Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0147s0015 Marchantia polymorpha HOM05D000963 ORTHO05D004715 4.2e-59 231.1 113 100.0
C09p39330 Brassica napus HOM05D000963 ORTHO05D004715 2.4e-30 135.6 106 67.0
AL9U11970 Arabidopsis lyrata HOM05D000963 ORTHO05D004715 2.9e-28 128.6 122 59.0
C09p40280 Brassica napus HOM05D000963 ORTHO05D004715 2.9e-28 128.6 122 59.0
BolC9t56918H Brassica oleracea HOM05D000963 ORTHO05D004715 2.9e-28 128.6 122 59.0
BolSC29t60541H Brassica oleracea HOM05D000963 ORTHO05D004715 2.9e-28 128.6 122 59.0
BolSC44t60816H Brassica oleracea HOM05D000963 ORTHO05D004715 2.9e-28 128.6 122 59.0
BolSC44t60829H Brassica oleracea HOM05D000963 ORTHO05D004715 2.9e-28 128.6 122 59.0
BolSC49t61135H Brassica oleracea HOM05D000963 ORTHO05D004715 2.9e-28 128.6 122 59.0
BraSC103t45422Z Brassica rapa HOM05D000963 ORTHO05D004715 2.9e-28 128.6 122 59.0
BraSC103t45433Z Brassica rapa HOM05D000963 ORTHO05D004715 2.9e-28 128.6 122 59.0
BraSC138t45541Z Brassica rapa HOM05D000963 ORTHO05D004715 2.9e-28 128.6 122 59.0
BraSC25t45904Z Brassica rapa HOM05D000963 ORTHO05D004715 2.9e-28 128.6 122 59.0
BraSC25t45917Z Brassica rapa HOM05D000963 ORTHO05D004715 2.9e-28 128.6 122 59.0
BolSC37t60787H Brassica oleracea HOM05D000963 ORTHO05D004715 3.8e-28 128.3 123 58.5
BraSC143t45652Z Brassica rapa HOM05D000963 ORTHO05D004715 8.6e-28 127.1 123 57.7
Migut.D01391 Erythranthe guttata HOM05D000963 ORTHO05D004715 8.6e-28 127.1 122 58.2
BraSC59t46533Z Brassica rapa HOM05D000963 ORTHO05D004715 1.1e-27 126.7 122 57.4
Sopen06g015060 Solanum pennellii HOM05D000963 ORTHO05D004715 1.1e-27 126.7 123 57.7
PGSC0003DMG400034831 Solanum tuberosum HOM05D000963 ORTHO05D004715 1.1e-27 126.7 123 57.7
COL.COLO4_02154 Corchorus olitorius HOM05D000963 ORTHO05D004715 2.5e-27 125.6 122 57.4
Gohir.A01G139826 Gossypium hirsutum HOM05D000963 ORTHO05D004715 3.3e-27 125.2 106 62.3
Sed0012027 Sechium edule HOM05D000963 ORTHO05D004715 3.3e-27 125.2 122 58.2
Atru.chr1.3576 Acer truncatum HOM05D000963 ORTHO05D004715 4.3e-27 124.8 123 58.5
BolSC45t60916H Brassica oleracea HOM05D000963 ORTHO05D004715 5.6e-27 124.4 118 58.5
CAN.G1298.20 Capsicum annuum HOM05D000963 ORTHO05D004715 5.6e-27 124.4 123 56.9
CAN.G929.1 Capsicum annuum HOM05D000963 ORTHO05D004715 5.6e-27 124.4 123 56.9
FvH4_c3g00050 Fragaria vesca HOM05D000963 ORTHO05D004715 5.6e-27 124.4 122 57.4
HPP92_028430 Vanilla planifolia HOM05D000963 ORTHO05D004715 7.3e-27 124.0 122 59.8
Lsat_1_v5_gn_1_88180 Lactuca sativa HOM05D000963 ORTHO05D004715 1.2e-26 123.2 123 57.7
Lsat_1_v5_gn_2_97121 Lactuca sativa HOM05D000963 ORTHO05D004715 1.2e-26 123.2 123 57.7
Lsat_1_v5_gn_9_121741 Lactuca sativa HOM05D000963 ORTHO05D004715 1.2e-26 123.2 123 57.7
