORTHO05D008864 9.3e-20 101.3 97 48.5
Duzib205G1209 Durio zibethinus HOM05D007067 ORTHO05D008864 9.3e-20 101.3 104 46.2
Thhalv10008902m.g Eutrema salsugineum HOM05D007067 ORTHO05D008864 9.3e-20 101.3 97 48.5
Manes.06G091000 Manihot esculenta HOM05D007067 ORTHO05D008864 9.3e-20 101.3 104 47.1
GSVIVG01004672001 Vitis vinifera HOM05D007067 ORTHO05D008864 9.3e-20 101.3 100 47.0
GSVIVG01005334001 Vitis vinifera HOM05D007067 ORTHO05D008864 9.3e-20 101.3 100 47.0
Aa31LG7G3520 Aethionema arabicum HOM05D007067 ORTHO05D008864 1.2e-19 100.9 97 48.5
A09p59720 Brassica napus HOM05D007067 ORTHO05D008864 1.2e-19 100.9 97 47.4
BraA09t41348Z Brassica rapa HOM05D007067 ORTHO05D008864 1.2e-19 100.9 97 47.4
Cpa.g.sc111.20 Carica papaya HOM05D007067 ORTHO05D008864 1.2e-19 100.9 104 47.1
Cc04_g16320 Coffea canephora HOM05D007067 ORTHO05D008864 1.6e-19 100.5 102 45.1
Gohir.A03G067300 Gossypium hirsutum HOM05D007067 ORTHO05D008864 1.6e-19 100.5 104 46.2
Gohir.D03G093800 Gossypium hirsutum HOM05D007067 ORTHO05D008864 1.6e-19 100.5 104 46.2
Gorai.003G097800 Gossypium raimondii HOM05D007067 ORTHO05D008864 1.6e-19 100.5 104 46.2
SalBow3G2729 Salvia bowleyana HOM05D007067 ORTHO05D008864 1.6e-19 100.5 102 48.0
BcaB03g14481 Brassica carinata HOM05D007067 ORTHO05D008864 2.1e-19 100.1 97 47.4
BcaB07g31890 Brassica carinata HOM05D007067 ORTHO05D008864 2.1e-19 100.1 97 47.4
BcaC05g25773 Brassica carinata HOM05D007067 ORTHO05D008864 2.1e-19 100.1 97 47.4
A06p14840 Brassica napus HOM05D007067 ORTHO05D008864 2.1e-19 100.1 97 47.4
C05p17040 Brassica napus HOM05D007067 ORTHO05D008864 2.1e-19 100.1 97 47.4
C08p43060 Brassica napus HOM05D007067 ORTHO05D008864 2.1e-19 100.1 97 47.4
BolC5t30410H Brassica oleracea HOM05D007067 ORTHO05D008864 2.1e-19 100.1 97 47.4
BraA06t24606Z Brassica rapa HOM05D007067 ORTHO05D008864 2.1e-19 100.1 97 47.4
CARHR019370 Cardamine hirsuta HOM05D007067 ORTHO05D008864 2.1e-19 100.1 97 47.4
Sp1g16740 Schrenkiella parvula HOM05D007067 ORTHO05D008864 2.1e-19 100.1 97 47.4
Actinidia04879 Actinidia chinensis HOM05D007067 ORTHO05D008864 2.7e-19 99.8 100 45.0
MBI02_g23462_MAGBIO Magnolia biondii HOM05D007067 ORTHO05D008864 2.7e-19 99.8 105 42.9
MSTRG.9621 Avicennia marina HOM05D007067 ORTHO05D008864 3.5e-19 99.4 102 44.1
AUR62008437 Chenopodium quinoa HOM05D007067 ORTHO05D008864 3.5e-19 99.4 102 44.1
Dinv38731 Davidia involucrata HOM05D007067 ORTHO05D008864 3.5e-19 99.4 102 44.1
CDE02G3919 Ceratophyllum demersum HOM05D007067 ORTHO05D008864 4.6e-19 99.0 101 43.6
Sabra12G0047100 Salix brachista HOM05D007067 ORTHO05D008864 4.6e-19 99.0 100 47.0
