Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0147s0022 Marchantia polymorpha HOM05D007372 ORTHO05D009318 2.9e-154 548.5 277 100.0
PSO675G2246 Papaver somniferum HOM05D007372 ORTHO05D009318 6.8e-18 95.5 146 39.7
CsaV3_6G004890 Cucumis sativus L. HOM05D007372 ORTHO05D009318 2.6e-17 93.6 151 39.1
Dinv02471 Davidia involucrata HOM05D007372 ORTHO05D009318 2.6e-17 93.6 186 35.5
Migut.C00154 Erythranthe guttata HOM05D007372 ORTHO05D009318 4.4e-17 92.8 154 37.7
BraA07t31356Z Brassica rapa HOM05D007372 ORTHO05D009318 7.5e-17 92.0 165 36.4
PSO541G3596 Papaver somniferum HOM05D007372 ORTHO05D009318 7.5e-17 92.0 151 37.1
Nn5g28866 Nelumbo nucifera HOM05D007372 ORTHO05D009318 9.8e-17 91.7 142 39.4
Sed0016879 Sechium edule HOM05D007372 ORTHO05D009318 1.3e-16 91.3 142 36.6
VMungo0464G0612 Vigna mungo HOM05D007372 ORTHO05D009318 1.3e-16 91.3 124 42.7
Psat0ss32450g0040 Pisum sativum HOM05D007372 ORTHO05D009318 1.7e-16 90.9 156 36.5
unitig_46.g18009 Utricularia gibba HOM05D007372 ORTHO05D009318 2.2e-16 90.5 145 40.0
MSTRG.969 Avicennia marina HOM05D007372 ORTHO05D009318 8.3e-16 88.6 110 43.6
Aa31LG4G8880 Aethionema arabicum HOM05D007372 ORTHO05D009318 1.1e-15 88.2 186 32.3
Phvul.004G088900 Phaseolus vulgaris HOM05D007372 ORTHO05D009318 1.1e-15 88.2 164 35.4
AagrBONN_evm.TU.Sc2ySwM_117.786 Anthoceros agrestis HOM05D007372 ORTHO05D009318 1.4e-15 87.8 168 36.3
AL2G31330 Arabidopsis lyrata HOM05D007372 ORTHO05D009318 1.4e-15 87.8 149 35.6
ClCG08G007220 Citrullus lanatus HOM05D007372 ORTHO05D009318 1.8e-15 87.4 152 38.2
arahy.Tifrunner.gnm1.ann1.1F4W04 Arachis hypogaea HOM05D007372 ORTHO05D009318 3.1e-15 86.7 113 41.6
AT1G71760 Arabidopsis thaliana HOM05D007372 ORTHO05D009318 4.1e-15 86.3 172 35.5
arahy.Tifrunner.gnm1.ann1.CL5RXG Arachis hypogaea HOM05D007372 ORTHO05D009318 4.1e-15 86.3 112 42.0
Nitab4.5_0007403g0010 Nicotiana tabacum HOM05D007372 ORTHO05D009318 5.4e-15 85.9 150 38.7
BcaC08g46602 Brassica carinata HOM05D007372 ORTHO05D009318 7.0e-15 85.5 175 34.3
Eucgr.F02675 Eucalyptus grandis HOM05D007372 ORTHO05D009318 7.0e-15 85.5 174 38.5
Manes.02G185100 Manihot esculenta HOM05D007372 ORTHO05D009318 7.0e-15 85.5 189 36.0
Carub.0002s1852 Capsella rubella HOM05D007372 ORTHO05D009318 9.2e-15 85.1 192 31.2
Potri.002G062800 Populus trichocarpa HOM05D007372 ORTHO05D009318 1.2e-14 84.7 196 34.2
ECA232G4628 Erigeron canadensis HOM05D007372 ORTHO05D009318 1.6e-14 84.3 237 28.3
Lsat_1_v5_gn_9_42440 Lactuca sativa HOM05D007372 ORTHO05D009318 1.6e-14 84.3 204 33.8
PGR042G0625 Punica granatum HOM05D007372 ORTHO05D009318 1.6e-14 84.3 263 31.2
Cc10_g06440 Coffea canephora HOM05D007372 ORTHO05D009318 2.0e-14 84.0 139 40.3
