Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0147s0009 Marchantia polymorpha HOM05D007292 ORTHO05D009084 3.4e-163 578.6 358 100.0
Pp3c10_22900 Physcomitrium patens HOM05D033432 ORTHO05D009084 1.6e-27 127.9 300 34.0
AagrBONN_evm.TU.Sc2ySwM_344.666 Anthoceros agrestis HOM05D007292 ORTHO05D009084 1.1e-23 115.2 87 64.4
SEGI_20884 Sequoiadendron giganteum HOM05D007292 ORTHO05D009084 3.6e-19 100.1 87 56.3
CBR_g34696 Chara braunii HOM05D033432 ORTHO05D009084 1.4e-10 71.6 68 57.4
THA.LOC104824327 Tarenaya hassleriana HOM05D007292 ORTHO05D009084 1.3e-08 65.1 86 43.0
Prupe.2G252500 Prunus persica HOM05D007292 ORTHO05D009084 3.7e-08 63.5 85 41.2
Phvul.001G244400 Phaseolus vulgaris HOM05D007292 ORTHO05D009084 4.8e-08 63.2 91 39.6
MD07G1224000 Malus domestica HOM05D007292 ORTHO05D009084 6.3e-08 62.8 90 38.9
QL08p063404 Quercus lobata HOM05D007292 ORTHO05D009084 6.3e-08 62.8 85 40.0
Hund13879 Selenicereus undatus HOM05D007292 ORTHO05D009084 8.2e-08 62.4 86 40.7
THA.LOC104811239 Tarenaya hassleriana HOM05D007292 ORTHO05D009084 8.2e-08 62.4 86 41.9
Actinidia00958 Actinidia chinensis HOM05D007292 ORTHO05D009084 1.4e-07 61.6 86 39.5
Cfa001300 Carpinus fangiana HOM05D007292 ORTHO05D009084 1.4e-07 61.6 86 39.5
Duzib114G0074 Durio zibethinus HOM05D007292 ORTHO05D009084 1.4e-07 61.6 86 37.2
MD01G1154900 Malus domestica HOM05D007292 ORTHO05D009084 1.4e-07 61.6 85 41.2
Psat5g129440 Pisum sativum HOM05D007292 ORTHO05D009084 1.4e-07 61.6 84 38.1
TPR.G11203 Trifolium pratense HOM05D007292 ORTHO05D009084 1.4e-07 61.6 84 36.9
Gohir.D04G069400 Gossypium hirsutum HOM05D007292 ORTHO05D009084 1.8e-07 61.2 86 38.4
Lj6g0005846 Lotus japonicus HOM05D007292 ORTHO05D009084 1.8e-07 61.2 86 40.7
Thecc.10G013900 Theobroma cacao HOM05D007292 ORTHO05D009084 1.8e-07 61.2 86 37.2
Haze_17244 Corylus avellana HOM05D004762 ORTHO05D005972 2.4e-07 60.8 86 39.5
PGR044G1044 Punica granatum HOM05D007292 ORTHO05D009084 2.4e-07 60.8 88 42.0
VMungo1383G3483 Vigna mungo HOM05D001399 ORTHO05D001670 2.4e-07 60.8 84 42.9
Eucgr.J00191 Eucalyptus grandis HOM05D007292 ORTHO05D009084 3.1e-07 60.5 86 40.7
Gohir.A05G330800 Gossypium hirsutum HOM05D007292 ORTHO05D009084 3.1e-07 60.5 86 38.4
Gorai.012G078000 Gossypium raimondii HOM05D007292 ORTHO05D009084 3.1e-07 60.5 86 38.4
Lalb_Chr08g0231651 Lupinus albus HOM05D007292 ORTHO05D009084 3.1e-07 60.5 86 38.4
Manes.07G131600 Manihot esculenta HOM05D007292 ORTHO05D009084 3.1e-07 60.5 87 40.2