Sed0014585 Sechium edule HOM05D000963 ORTHO05D004715 1.2e-26 123.2 123 57.7
Lsat_1_v5_gn_8_139840 Lactuca sativa HOM05D000963 ORTHO05D004715 1.6e-26 122.9 122 57.4
QL10p017079 Quercus lobata HOM05D000963 ORTHO05D004715 1.6e-26 122.9 122 57.4
QL93p0141_0026 Quercus lobata HOM05D000963 ORTHO05D004715 1.6e-26 122.9 122 57.4
Gohir.1Z049781 Gossypium hirsutum HOM05D000963 ORTHO05D004715 2.1e-26 122.5 122 57.4
Gohir.A02G134101 Gossypium hirsutum HOM05D000963 ORTHO05D004715 2.8e-26 122.1 118 57.6
QL93p0141_0000 Quercus lobata HOM05D000963 ORTHO05D004715 6.1e-26 120.9 121 56.2
CAN.G1185.10 Capsicum annuum HOM05D000963 ORTHO05D004715 6.8e-25 117.5 120 54.2
CSS0016818 Camellia sinensis var. sinensis HOM05D000963 ORTHO05D004715 1.5e-24 116.3 103 60.2
Medtr5g080940 Medicago truncatula HOM05D000963 ORTHO05D004715 7.5e-24 114.0 119 53.8
CAN.G965.10 Capsicum annuum HOM05D000963 ORTHO05D004715 1.3e-23 113.2 123 54.5
Lsat_1_v5_gn_5_181901 Lactuca sativa HOM05D000963 ORTHO05D004715 2.9e-23 112.1 120 54.2
Lsat_1_v5_gn_5_4701 Lactuca sativa HOM05D000963 ORTHO05D004715 2.9e-23 112.1 120 54.2
Lsat_1_v5_gn_2_50801 Lactuca sativa HOM05D000963 ORTHO05D004715 6.4e-23 110.9 116 55.2
Gohir.D03G074976 Gossypium hirsutum HOM05D000963 ORTHO05D004715 1.1e-22 110.2 113 53.1
Gohir.A04G057626 Gossypium hirsutum HOM05D000963 ORTHO05D004715 1.6e-21 106.3 106 55.7
Gohir.D04G054150 Gossypium hirsutum HOM05D000963 ORTHO05D004715 2.7e-21 105.5 106 57.5
Potri.011G074033 Populus trichocarpa HOM05D000963 ORTHO05D004715 4.6e-21 104.8 106 54.7
Aqoxy38s008 Aquilegia oxysepala HOM05D000963 ORTHO05D004715 7.8e-21 104.0 106 55.7
FAN13G1706 Fragaria x ananassa HOM05D000963 ORTHO05D004715 1.3e-20 103.2 108 53.7
Nitab4.5_0008665g0030 Nicotiana tabacum HOM05D000963 ORTHO05D004715 1.3e-20 103.2 113 52.2
Gohir.A07G151200 Gossypium hirsutum HOM05D000963 ORTHO05D004715 2.3e-20 102.4 106 55.7
Gohir.D04G096676 Gossypium hirsutum HOM05D000963 ORTHO05D004715 3.0e-20 102.1 106 54.7
Gorai.012G060700 Gossypium raimondii HOM05D000963 ORTHO05D004715 8.6e-20 100.5 108 55.6
Sed0011513 Sechium edule HOM05D000963 ORTHO05D004715 1.1e-19 100.1 115 50.4
Sc01g0005720 Simmondsia chinensis HOM05D000963 ORTHO05D004715 1.9e-19 99.4 107 55.1
CAN.G67.2 Capsicum annuum HOM05D000963 ORTHO05D004715 4.3e-19 98.2 122 49.2
Sed0006422 Sechium edule HOM05D000963 ORTHO05D004715 4.3e-19 98.2 117 51.3
Gohir.A05G286366 Gossypium hirsutum HOM05D000963 ORTHO05D004715 2.1e-18 95.9 98 55.1
unitig_91.g26522 Utricularia gibba HOM05D000963 ORTHO05D004715 2.8e-18 95.5 55 80.0
unitig_91.g26525 Utricularia gibba HOM05D000963 ORTHO05D004715 2.8e-18 95.5 55 80.0
arahy.Tifrunner.gnm1.ann1.D5AR02 Arachis hypogaea HOM05D000963 ORTHO05D004715 4.7e-18 94.7 100 53.0