Nn3g17293 Nelumbo nucifera HOM05D007067 ORTHO05D008864 6.0e-19 98.6 102 45.1
Potri.012G068500 Populus trichocarpa HOM05D007067 ORTHO05D008864 6.0e-19 98.6 100 46.0
ATR0564G121 Amborella trichopoda HOM05D007067 ORTHO05D008864 1.0e-18 97.8 109 46.8
Aqoxy3G00483 Aquilegia oxysepala HOM05D007067 ORTHO05D008864 1.0e-18 97.8 102 45.1
Lj5A109T72 Lonicera japonica HOM05D007067 ORTHO05D008864 1.0e-18 97.8 103 43.7
PSO063G5395 Papaver somniferum HOM05D007067 ORTHO05D008864 1.0e-18 97.8 97 45.4
PSO832G0421 Papaver somniferum HOM05D007067 ORTHO05D008864 1.0e-18 97.8 97 45.4
THA.LOC104808257 Tarenaya hassleriana HOM05D007067 ORTHO05D008864 1.0e-18 97.8 100 47.0
TWI60G1483 Tripterygium wilfordii HOM05D007067 ORTHO05D008864 1.0e-18 97.8 100 48.0
Hma1.2p1_0637F.1_g193620 Hydrangea macrophylla HOM05D007067 ORTHO05D008864 1.3e-18 97.4 100 44.0
Nitab4.5_0003381g0030 Nicotiana tabacum HOM05D007067 ORTHO05D008864 1.3e-18 97.4 102 44.1
Nitab4.5_0005226g0040 Nicotiana tabacum HOM05D007067 ORTHO05D008864 1.3e-18 97.4 102 44.1
Solyc12g036170.2 Solanum lycopersicum HOM05D007067 ORTHO05D008864 1.3e-18 97.4 102 43.1
PGSC0003DMG400021933 Solanum tuberosum HOM05D007067 ORTHO05D008864 1.3e-18 97.4 102 43.1
DCAR_016569 Daucus carota HOM05D007067 ORTHO05D008864 1.8e-18 97.1 106 45.3
Sed0012968 Sechium edule HOM05D007067 ORTHO05D008864 1.8e-18 97.1 101 48.5
MELO3C017182.2 Cucumis melo HOM05D007067 ORTHO05D008864 2.3e-18 96.7 104 46.2
Lsat_1_v5_gn_5_20880 Lactuca sativa HOM05D007067 ORTHO05D008864 3.0e-18 96.3 106 45.3
Os02g0744000 Oryza sativa ssp. japonica HOM05D007067 ORTHO05D008864 3.0e-18 96.3 106 46.2
Sopen12g016290 Solanum pennellii HOM05D007067 ORTHO05D008864 3.0e-18 96.3 102 42.2
Prupe.5G195500 Prunus persica HOM05D007067 ORTHO05D008864 3.9e-18 95.9 102 46.1
PGR044G1431 Punica granatum HOM05D007067 ORTHO05D008864 3.9e-18 95.9 100 44.0
Zm00001eb254450 Zea mays HOM05D007067 ORTHO05D008864 5.1e-18 95.5 121 43.0
BolC8t51861H Brassica oleracea HOM05D007067 ORTHO05D008864 6.7e-18 95.1 98 46.9
CsaV3_1G002440 Cucumis sativus L. HOM05D007067 ORTHO05D008864 6.7e-18 95.1 104 46.2
MD06G1195600 Malus domestica HOM05D007067 ORTHO05D008864 6.7e-18 95.1 102 46.1
MD14G1202700 Malus domestica HOM05D007067 ORTHO05D008864 6.7e-18 95.1 102 46.1
Atru.chr9.195 Acer truncatum HOM05D007067 ORTHO05D008864 8.7e-18 94.7 100 45.0
Ca_27682_v3 Cicer arietinum L. HOM05D007067 ORTHO05D008864 8.7e-18 94.7 102 44.1
Phvul.009G186200 Phaseolus vulgaris HOM05D007067 ORTHO05D008864 8.7e-18 94.7 102 46.1
