Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0147s0035 Marchantia polymorpha HOM05D007669 ORTHO05D009624 0.0e+00 1770.4 881 100.0
AagrBONN_evm.TU.Sc2ySwM_117.3295 Anthoceros agrestis HOM05D007669 ORTHO05D009624 1.5e-90 338.6 850 30.8
SEGI_13081 Sequoiadendron giganteum HOM05D007669 ORTHO05D009624 1.6e-73 282.0 590 34.4
ATR0580G240 Amborella trichopoda HOM05D007669 ORTHO05D009624 2.3e-72 278.1 859 26.9
SGA_v2.0_scaffold17G07944 Striga asiatica HOM05D007669 ORTHO05D009624 1.3e-70 272.3 863 27.9
Dinv25484 Davidia involucrata HOM05D007669 ORTHO05D009624 4.1e-69 267.3 872 27.2
SalBow1G4073 Salvia bowleyana HOM05D007669 ORTHO05D009624 2.1e-68 265.0 851 27.0
HanXRQChr09g0244441 Helianthus annuus HOM05D007669 ORTHO05D009624 3.5e-68 264.2 830 26.9
Nn8g40420 Nelumbo nucifera HOM05D007669 ORTHO05D009624 4.6e-68 263.8 893 26.7
Zm00001eb432590 Zea mays HOM05D007669 ORTHO05D009624 8.6e-67 259.6 834 26.6
Pp3c9_5530 Physcomitrium patens HOM05D007669 ORTHO05D009624 4.3e-66 257.3 842 28.1
Rhsim01G0007900 Rhododendron simsii HOM05D007669 ORTHO05D009624 4.3e-66 257.3 845 27.3
CANSAT11G2077 Cannabis sativa HOM05D007669 ORTHO05D009624 3.6e-65 254.2 844 26.2
Migut.K00227 Erythranthe guttata HOM05D007669 ORTHO05D009624 4.7e-65 253.8 865 25.0
Ciclev10007518m.g Citrus clementina HOM05D007669 ORTHO05D009624 3.1e-64 251.1 870 26.8
Cfa013482 Carpinus fangiana HOM05D007669 ORTHO05D009624 6.8e-64 250.0 841 27.2
PSO170G1866 Papaver somniferum HOM05D007669 ORTHO05D009624 6.8e-64 250.0 836 25.8
Lsat_1_v5_gn_7_54021 Lactuca sativa HOM05D007669 ORTHO05D009624 1.2e-63 249.2 679 29.0
Sabra18G0113000 Salix brachista HOM05D007669 ORTHO05D009624 1.5e-63 248.8 870 27.2
PSO063G2993 Papaver somniferum HOM05D007669 ORTHO05D009624 2.0e-63 248.4 836 26.1
Potri.018G133300 Populus trichocarpa HOM05D007669 ORTHO05D009624 2.0e-63 248.4 866 27.0
Hund06703 Selenicereus undatus HOM05D007669 ORTHO05D009624 3.4e-63 247.7 897 26.1
TWI34G1867 Tripterygium wilfordii HOM05D007669 ORTHO05D009624 9.9e-63 246.1 874 26.9
AUR62031310 Chenopodium quinoa HOM05D007669 ORTHO05D009624 1.3e-62 245.7 843 26.8
TPR.G5403 Trifolium pratense HOM05D007669 ORTHO05D009624 1.3e-62 245.7 863 25.5
Aqoxy7G02932 Aquilegia oxysepala HOM05D007669 ORTHO05D009624 8.4e-62 243.0 913 26.5
MD13G1236300 Malus domestica HOM05D007669 ORTHO05D009624 8.4e-62 243.0 877 26.1
Lalb_Chr07g0180781 Lupinus albus HOM05D007669 ORTHO05D009624 1.4e-61 242.3 839 27.3
Gohir.D05G246300 Gossypium hirsutum HOM05D007669 ORTHO05D009624 4.1e-61 240.7 846 26.4
