Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0148s0006 Marchantia polymorpha HOM05D005155 ORTHO05D006266 2.3e-138 496.1 371 100.0
AagrBONN_evm.TU.Sc2ySwM_368.2873 Anthoceros agrestis HOM05D005155 ORTHO05D006266 5.5e-31 139.4 193 46.6
SEGI_31719 Sequoiadendron giganteum HOM05D005155 ORTHO05D006266 1.1e-28 131.7 201 42.3
Pp3c22_320 Physcomitrium patens HOM05D005155 ORTHO05D006266 1.8e-26 124.4 185 48.6
Pp3c22_322 Physcomitrium patens HOM05D005155 ORTHO05D006266 1.8e-26 124.4 185 48.6
ATR0225G032 Amborella trichopoda HOM05D005155 ORTHO05D006266 2.5e-23 114.0 220 36.8
Os11g0266000 Oryza sativa ssp. japonica HOM05D005155 ORTHO05D006266 3.2e-23 113.6 173 41.6
Glyma.03G238300 Glycine max HOM05D005155 ORTHO05D006266 1.6e-22 111.3 178 39.3
Gorai.001G190100 Gossypium raimondii HOM05D005155 ORTHO05D006266 2.1e-22 110.9 203 38.4
Lalb_Chr21g0315451 Lupinus albus HOM05D005155 ORTHO05D006266 2.1e-22 110.9 175 40.0
MBI04_g26115_MAGBIO Magnolia biondii HOM05D005155 ORTHO05D006266 2.1e-22 110.9 174 39.7
Solyc05g005730.4 Solanum lycopersicum HOM05D005155 ORTHO05D006266 3.6e-22 110.2 168 38.1
HPP92_009941 Vanilla planifolia HOM05D005155 ORTHO05D006266 3.6e-22 110.2 194 39.2
Ah.08g219720 Amaranthus hybridus HOM05D005155 ORTHO05D006266 4.6e-22 109.8 197 38.1
CAN.G1447.4 Capsicum annuum HOM05D005155 ORTHO05D006266 4.6e-22 109.8 168 37.5
Gohir.D07G170200 Gossypium hirsutum HOM05D005155 ORTHO05D006266 4.6e-22 109.8 201 37.3
Gohir.D11G154600 Gossypium hirsutum HOM05D005155 ORTHO05D006266 4.6e-22 109.8 208 38.5
Gorai.007G164700 Gossypium raimondii HOM05D005155 ORTHO05D006266 4.6e-22 109.8 208 38.5
VMungo0540G1824 Vigna mungo HOM05D005155 ORTHO05D006266 4.6e-22 109.8 176 38.1
Glyma.19G235800 Glycine max HOM05D005155 ORTHO05D006266 6.1e-22 109.4 178 38.8
CANSAT64G2107 Cannabis sativa HOM05D005155 ORTHO05D006266 7.9e-22 109.0 203 37.4
Ah.08g210400 Amaranthus hybridus HOM05D005155 ORTHO05D006266 1.0e-21 108.6 175 40.0
Cpa.g.sc136.55 Carica papaya HOM05D005155 ORTHO05D006266 1.8e-21 107.8 220 37.7
Zm00001eb298370 Zea mays HOM05D005155 ORTHO05D006266 1.8e-21 107.8 180 40.0
Aqoxy3G04181 Aquilegia oxysepala HOM05D005155 ORTHO05D006266 2.3e-21 107.5 175 39.4
Lj4g0024217 Lotus japonicus HOM05D005155 ORTHO05D006266 2.3e-21 107.5 173 40.5
AUR62030994 Chenopodium quinoa HOM05D005155 ORTHO05D006266 5.1e-21 106.3 211 37.9
Sed0007088 Sechium edule HOM05D005155 ORTHO05D006266 5.1e-21 106.3 218 35.8
Eucgr.K01388 Eucalyptus grandis HOM05D005155 ORTHO05D006266 6.7e-21 105.9 175 39.4
PSO210G0096 Papaver somniferum HOM05D005155 ORTHO05D006266 6.7e-21 105.9 212 34.9
Sopen05g001730 Solanum pennellii HOM05D005155 ORTHO05D006266 6.7e-21 105.9 168 37.5
A09p04360 Brassica napus HOM05D005155 ORTHO05D006266 8.8e-21 105.5 210 37.1
