Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0147s0029 Marchantia polymorpha HOM05D006977 ORTHO05D008738 6.0e-92 340.9 179 100.0
Pp3c20_22530 Physcomitrium patens HOM05D006977 ORTHO05D008738 1.5e-26 123.6 192 41.7
Rhsim01G0293500 Rhododendron simsii HOM05D006977 ORTHO05D008738 1.3e-14 84.0 128 38.3
PSO170G4516 Papaver somniferum HOM05D006977 ORTHO05D008738 5.0e-14 82.0 127 39.4
ATR0796G043 Amborella trichopoda HOM05D006977 ORTHO05D008738 6.5e-14 81.6 180 32.2
PSO357G0421 Papaver somniferum HOM05D006977 ORTHO05D008738 6.5e-14 81.6 127 38.6
PGR042G1466 Punica granatum HOM05D006977 ORTHO05D008738 6.5e-14 81.6 127 40.9
MBI19_g30288_MAGBIO Magnolia biondii HOM05D006977 ORTHO05D008738 1.9e-13 80.1 128 37.5
Actinidia25872 Actinidia chinensis HOM05D006977 ORTHO05D008738 2.5e-13 79.7 127 37.8
Sed0019401 Sechium edule HOM05D006977 ORTHO05D008738 2.5e-13 79.7 176 33.5
Dinv12080 Davidia involucrata HOM05D006977 ORTHO05D008738 4.2e-13 79.0 159 35.2
ClCG01G007180 Citrullus lanatus HOM05D006977 ORTHO05D008738 5.5e-13 78.6 170 32.9
Duzib133G0680 Durio zibethinus HOM05D006977 ORTHO05D008738 5.5e-13 78.6 127 40.2
HPP92_012764 Vanilla planifolia HOM05D006977 ORTHO05D008738 7.2e-13 78.2 127 39.4
Sc02g0004000 Simmondsia chinensis HOM05D006977 ORTHO05D008738 1.6e-12 77.0 148 33.8
MSTRG.6995 Avicennia marina HOM05D006977 ORTHO05D008738 2.1e-12 76.6 166 31.3
COL.COLO4_23128 Corchorus olitorius HOM05D006977 ORTHO05D008738 2.1e-12 76.6 127 37.8
CSS0050251 Camellia sinensis var. sinensis HOM05D006977 ORTHO05D008738 3.6e-12 75.9 127 37.8
CsaV3_5G018620 Cucumis sativus L. HOM05D006977 ORTHO05D008738 3.6e-12 75.9 171 34.5
Duzib268G1378 Durio zibethinus HOM05D006977 ORTHO05D008738 3.6e-12 75.9 127 39.4
Cpa.g.sc57.16 Carica papaya HOM05D006977 ORTHO05D008738 4.7e-12 75.5 127 40.9
Nn4g24845 Nelumbo nucifera HOM05D006977 ORTHO05D008738 4.7e-12 75.5 128 37.5
Os07g0636400 Oryza sativa ssp. japonica HOM05D006977 ORTHO05D008738 4.7e-12 75.5 172 35.5
THA.LOC104799825 Tarenaya hassleriana HOM05D006977 ORTHO05D008738 4.7e-12 75.5 126 34.9
Zm00001eb328690 Zea mays HOM05D006977 ORTHO05D008738 6.1e-12 75.1 128 35.9
HanXRQChr15g0493961 Helianthus annuus HOM05D006977 ORTHO05D008738 8.0e-12 74.7 127 39.4
MELO3C005192.2 Cucumis melo HOM05D006977 ORTHO05D008738 1.4e-11 73.9 177 32.2
Duzib268G1723 Durio zibethinus HOM05D006977 ORTHO05D008738 1.8e-11 73.6 126 38.9
Duzib268G1823 Durio zibethinus HOM05D006977 ORTHO05D008738 1.8e-11 73.6 126 38.9
Lj5g0006261 Lotus japonicus HOM05D006977 ORTHO05D008738 1.8e-11 73.6 128 36.7
Sabra14G0082500 Salix brachista HOM05D006977 ORTHO05D008738 1.8e-11 73.6 158 36.1
Gohir.D11G109500 Gossypium hirsutum HOM05D006977 ORTHO05D008738 2.3e-11 73.2 127 39.4
Gorai.007G117100 Gossypium raimondii HOM05D006977 ORTHO05D008738 2.3e-11 73.2 127 39.4
Aqoxy5G02822 Aquilegia oxysepala HOM05D006977 ORTHO05D008738 4.0e-11 72.4 129 34.1
ECA236G2063 Erigeron canadensis HOM05D006977 ORTHO05D008738 4.0e-11 72.4 127 36.2