GSVIVG01029262001 Vitis vinifera HOM05D007669 ORTHO05D009624 5.4e-61 240.4 897 27.6
HPP92_010780 Vanilla planifolia HOM05D007669 ORTHO05D009624 7.1e-61 240.0 607 29.0
Cc06_g12900 Coffea canephora HOM05D007669 ORTHO05D009624 1.2e-60 239.2 863 26.2
SMO356G0293 Selaginella moellendorffii HOM05D007669 ORTHO05D009624 1.2e-60 239.2 480 35.4
ClCG06G013870 Citrullus lanatus HOM05D007669 ORTHO05D009624 2.1e-60 238.4 835 25.5
Gorai.009G262500 Gossypium raimondii HOM05D007669 ORTHO05D009624 2.1e-60 238.4 846 26.0
Oeu025206.1 Olea europaea HOM05D007669 ORTHO05D009624 2.1e-60 238.4 837 25.9
Ca_21270_v3 Cicer arietinum L. HOM05D007669 ORTHO05D009624 5.1e-59 233.8 888 26.2
Lj4g0015120 Lotus japonicus HOM05D007669 ORTHO05D009624 1.1e-58 232.6 865 25.2
arahy.Tifrunner.gnm1.ann1.BQQL35 Arachis hypogaea HOM05D007669 ORTHO05D009624 4.3e-58 230.7 865 25.3
PGR044G0001 Punica granatum HOM05D007669 ORTHO05D009624 4.3e-58 230.7 883 24.2
QL11p009976 Quercus lobata HOM05D007669 ORTHO05D009624 4.3e-58 230.7 579 29.7
arahy.Tifrunner.gnm1.ann1.YI9GDS Arachis hypogaea HOM05D007669 ORTHO05D009624 9.6e-58 229.6 882 25.2
Phvul.003G138500 Phaseolus vulgaris HOM05D007669 ORTHO05D009624 1.2e-57 229.2 864 25.1
Manes.14G174400 Manihot esculenta HOM05D007669 ORTHO05D009624 3.6e-57 227.6 839 26.6
EL10Ac8g19326 Beta vulgaris HOM05D007669 ORTHO05D009624 8.1e-57 226.5 895 25.1
Prupe.1G068100 Prunus persica HOM05D007669 ORTHO05D009624 8.1e-57 226.5 691 26.9
Medtr4g126780 Medicago truncatula HOM05D007669 ORTHO05D009624 1.1e-56 226.1 834 24.9
Sed0018351 Sechium edule HOM05D007669 ORTHO05D009624 1.4e-56 225.7 875 24.7
Gohir.A05G248100 Gossypium hirsutum HOM05D007669 ORTHO05D009624 8.9e-56 223.0 849 26.1
SEGI_05703 Sequoiadendron giganteum HOM05D007669 ORTHO05D009624 8.9e-56 223.0 486 31.9
Duzib177G0349 Durio zibethinus HOM05D007669 ORTHO05D009624 3.4e-55 221.1 702 27.8
vmacro13101 Vaccinium macrocarpon HOM05D007669 ORTHO05D009624 3.4e-55 221.1 828 27.8
Eucgr.D01099 Eucalyptus grandis HOM05D007669 ORTHO05D009624 2.9e-54 218.0 621 27.9
FAN07G2841 Fragaria x ananassa HOM05D007669 ORTHO05D009624 4.9e-54 217.2 844 26.2
Sc13g0008100 Simmondsia chinensis HOM05D007669 ORTHO05D009624 8.4e-54 216.5 860 25.0
Ah.09g232160 Amaranthus hybridus HOM05D007669 ORTHO05D009624 1.4e-53 215.7 894 24.5
FvH4_4g06530 Fragaria vesca HOM05D007669 ORTHO05D009624 4.2e-53 214.2 591 29.8
FAN17G0559 Fragaria x ananassa HOM05D007669 ORTHO05D009624 5.4e-53 213.8 845 26.0
RcHm_v2.0_Chr4g0398451 Rosa chinensis HOM05D007669 ORTHO05D009624 2.1e-52 211.8 593 28.5
FAN22G2123 Fragaria x ananassa HOM05D007669 ORTHO05D009624 3.9e-51 207.6 591 29.4