Medtr1191s0010 Medicago truncatula HOM05D007372 ORTHO05D009318 2.0e-14 84.0 62 61.3
Sp5g26780 Schrenkiella parvula HOM05D007372 ORTHO05D009318 2.0e-14 84.0 194 33.0
C06p45810 Brassica napus HOM05D007372 ORTHO05D009318 2.7e-14 83.6 176 33.5
Cfa018264 Carpinus fangiana HOM05D007372 ORTHO05D009318 3.5e-14 83.2 133 39.1
Hma1.2p1_0678F.1_g202150 Hydrangea macrophylla HOM05D007372 ORTHO05D009318 3.5e-14 83.2 115 40.9
Gohir.D02G067900 Gossypium hirsutum HOM05D007372 ORTHO05D009318 4.5e-14 82.8 143 35.7
Psat6g060160 Pisum sativum HOM05D007372 ORTHO05D009318 4.5e-14 82.8 156 34.6
CAN.G1183.23 Capsicum annuum HOM05D007372 ORTHO05D009318 5.9e-14 82.4 284 27.8
BolC6t39633H Brassica oleracea HOM05D007372 ORTHO05D009318 1.0e-13 81.6 176 33.5
Gohir.A02G062200 Gossypium hirsutum HOM05D007372 ORTHO05D009318 1.0e-13 81.6 143 35.0
HPP92_004582 Vanilla planifolia HOM05D007372 ORTHO05D009318 1.0e-13 81.6 114 38.6
A07p37910 Brassica napus HOM05D007372 ORTHO05D009318 1.3e-13 81.3 156 35.9
Gorai.005G076700 Gossypium raimondii HOM05D007372 ORTHO05D009318 1.3e-13 81.3 143 35.0
TPR.G19684 Trifolium pratense HOM05D007372 ORTHO05D009318 1.3e-13 81.3 160 33.1
Actinidia17763 Actinidia chinensis HOM05D007372 ORTHO05D009318 1.7e-13 80.9 114 38.6
Cpa.g.sc26.120 Carica papaya HOM05D007372 ORTHO05D009318 1.7e-13 80.9 154 35.1
SGA_v2.0_scaffold82G26208 Striga asiatica HOM05D007372 ORTHO05D009318 2.3e-13 80.5 155 34.2
Rhsim06G0093000 Rhododendron simsii HOM05D007372 ORTHO05D009318 2.9e-13 80.1 272 29.0
TPR.G19681 Trifolium pratense HOM05D007372 ORTHO05D009318 2.9e-13 80.1 59 61.0
Solyc04g072040.1 Solanum lycopersicum HOM05D007372 ORTHO05D009318 3.8e-13 79.7 140 37.9
Os01g0716300 Oryza sativa ssp. japonica HOM05D007372 ORTHO05D009318 6.6e-13 79.0 187 30.5
Aqoxy6G00438 Aquilegia oxysepala HOM05D007372 ORTHO05D009318 1.1e-12 78.2 152 36.2
Thhalv10019840m.g Eutrema salsugineum HOM05D007372 ORTHO05D009318 1.1e-12 78.2 138 39.1
Sopen04g028150 Solanum pennellii HOM05D007372 ORTHO05D009318 1.1e-12 78.2 140 37.1
Duzib093G1977 Durio zibethinus HOM05D007372 ORTHO05D009318 1.9e-12 77.4 114 38.6
ATR1120G103 Amborella trichopoda HOM05D007372 ORTHO05D009318 2.5e-12 77.0 97 43.3
TWI60G0690 Tripterygium wilfordii HOM05D007372 ORTHO05D009318 3.3e-12 76.6 59 59.3
AUR62034913 Chenopodium quinoa HOM05D007372 ORTHO05D009318 4.3e-12 76.3 117 38.5
Glyma.02G077500 Glycine max HOM05D007372 ORTHO05D009318 4.3e-12 76.3 120 35.0
Lalb_Chr19g0129991 Lupinus albus HOM05D007372 ORTHO05D009318 4.3e-12 76.3 191 31.4
Nitab4.5_0004252g0050 Nicotiana tabacum HOM05D007372 ORTHO05D009318 5.6e-12 75.9 109 40.4
MBI01_g42373_MAGBIO Magnolia biondii HOM05D007372 ORTHO05D009318 7.3e-12 75.5 126 37.3