Thhalv10004636m.g Eutrema salsugineum HOM05D005155 ORTHO05D006266 8.8e-21 105.5 209 36.8
PGSC0003DMG400004112 Solanum tuberosum HOM05D005155 ORTHO05D006266 8.8e-21 105.5 200 36.5
Carub.0008s0781 Capsella rubella HOM05D005155 ORTHO05D006266 1.1e-20 105.1 204 37.7
Psat7g043480 Pisum sativum HOM05D005155 ORTHO05D006266 1.1e-20 105.1 200 36.5
C09p04670 Brassica napus HOM05D005155 ORTHO05D006266 1.5e-20 104.8 206 36.9
Gohir.A07G163100 Gossypium hirsutum HOM05D005155 ORTHO05D006266 1.5e-20 104.8 201 36.3
HanXRQChr01g0006811 Helianthus annuus HOM05D005155 ORTHO05D006266 1.5e-20 104.8 173 38.2
PSO782G4695 Papaver somniferum HOM05D005155 ORTHO05D006266 1.5e-20 104.8 212 34.4
THA.LOC104819027 Tarenaya hassleriana HOM05D005155 ORTHO05D006266 1.5e-20 104.8 171 39.8
arahy.Tifrunner.gnm1.ann1.FV1RU3 Arachis hypogaea HOM05D005155 ORTHO05D006266 2.0e-20 104.4 202 43.1
Duzib138G0133 Durio zibethinus HOM05D005155 ORTHO05D006266 2.0e-20 104.4 172 40.1
TPR.G3861 Trifolium pratense HOM05D005155 ORTHO05D006266 2.0e-20 104.4 203 34.5
AT5G48240 Arabidopsis thaliana HOM05D005155 ORTHO05D006266 3.3e-20 103.6 202 38.1
Sp2g18610 Schrenkiella parvula HOM05D005155 ORTHO05D006266 3.3e-20 103.6 205 38.0
arahy.Tifrunner.gnm1.ann1.ZBS9GV Arachis hypogaea HOM05D005155 ORTHO05D006266 4.4e-20 103.2 202 42.6
CARHR286520 Cardamine hirsuta HOM05D005155 ORTHO05D006266 4.4e-20 103.2 195 37.9
Phvul.006G092400 Phaseolus vulgaris HOM05D005155 ORTHO05D006266 4.4e-20 103.2 210 34.3
Aa31LG4G7530 Aethionema arabicum HOM05D005155 ORTHO05D006266 5.7e-20 102.8 203 36.5
CARHR218550 Cardamine hirsuta HOM05D005155 ORTHO05D006266 7.4e-20 102.4 195 36.4
PGR044G0745 Punica granatum HOM05D005155 ORTHO05D006266 7.4e-20 102.4 173 38.7
Ca_02017_v3 Cicer arietinum L. HOM05D005155 ORTHO05D006266 9.7e-20 102.1 170 40.0
MELO3C024180.2 Cucumis melo HOM05D005155 ORTHO05D006266 9.7e-20 102.1 216 35.6
Lsat_1_v5_gn_0_13881 Lactuca sativa HOM05D005155 ORTHO05D006266 9.7e-20 102.1 165 39.4
MD09G1131700 Malus domestica HOM05D005155 ORTHO05D006266 9.7e-20 102.1 176 38.1
Thecc.01G199500 Theobroma cacao HOM05D005155 ORTHO05D006266 9.7e-20 102.1 170 38.8
TWI75G0909 Tripterygium wilfordii HOM05D005155 ORTHO05D006266 9.7e-20 102.1 205 39.0
CDE09G0959 Ceratophyllum demersum HOM05D005155 ORTHO05D006266 1.3e-19 101.7 198 37.4
Manes.13G059900 Manihot esculenta HOM05D005155 ORTHO05D006266 1.3e-19 101.7 201 36.3
Cc02_g33980 Coffea canephora HOM05D005155 ORTHO05D006266 1.7e-19 101.3 179 36.9
Haze_24928 Corylus avellana HOM05D005155 ORTHO05D006266 1.7e-19 101.3 209 38.8
CsaV3_7G002370 Cucumis sativus L. HOM05D005155 ORTHO05D006266 1.7e-19 101.3 215 35.8
Duzib211G0098 Durio zibethinus HOM05D005155 ORTHO05D006266 1.7e-19 101.3 172 39.0
FvH4_6g40390 Fragaria vesca HOM05D005155 ORTHO05D006266 1.7e-19 101.3 174 39.7