Eucgr.A01003 Eucalyptus grandis HOM05D006977 ORTHO05D008738 4.0e-11 72.4 128 37.5
RcHm_v2.0_Chr3g0485771 Rosa chinensis HOM05D006977 ORTHO05D008738 4.0e-11 72.4 168 32.1
Migut.M01655 Erythranthe guttata HOM05D006977 ORTHO05D008738 5.2e-11 72.0 160 33.8
FAN23G2129 Fragaria x ananassa HOM05D006977 ORTHO05D008738 5.2e-11 72.0 176 30.7
FAN26G0658 Fragaria x ananassa HOM05D006977 ORTHO05D008738 6.8e-11 71.6 181 30.4
Prupe.3G002600 Prunus persica HOM05D006977 ORTHO05D008738 6.8e-11 71.6 176 31.8
vmacro15094 Vaccinium macrocarpon HOM05D006977 ORTHO05D008738 6.8e-11 71.6 129 35.7
FAN28G2841 Fragaria x ananassa HOM05D006977 ORTHO05D008738 8.8e-11 71.2 177 29.9
Lsat_1_v5_gn_7_107761 Lactuca sativa HOM05D006977 ORTHO05D008738 8.8e-11 71.2 177 33.3
Thecc.01G325400 Theobroma cacao HOM05D006977 ORTHO05D008738 8.8e-11 71.2 127 37.0
GSVIVG01028248001 Vitis vinifera HOM05D006977 ORTHO05D008738 8.8e-11 71.2 127 39.4
AL6G51510 Arabidopsis lyrata HOM05D006977 ORTHO05D008738 1.2e-10 70.9 129 38.0
arahy.Tifrunner.gnm1.ann1.KP3I1I Arachis hypogaea HOM05D006977 ORTHO05D008738 1.2e-10 70.9 167 33.5
Glyma.10G137900 Glycine max HOM05D006977 ORTHO05D008738 1.2e-10 70.9 130 35.4
Gohir.A11G104700 Gossypium hirsutum HOM05D006977 ORTHO05D008738 1.2e-10 70.9 127 38.6
Manes.05G008900 Manihot esculenta HOM05D006977 ORTHO05D008738 1.2e-10 70.9 127 37.8
QL05p057365 Quercus lobata HOM05D006977 ORTHO05D008738 1.2e-10 70.9 126 37.3
Atru.chr5.861 Acer truncatum HOM05D006977 ORTHO05D008738 1.5e-10 70.5 127 34.6
AUR62020194 Chenopodium quinoa HOM05D006977 ORTHO05D008738 1.5e-10 70.5 127 36.2
Cc04_g01560 Coffea canephora HOM05D006977 ORTHO05D008738 1.5e-10 70.5 163 35.6
Haze_05149 Corylus avellana HOM05D006977 ORTHO05D008738 1.5e-10 70.5 161 34.2
FAN19G2776 Fragaria x ananassa HOM05D006977 ORTHO05D008738 1.5e-10 70.5 176 29.5
Glyma.04G053700 Glycine max HOM05D006977 ORTHO05D008738 1.5e-10 70.5 169 32.5
arahy.Tifrunner.gnm1.ann1.PT1J72 Arachis hypogaea HOM05D006977 ORTHO05D008738 2.0e-10 70.1 116 38.8
Cfa004914 Carpinus fangiana HOM05D006977 ORTHO05D008738 2.0e-10 70.1 161 34.2
Ca_17328_v3 Cicer arietinum L. HOM05D006977 ORTHO05D008738 2.0e-10 70.1 128 33.6
Psat7g015240 Pisum sativum HOM05D006977 ORTHO05D008738 2.0e-10 70.1 128 34.4
Potri.014G112200 Populus trichocarpa HOM05D006977 ORTHO05D008738 2.0e-10 70.1 151 35.1
Lj1A7G42 Lonicera japonica HOM05D006977 ORTHO05D008738 2.6e-10 69.7 118 35.6
Ciclev10022352m.g Citrus clementina HOM05D006977 ORTHO05D008738 3.4e-10 69.3 163 33.1
TWI81G0461 Tripterygium wilfordii HOM05D006977 ORTHO05D008738 3.4e-10 69.3 166 32.5
Lalb_Chr11g0071671 Lupinus albus HOM05D006977 ORTHO05D008738 4.4e-10 68.9 128 38.3
Cpa.g.sc112.76 Carica papaya HOM05D006977 ORTHO05D008738 5.7e-10 68.6 127 37.8
AUR62007556 Chenopodium quinoa HOM05D006977 ORTHO05D008738 5.7e-10 68.6 127 34.6
MD09G1290400 Malus domestica HOM05D006977 ORTHO05D008738 5.7e-10 68.6 166 31.9
Medtr8g103265 Medicago truncatula HOM05D006977 ORTHO05D008738 5.7e-10 68.6 128 33.6