THA.LOC104809747 Tarenaya hassleriana HOM05D007372 ORTHO05D009318 7.3e-12 75.5 197 31.0
FvH4_2g12850 Fragaria vesca HOM05D007372 ORTHO05D009318 9.5e-12 75.1 121 38.8
Ciclev10001857m.g Citrus clementina HOM05D007372 ORTHO05D009318 1.2e-11 74.7 100 40.0
Lj2g0008181 Lotus japonicus HOM05D007372 ORTHO05D009318 1.2e-11 74.7 151 34.4
GSVIVG01013700001 Vitis vinifera HOM05D007372 ORTHO05D009318 1.6e-11 74.3 105 42.9
MELO3C019965.2 Cucumis melo HOM05D007372 ORTHO05D009318 2.1e-11 73.9 141 34.8
CANSAT25G1084 Cannabis sativa HOM05D007372 ORTHO05D009318 2.8e-11 73.6 136 36.0
Sabra02G0050700 Salix brachista HOM05D007372 ORTHO05D009318 2.8e-11 73.6 201 32.8
RcHm_v2.0_Chr6g0273891 Rosa chinensis HOM05D007372 ORTHO05D009318 1.0e-10 71.6 123 38.2
TAR381G1194 Trochodendron aralioides HOM05D007372 ORTHO05D009318 1.0e-10 71.6 151 33.1
CiPaw.15G011400 Carya illinoinensis HOM05D007372 ORTHO05D009318 1.4e-10 71.2 149 30.2
CARHR291030 Cardamine hirsuta HOM05D007372 ORTHO05D009318 3.0e-10 70.1 170 32.9
MBI01_g29001_MAGBIO Magnolia biondii HOM05D007372 ORTHO05D009318 4.0e-10 69.7 126 35.7
Zm00001eb361480 Zea mays HOM05D007372 ORTHO05D009318 4.0e-10 69.7 157 33.1
SalBow7G3614 Salvia bowleyana HOM05D007372 ORTHO05D009318 5.2e-10 69.3 139 36.0
vmacro22649 Vaccinium macrocarpon HOM05D007372 ORTHO05D009318 6.8e-10 68.9 189 29.6
Prupe.8G043800 Prunus persica HOM05D007372 ORTHO05D009318 1.2e-09 68.2 142 33.1
SMO304G0033 Selaginella moellendorffii HOM05D007372 ORTHO05D009318 1.5e-09 67.8 119 34.5
COL.COLO4_24577 Corchorus olitorius HOM05D007372 ORTHO05D009318 2.0e-09 67.4 119 36.1
Medtr0571s0030 Medicago truncatula HOM05D007372 ORTHO05D009318 5.7e-09 65.9 51 58.8
Ca_04659_v3 Cicer arietinum L. HOM05D007372 ORTHO05D009318 9.8e-09 65.1 145 31.0
Haze_17824 Corylus avellana HOM05D007372 ORTHO05D009318 9.8e-09 65.1 160 32.5
Peaxi162Scf00360g00916 Petunia axillaris HOM05D007372 ORTHO05D009318 4.9e-08 62.8 46 63.0
QL02p037053 Quercus lobata HOM05D007372 ORTHO05D009318 1.1e-07 61.6 194 28.9
Hund17499 Selenicereus undatus HOM05D007372 ORTHO05D009318 1.1e-07 61.6 168 31.5
Sc26g0002770 Simmondsia chinensis HOM05D007372 ORTHO05D009318 3.2e-07 60.1 136 33.8
EL10Ac1g01626 Beta vulgaris HOM05D007372 ORTHO05D009318 4.1e-07 59.7 112 32.1
Ah.05g168260 Amaranthus hybridus HOM05D007372 ORTHO05D009318 5.4e-07 59.3 140 31.4
vmacro22532 Vaccinium macrocarpon HOM05D007372 ORTHO05D009318 1.2e-06 58.2 184 27.2
Rhsim04G0161000 Rhododendron simsii HOM05D007372 ORTHO05D009318 1.6e-06 57.8 48 56.2
FAN24G0386 Fragaria x ananassa HOM05D023021 ORTHO05D025344 2.7e-06 57.0 44 61.4
MD05G1035800 Malus domestica HOM05D007372 ORTHO05D009318 4.6e-06 56.2 262 23.7


User provided reference genes

Program Settings