FAN02G4414 Fragaria x ananassa HOM05D005155 ORTHO05D006266 1.7e-19 101.3 174 39.7
A06p39310 Brassica napus HOM05D005155 ORTHO05D006266 2.8e-19 100.5 206 35.4
ClCG02G003040 Citrullus lanatus HOM05D005155 ORTHO05D006266 2.8e-19 100.5 216 35.2
FAN05G3842 Fragaria x ananassa HOM05D005155 ORTHO05D006266 3.7e-19 100.1 174 39.1
AL8G20970 Arabidopsis lyrata HOM05D005155 ORTHO05D006266 4.8e-19 99.8 205 36.6
Nitab4.5_0004941g0060 Nicotiana tabacum HOM05D005155 ORTHO05D006266 4.8e-19 99.8 205 36.1
Prupe.3G194600 Prunus persica HOM05D005155 ORTHO05D006266 4.8e-19 99.8 224 34.8
C07p38970 Brassica napus HOM05D005155 ORTHO05D006266 6.3e-19 99.4 201 34.8
Nitab4.5_0003086g0050 Nicotiana tabacum HOM05D005155 ORTHO05D006266 6.3e-19 99.4 202 35.6
RcHm_v2.0_Chr2g0155591 Rosa chinensis HOM05D005155 ORTHO05D006266 6.3e-19 99.4 174 40.2
FAN09G4460 Fragaria x ananassa HOM05D005155 ORTHO05D006266 1.1e-18 98.6 201 38.3
Atru.chr6.3431 Acer truncatum HOM05D005155 ORTHO05D006266 1.4e-18 98.2 200 36.5
Oeu022053.1 Olea europaea HOM05D005155 ORTHO05D006266 1.4e-18 98.2 194 35.1
THA.LOC104802634 Tarenaya hassleriana HOM05D005155 ORTHO05D006266 1.4e-18 98.2 209 35.9
Potri.014G170500 Populus trichocarpa HOM05D005155 ORTHO05D006266 1.8e-18 97.8 200 36.5
COL.COLO4_19654 Corchorus olitorius HOM05D005155 ORTHO05D006266 2.4e-18 97.4 201 34.8
CBR_g23113 Chara braunii HOM05D005155 ORTHO05D006266 4.1e-18 96.7 195 33.8
Dinv21322 Davidia involucrata HOM05D005155 ORTHO05D006266 4.1e-18 96.7 174 38.5
BolC9t53395H Brassica oleracea HOM05D005155 ORTHO05D006266 5.3e-18 96.3 238 32.8
CiPaw.04G197900 Carya illinoinensis HOM05D005155 ORTHO05D006266 5.3e-18 96.3 214 36.9
CAN.G715.5 Capsicum annuum HOM05D005155 ORTHO05D006266 6.9e-18 95.9 164 34.8
Ciclev10015959m.g Citrus clementina HOM05D005155 ORTHO05D006266 1.2e-17 95.1 205 36.1
Actinidia20617 Actinidia chinensis HOM05D005155 ORTHO05D006266 1.5e-17 94.7 213 34.3
Cfa014201 Carpinus fangiana HOM05D005155 ORTHO05D006266 2.0e-17 94.4 203 36.5
Rhsim04G0007200 Rhododendron simsii HOM05D005155 ORTHO05D006266 2.0e-17 94.4 206 37.9
BraA09t36073Z Brassica rapa HOM05D005155 ORTHO05D006266 3.4e-17 93.6 243 31.7
Haze_12586 Corylus avellana HOM05D005155 ORTHO05D006266 3.4e-17 93.6 195 37.4
GSVIVG01030126001 Vitis vinifera HOM05D005155 ORTHO05D006266 3.4e-17 93.6 217 32.7
Dinv05324 Davidia involucrata HOM05D005155 ORTHO05D006266 5.9e-17 92.8 208 33.2
Actinidia24711 Actinidia chinensis HOM05D005155 ORTHO05D006266 7.7e-17 92.4 208 35.1
Hma1.2p1_0629F.1_g192150 Hydrangea macrophylla HOM05D005155 ORTHO05D006266 7.7e-17 92.4 204 35.8
DCAR_021083 Daucus carota HOM05D005155 ORTHO05D006266 2.2e-16 90.9 206 36.4
unitig_26.g9470 Utricularia gibba HOM05D003767 ORTHO05D004507 2.9e-16 90.5 208 33.2