Rhsim08G0153200 Rhododendron simsii HOM05D007067 ORTHO05D008864 8.7e-18 94.7 102 44.1
ClCG06G016120 Citrullus lanatus HOM05D007067 ORTHO05D008864 1.1e-17 94.4 104 44.2
Lj1g0007284 Lotus japonicus HOM05D007067 ORTHO05D008864 1.1e-17 94.4 102 44.1
Medtr3g435320 Medicago truncatula HOM05D007067 ORTHO05D008864 1.1e-17 94.4 110 44.5
vmacro17532 Vaccinium macrocarpon HOM05D007067 ORTHO05D008864 1.1e-17 94.4 102 44.1
arahy.Tifrunner.gnm1.ann1.JMB3VF Arachis hypogaea HOM05D007067 ORTHO05D008864 1.5e-17 94.0 102 47.1
arahy.Tifrunner.gnm1.ann1.V8ZK3N Arachis hypogaea HOM05D007067 ORTHO05D008864 1.5e-17 94.0 102 47.1
FAN08G0270 Fragaria x ananassa HOM05D007067 ORTHO05D008864 1.5e-17 94.0 103 45.6
FAN13G0188 Fragaria x ananassa HOM05D007067 ORTHO05D008864 1.5e-17 94.0 103 45.6
FAN18G1220 Fragaria x ananassa HOM05D007067 ORTHO05D008864 1.5e-17 94.0 103 45.6
HanXRQChr05g0156061 Helianthus annuus HOM05D007067 ORTHO05D008864 1.5e-17 94.0 106 44.3
RcHm_v2.0_Chr7g0181701 Rosa chinensis HOM05D007067 ORTHO05D008864 1.5e-17 94.0 103 45.6
Eucgr.K02487 Eucalyptus grandis HOM05D007067 ORTHO05D008864 1.9e-17 93.6 100 44.0
Glyma.04G167400 Glycine max HOM05D007067 ORTHO05D008864 1.9e-17 93.6 100 44.0
CDE09G1053 Ceratophyllum demersum HOM05D007067 ORTHO05D008864 3.3e-17 92.8 89 43.8
Glyma.06G195200 Glycine max HOM05D007067 ORTHO05D008864 3.3e-17 92.8 100 44.0
Cfa018925 Carpinus fangiana HOM05D007067 ORTHO05D008864 4.3e-17 92.4 102 46.1
TPR.G11876 Trifolium pratense HOM05D007067 ORTHO05D008864 4.3e-17 92.4 110 44.5
ECA246G0430 Erigeron canadensis HOM05D007067 ORTHO05D008864 5.7e-17 92.0 107 43.9
Psat5g201280 Pisum sativum HOM05D007067 ORTHO05D008864 1.3e-16 90.9 106 43.4
CiPaw.11G046200 Carya illinoinensis HOM05D007067 ORTHO05D008864 2.1e-16 90.1 100 46.0
Lalb_Chr08g0235641 Lupinus albus HOM05D007067 ORTHO05D008864 2.1e-16 90.1 102 45.1
unitig_0.g778 Utricularia gibba HOM05D007067 ORTHO05D008864 8.2e-16 88.2 103 39.8
SEGI_39094 Sequoiadendron giganteum HOM05D007067 ORTHO05D008864 2.4e-15 86.7 102 47.1
QL10p017305 Quercus lobata HOM05D007067 ORTHO05D008864 3.1e-15 86.3 106 39.6
Eucgr.K02485 Eucalyptus grandis HOM05D007067 ORTHO05D008864 6.9e-15 85.1 159 33.3
AUR62021654 Chenopodium quinoa HOM05D007067 ORTHO05D008864 7.6e-14 81.6 62 48.4
BcaC07g41296 Brassica carinata HOM05D007067 ORTHO05D008864 3.8e-13 79.3 65 46.2
COL.COLO4_28333 Corchorus olitorius HOM05D007067 ORTHO05D008864 1.8e-10 70.5 104 39.4
Rhsim08G0153500 Rhododendron simsii HOM05D007067 ORTHO05D008864 4.1e-07 59.3 63 46.0


User provided reference genes

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