DCAR_014935 Daucus carota HOM05D000963 ORTHO05D004715 6.2e-18 94.4 59 72.9
Sed0003522 Sechium edule HOM05D000963 ORTHO05D004715 6.2e-18 94.4 111 51.4
ECA074G0007 Erigeron canadensis HOM05D000963 ORTHO05D004715 8.0e-18 94.0 104 53.8
ECA074G0008 Erigeron canadensis HOM05D000963 ORTHO05D004715 8.0e-18 94.0 104 53.8
arahy.Tifrunner.gnm1.ann1.0S9V2W Arachis hypogaea HOM05D000963 ORTHO05D004715 1.1e-17 93.6 55 78.2
arahy.Tifrunner.gnm1.ann1.56M0GV Arachis hypogaea HOM05D000963 ORTHO05D004715 1.1e-17 93.6 55 78.2
arahy.Tifrunner.gnm1.ann1.E29LBX Arachis hypogaea HOM05D000963 ORTHO05D004715 1.1e-17 93.6 55 78.2
arahy.Tifrunner.gnm1.ann1.NRNC1F Arachis hypogaea HOM05D000963 ORTHO05D004715 1.1e-17 93.6 55 78.2
arahy.Tifrunner.gnm1.ann1.PH4GL6 Arachis hypogaea HOM05D000963 ORTHO05D004715 1.1e-17 93.6 55 78.2
arahy.Tifrunner.gnm1.ann1.RS9AFF Arachis hypogaea HOM05D000963 ORTHO05D004715 1.1e-17 93.6 55 78.2
arahy.Tifrunner.gnm1.ann1.TDDH8C Arachis hypogaea HOM05D000963 ORTHO05D004715 1.1e-17 93.6 55 78.2
arahy.Tifrunner.gnm1.ann1.UGP0DD Arachis hypogaea HOM05D000963 ORTHO05D004715 1.1e-17 93.6 55 78.2
arahy.Tifrunner.gnm1.ann1.WD30LQ Arachis hypogaea HOM05D000963 ORTHO05D004715 1.1e-17 93.6 55 78.2
arahy.Tifrunner.gnm1.ann1.WSE485 Arachis hypogaea HOM05D000963 ORTHO05D004715 1.1e-17 93.6 55 78.2
arahy.Tifrunner.gnm1.ann1.ZA1EMG Arachis hypogaea HOM05D000963 ORTHO05D004715 1.1e-17 93.6 55 78.2
arahy.Tifrunner.gnm1.ann1.54C0KZ Arachis hypogaea HOM05D000963 ORTHO05D004715 1.4e-17 93.2 55 78.2
BraSC58t46456Z Brassica rapa HOM05D000963 ORTHO05D004715 1.4e-17 93.2 52 80.8
Oeu012821.1 Olea europaea HOM05D000963 ORTHO05D004715 3.1e-17 92.0 122 48.4
Sabra11G0069300 Salix brachista HOM05D000963 ORTHO05D004715 8.9e-17 90.5 115 48.7
HPP92_028383 Vanilla planifolia HOM05D000963 ORTHO05D004715 1.3e-15 86.7 100 52.0
HPP92_028406 Vanilla planifolia HOM05D000963 ORTHO05D004715 1.3e-15 86.7 100 52.0
HPP92_028415 Vanilla planifolia HOM05D000963 ORTHO05D004715 1.3e-15 86.7 100 52.0
HPP92_028419 Vanilla planifolia HOM05D000963 ORTHO05D004715 1.7e-15 86.3 99 50.5
HPP92_028432 Vanilla planifolia HOM05D000963 ORTHO05D004715 1.7e-15 86.3 99 50.5
Gohir.A01G139250 Gossypium hirsutum HOM05D000963 ORTHO05D004715 2.2e-15 85.9 46 84.8
Lsat_1_v5_gn_1_109481 Lactuca sativa HOM05D000963 ORTHO05D004715 8.3e-15 84.0 61 65.6
Psat3g162200 Pisum sativum HOM05D000963 ORTHO05D004715 1.4e-14 83.2 43 83.7
Gohir.D01G169154 Gossypium hirsutum HOM05D000963 ORTHO05D004715 2.4e-14 82.4 105 49.5
TPR.G27622 Trifolium pratense HOM05D000963 ORTHO05D004715 3.2e-14 82.0 46 78.3
Dinv05169 Davidia involucrata HOM05D000963 ORTHO05D004715 7.0e-14 80.9 45 77.8
Rhsim12G0135200 Rhododendron simsii HOM05D000963 ORTHO05D004715 7.0e-14 80.9 46 78.3