Actinidia20603 Actinidia chinensis HOM05D005155 ORTHO05D006266 3.8e-16 90.1 211 34.1
BcaC04g23785 Brassica carinata HOM05D005155 ORTHO05D006266 6.5e-16 89.4 208 34.1
TPR.G35685 Trifolium pratense HOM05D005155 ORTHO05D006266 8.5e-16 89.0 206 33.0
CSS0035525 Camellia sinensis var. sinensis HOM05D005155 ORTHO05D006266 1.4e-15 88.2 209 33.5
ECA248G0062 Erigeron canadensis HOM05D005155 ORTHO05D006266 1.9e-15 87.8 169 33.7
Sc20g0004590 Simmondsia chinensis HOM05D005155 ORTHO05D006266 1.9e-15 87.8 215 32.6
BcaB04g19566 Brassica carinata HOM05D005155 ORTHO05D006266 7.2e-15 85.9 211 32.7
BraA06t26845Z Brassica rapa HOM05D005155 ORTHO05D006266 7.2e-15 85.9 244 29.9
EL10Ac5g10791 Beta vulgaris HOM05D005155 ORTHO05D006266 1.2e-14 85.1 214 34.6
Migut.M00065 Erythranthe guttata HOM05D005155 ORTHO05D006266 1.2e-14 85.1 205 33.2
FAN14G3535 Fragaria x ananassa HOM05D005155 ORTHO05D006266 2.1e-14 84.3 197 34.0
SalBow7G0407 Salvia bowleyana HOM05D005155 ORTHO05D006266 2.7e-14 84.0 149 36.2
CSS0023894 Camellia sinensis var. sinensis HOM05D005155 ORTHO05D006266 3.6e-14 83.6 204 32.4
BcaC06g30816 Brassica carinata HOM05D005155 ORTHO05D006266 1.4e-13 81.6 202 33.2
TAR629G2368 Trochodendron aralioides HOM05D005155 ORTHO05D006266 2.3e-13 80.9 230 32.6
Gohir.A11G147700 Gossypium hirsutum HOM05D005155 ORTHO05D006266 2.0e-12 77.8 208 32.2
Peaxi162Scf00359g00214 Petunia axillaris HOM05D005155 ORTHO05D006266 1.3e-11 75.1 206 31.6
BolC7t44418H Brassica oleracea HOM05D005155 ORTHO05D006266 2.2e-11 74.3 154 36.4
Nn3g19477 Nelumbo nucifera HOM05D005155 ORTHO05D006266 5.3e-10 69.7 169 30.2
MD17G1119200 Malus domestica HOM05D005155 ORTHO05D006266 9.1e-10 68.9 112 40.2
PSO782G5585 Papaver somniferum HOM05D005155 ORTHO05D006266 1.2e-09 68.6 155 36.1
Cc00_g18660 Coffea canephora HOM05D005155 ORTHO05D006266 1.6e-09 68.2 118 39.0
Psat5g216800 Pisum sativum HOM05D005155 ORTHO05D006266 1.6e-09 68.2 141 39.0
MSTRG.6620 Avicennia marina HOM05D005155 ORTHO05D006266 2.6e-09 67.4 145 36.6
PRCOL_00000835 Prasinoderma coloniale HOM05D005155 ORTHO05D006266 7.7e-09 65.9 122 35.2
CiPaw.03G283900 Carya illinoinensis HOM05D005155 ORTHO05D006266 1.7e-08 64.7 122 36.1
Cc00_g14350 Coffea canephora HOM05D005155 ORTHO05D006266 5.5e-07 59.7 108 38.0
QL04p067008 Quercus lobata HOM05D005155 ORTHO05D006266 7.2e-07 59.3 154 34.4
Lj1A800T38 Lonicera japonica HOM05D005155 ORTHO05D006266 9.4e-07 58.9 76 47.4
QL01p014609 Quercus lobata HOM05D005155 ORTHO05D006266 9.4e-07 58.9 91 40.7
Cc07_g20190 Coffea canephora HOM05D005155 ORTHO05D006266 2.7e-06 57.4 108 37.0
Nn1g02050 Nelumbo nucifera HOM05D005155 ORTHO05D006266 2.7e-06 57.4 201 30.8
SGA_v2.0_scaffold181G39700 Striga asiatica HOM05D005155 ORTHO05D006266 4.7e-06 56.6 268 25.7


User provided reference genes

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