Cpa.g.sc115.51 Carica papaya HOM05D007669 ORTHO05D009624 1.5e-50 205.7 680 26.6
AUR62027394 Chenopodium quinoa HOM05D007669 ORTHO05D009624 2.8e-49 201.4 487 31.0
ECA240G0205 Erigeron canadensis HOM05D007669 ORTHO05D009624 1.1e-48 199.5 512 28.9
Eucgr.L01386 Eucalyptus grandis HOM05D007669 ORTHO05D009624 2.2e-46 191.8 500 29.4
VMungo1215G2771 Vigna mungo HOM05D007669 ORTHO05D009624 1.1e-45 189.5 550 26.4
CiPaw.08G030700 Carya illinoinensis HOM05D007669 ORTHO05D009624 2.4e-45 188.3 687 26.9
Glyma.17G056500 Glycine max HOM05D007669 ORTHO05D009624 2.4e-45 188.3 520 28.3
MBI16_g09333_MAGBIO Magnolia biondii HOM05D007669 ORTHO05D009624 5.4e-45 187.2 501 28.5
MELO3C017409.2 Cucumis melo HOM05D007669 ORTHO05D009624 2.7e-44 184.9 583 28.0
Psat4g013920 Pisum sativum HOM05D007669 ORTHO05D009624 6.0e-44 183.7 553 27.1
CsaV3_1G032070 Cucumis sativus L. HOM05D007669 ORTHO05D009624 1.0e-43 183.0 380 32.6
Hma1.2p1_0726F.1_g208990 Hydrangea macrophylla HOM05D007669 ORTHO05D009624 1.6e-41 175.6 379 31.1
Lj2g0020468 Lotus japonicus HOM05D007669 ORTHO05D009624 8.4e-38 163.3 869 23.2
Glyma.13G102601 Glycine max HOM05D007669 ORTHO05D009624 3.0e-35 154.8 221 38.9
CDE02G1706 Ceratophyllum demersum HOM05D007669 ORTHO05D009624 5.6e-34 150.6 523 26.0
DCAR_017992 Daucus carota HOM05D007669 ORTHO05D009624 2.4e-32 145.2 137 54.0
Psat7g062600 Pisum sativum HOM05D007669 ORTHO05D009624 5.9e-23 114.0 133 44.4
Cre07.g356600 Chlamydomonas reinhardtii HOM05D007669 ORTHO05D009624 3.1e-16 91.7 191 36.6
Eucgr.D01111 Eucalyptus grandis HOM05D007669 ORTHO05D009624 6.9e-16 90.5 253 29.6
FAN12G2799 Fragaria x ananassa HOM05D007669 ORTHO05D009624 6.9e-16 90.5 248 29.8
PRCOL_00001814 Prasinoderma coloniale HOM05D007669 ORTHO05D009624 1.1e-13 83.2 195 30.8
MCO10G383 Micromonas commoda HOM05D024043 ORTHO05D009624 1.9e-13 82.4 152 33.6
AagrBONN_evm.TU.Sc2ySwM_369.230 Anthoceros agrestis HOM05D024043 ORTHO05D031244 2.3e-11 75.5 170 30.6
PRCOL_00006584 Prasinoderma coloniale HOM05D024043 ORTHO05D009624 1.5e-10 72.8 124 38.7
DCAR_017991 Daucus carota HOM05D007669 ORTHO05D009624 7.4e-10 70.5 234 23.9
Pp3c25_1540 Physcomitrium patens HOM05D024043 ORTHO05D031244 1.3e-09 69.7 142 30.3
Eucgr.D01101 Eucalyptus grandis HOM05D007669 ORTHO05D009624 5.3e-08 64.3 176 28.4
Mapoly0004s0046 Marchantia polymorpha HOM05D024043 ORTHO05D031244 1.5e-07 62.8 86 37.2
Haze_22064 Corylus avellana HOM05D007669 ORTHO05D009624 6.5e-06 57.4 231 24.2


User provided reference genes

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