Hma1.2p1_0051F.1_g029250 Hydrangea macrophylla HOM05D000963 ORTHO05D004715 1.6e-13 79.7 40 85.0
arahy.Tifrunner.gnm1.ann1.0QCF99 Arachis hypogaea HOM05D000963 ORTHO05D004715 2.7e-13 79.0 46 76.1
arahy.Tifrunner.gnm1.ann1.6K111H Arachis hypogaea HOM05D000963 ORTHO05D004715 2.7e-13 79.0 46 76.1
arahy.Tifrunner.gnm1.ann1.B9EW81 Arachis hypogaea HOM05D000963 ORTHO05D004715 2.7e-13 79.0 46 76.1
arahy.Tifrunner.gnm1.ann1.NMB5YK Arachis hypogaea HOM05D000963 ORTHO05D004715 2.7e-13 79.0 46 76.1
arahy.Tifrunner.gnm1.ann1.QIDR5S Arachis hypogaea HOM05D000963 ORTHO05D004715 2.7e-13 79.0 46 76.1
Dinv39831 Davidia involucrata HOM05D000963 ORTHO05D004715 3.5e-13 78.6 45 77.8
Sc25g0002020 Simmondsia chinensis HOM05D000963 ORTHO05D004715 4.6e-13 78.2 40 82.5
VMungo0331G0858 Vigna mungo HOM05D000963 ORTHO05D004715 4.6e-13 78.2 60 61.7
Medtr1g105230 Medicago truncatula HOM05D000963 ORTHO05D004715 6.0e-13 77.8 41 80.5
FvH4_7g01961 Fragaria vesca HOM05D000963 ORTHO05D004715 1.3e-12 76.6 112 46.4
Phvul.003G259600 Phaseolus vulgaris HOM05D000963 ORTHO05D004715 1.7e-12 76.3 59 62.7
Actinidia23508 Actinidia chinensis HOM05D000963 ORTHO05D004715 3.0e-12 75.5 53 66.0
arahy.Tifrunner.gnm1.ann1.LM30Y3 Arachis hypogaea HOM05D000963 ORTHO05D004715 3.0e-12 75.5 46 71.7
Nitab4.5_0012234g0080 Nicotiana tabacum HOM05D000963 ORTHO05D004715 5.0e-12 74.7 81 55.6
Gorai.002G200300 Gossypium raimondii HOM05D000963 ORTHO05D004715 1.5e-11 73.2 46 73.9
Oeu050315.1 Olea europaea HOM05D000963 ORTHO05D004715 1.9e-11 72.8 100 48.0
BcaNung01516 Brassica carinata HOM05D000963 ORTHO05D004715 3.3e-11 72.0 42 76.2
CsaV3_2G008200 Cucumis sativus L. HOM05D000963 ORTHO05D004715 4.3e-11 71.6 49 71.4
arahy.Tifrunner.gnm1.ann1.R4PVYI Arachis hypogaea HOM05D000963 ORTHO05D004715 9.5e-11 70.5 45 68.9
FAN18G1953 Fragaria x ananassa HOM05D000315 ORTHO05D004100 1.6e-10 69.7 55 61.8
CAN.G1594.2 Capsicum annuum HOM05D016096 ORTHO05D016167 2.8e-10 68.9 40 80.0
Oeu015131.2 Olea europaea HOM05D000963 ORTHO05D004715 8.1e-10 67.4 44 65.9
Glyma.06G274000 Glycine max HOM05D000963 ORTHO05D004715 1.4e-09 66.6 115 40.9
Psat5g119040 Pisum sativum HOM05D000963 ORTHO05D004715 1.4e-09 66.6 36 80.6
Gorai.002G027900 Gossypium raimondii HOM05D000963 ORTHO05D004715 1.8e-09 66.2 41 70.7
Gohir.D01G023469 Gossypium hirsutum HOM05D000963 ORTHO05D004715 8.9e-09 63.9 48 62.5
SalBow1G2814 Salvia bowleyana HOM05D000963 ORTHO05D004715 2.6e-08 62.4 98 43.9
SalBow1G5969 Salvia bowleyana HOM05D000963 ORTHO05D004715 2.6e-08 62.4 98 43.9
BraSC59t46506Z Brassica rapa HOM05D000963 ORTHO05D004715 3.4e-08 62.0 92 45.7
Nitab4.5_0004137g0020 Nicotiana tabacum HOM05D000963 ORTHO05D004715 7.1e-06 54.3 35 74.3


User provided reference genes

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