Phvul.L002843 Phaseolus vulgaris HOM05D006977 ORTHO05D008738 5.7e-10 68.6 131 32.1
TAR362G0624 Trochodendron aralioides HOM05D006977 ORTHO05D008738 5.7e-10 68.6 128 35.2
VMungo0720G2811 Vigna mungo HOM05D006977 ORTHO05D008738 7.5e-10 68.2 129 34.9
Hma1.2p1_0484F.1_g162990 Hydrangea macrophylla HOM05D006977 ORTHO05D008738 9.8e-10 67.8 162 32.1
Oeu031543.1 Olea europaea HOM05D006977 ORTHO05D008738 9.8e-10 67.8 130 33.8
Sp3g31270 Schrenkiella parvula HOM05D006977 ORTHO05D008738 9.8e-10 67.8 129 35.7
SpUn0082_0020 Schrenkiella parvula HOM05D006977 ORTHO05D008738 9.8e-10 67.8 129 35.7
CARHR249760 Cardamine hirsuta HOM05D006977 ORTHO05D008738 1.3e-09 67.4 129 36.4
FvH4_1g26230 Fragaria vesca HOM05D006977 ORTHO05D008738 1.3e-09 67.4 127 33.9
C03p38480 Brassica napus HOM05D006977 ORTHO05D008738 1.7e-09 67.0 129 35.7
Sp6g01640 Schrenkiella parvula HOM05D006977 ORTHO05D008738 1.7e-09 67.0 122 37.7
BcaB01g02378 Brassica carinata HOM05D006977 ORTHO05D008738 2.2e-09 66.6 129 34.1
TPR.G23504 Trifolium pratense HOM05D006977 ORTHO05D008738 2.2e-09 66.6 124 33.1
BcaC01g06803 Brassica carinata HOM05D006977 ORTHO05D008738 2.8e-09 66.2 129 35.7
BolC3t16121H Brassica oleracea HOM05D006977 ORTHO05D008738 2.8e-09 66.2 129 35.7
Carub.0006s3543 Capsella rubella HOM05D006977 ORTHO05D008738 4.9e-09 65.5 124 37.1
CiPaw.08G082500 Carya illinoinensis HOM05D006977 ORTHO05D008738 4.9e-09 65.5 175 33.1
EL10Ac6g15579 Beta vulgaris HOM05D006977 ORTHO05D008738 8.3e-09 64.7 128 32.8
Sopen01g030650 Solanum pennellii HOM05D006977 ORTHO05D008738 8.3e-09 64.7 121 34.7
DCAR_012297 Daucus carota HOM05D006977 ORTHO05D008738 1.1e-08 64.3 127 33.1
Hund02455 Selenicereus undatus HOM05D006977 ORTHO05D008738 2.4e-08 63.2 169 29.6
PGSC0003DMG400001120 Solanum tuberosum HOM05D006977 ORTHO05D008738 2.4e-08 63.2 123 34.1
A03p31490 Brassica napus HOM05D006977 ORTHO05D008738 3.1e-08 62.8 129 34.9
BraA03t12329Z Brassica rapa HOM05D006977 ORTHO05D008738 3.1e-08 62.8 129 34.9
Solyc01g080830.3 Solanum lycopersicum HOM05D006977 ORTHO05D008738 3.1e-08 62.8 121 34.7
Nitab4.5_0003092g0050 Nicotiana tabacum HOM05D006977 ORTHO05D008738 9.1e-08 61.2 154 29.9
unitig_8.g4039 Utricularia gibba HOM05D006977 ORTHO05D008738 9.1e-08 61.2 123 34.1
AT4G01790 Arabidopsis thaliana HOM05D006977 ORTHO05D008738 1.2e-07 60.8 129 31.8
CAN.G100.60 Capsicum annuum HOM05D006977 ORTHO05D008738 1.2e-07 60.8 120 34.2
Peaxi162Scf00309g00082 Petunia axillaris HOM05D006977 ORTHO05D008738 1.6e-07 60.5 120 32.5
SalBow5G4120 Salvia bowleyana HOM05D006977 ORTHO05D008738 2.7e-07 59.7 116 34.5
Thhalv10029024m.g Eutrema salsugineum HOM05D006977 ORTHO05D008738 1.3e-06 57.4 149 32.9
Nitab4.5_0000222g0410 Nicotiana tabacum HOM05D006977 ORTHO05D008738 1.3e-06 57.4 107 34.6
SGA_v2.0_scaffold204G41642 Striga asiatica HOM05D006977 ORTHO05D008738 2.9e-06 56.2 101 35.6
CDE02G1393 Ceratophyllum demersum HOM05D006977 ORTHO05D008738 6.6e-06 55.1 75 36.0


User provided reference genes

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