CiPaw.01G300300 Carya illinoinensis HOM05D007292 ORTHO05D009084 4.1e-07 60.1 86 38.4
Cc08_g07220 Coffea canephora HOM05D007292 ORTHO05D009084 4.1e-07 60.1 86 40.7
Glyma.11G231200 Glycine max HOM05D007292 ORTHO05D009084 4.1e-07 60.1 84 38.1
Glyma.18G025900 Glycine max HOM05D007292 ORTHO05D009084 4.1e-07 60.1 84 38.1
Actinidia13950 Actinidia chinensis HOM05D007292 ORTHO05D009084 5.3e-07 59.7 86 38.4
Cpa.g.sc19.157 Carica papaya HOM05D007292 ORTHO05D009084 7.0e-07 59.3 86 39.5
TWI09G0172 Tripterygium wilfordii HOM05D007292 ORTHO05D009084 7.0e-07 59.3 86 37.2
GSVIVG01032790001 Vitis vinifera HOM05D007292 ORTHO05D009084 9.1e-07 58.9 86 39.5
ATR0681G254 Amborella trichopoda HOM05D007292 ORTHO05D009084 1.5e-06 58.2 86 38.4
AUR62022909 Chenopodium quinoa HOM05D007292 ORTHO05D009084 1.5e-06 58.2 86 38.4
Medtr3g070960 Medicago truncatula HOM05D007292 ORTHO05D009084 1.5e-06 58.2 85 36.5
Os03g0293100 Oryza sativa ssp. japonica HOM05D007292 ORTHO05D009084 1.5e-06 58.2 87 37.9
Hma1.2p1_0145F.1_g065370 Hydrangea macrophylla HOM05D007292 ORTHO05D009084 2.0e-06 57.8 85 35.3
Hma1.2p1_2705F.1_g327175 Hydrangea macrophylla HOM05D007292 ORTHO05D009084 2.0e-06 57.8 85 35.3
PGSC0003DMG400027726 Solanum tuberosum HOM05D007292 ORTHO05D009084 2.0e-06 57.8 86 38.4
TWI53G0916 Tripterygium wilfordii HOM05D007292 ORTHO05D009084 2.0e-06 57.8 86 36.0
Aqoxy6G01833 Aquilegia oxysepala HOM05D007292 ORTHO05D009084 2.6e-06 57.4 84 38.1
Nitab4.5_0002701g0020 Nicotiana tabacum HOM05D007292 ORTHO05D009084 2.6e-06 57.4 86 36.0
TAR633G2478 Trochodendron aralioides HOM05D007292 ORTHO05D009084 2.6e-06 57.4 84 36.9
Atru.chr12.94 Acer truncatum HOM05D007292 ORTHO05D009084 3.5e-06 57.0 73 39.7
EL10Ac2g04856 Beta vulgaris HOM05D007292 ORTHO05D009084 3.5e-06 57.0 84 38.1
Ciclev10032544m.g Citrus clementina HOM05D007292 ORTHO05D009084 3.5e-06 57.0 84 36.9
Peaxi162Scf00484g00003 Petunia axillaris HOM05D007292 ORTHO05D009084 3.5e-06 57.0 86 37.2
AL5G37290 Arabidopsis lyrata HOM05D007292 ORTHO05D009084 4.5e-06 56.6 84 38.1
AT3G56010 Arabidopsis thaliana HOM05D007292 ORTHO05D009084 4.5e-06 56.6 84 38.1
Nitab4.5_0000487g0050 Nicotiana tabacum HOM05D007292 ORTHO05D009084 4.5e-06 56.6 86 36.0
Potri.008G070700 Populus trichocarpa HOM05D007292 ORTHO05D009084 4.5e-06 56.6 87 37.9
Sabra08G0052000 Salix brachista HOM05D007292 ORTHO05D009084 4.5e-06 56.6 87 37.9
Sc10g0002470 Simmondsia chinensis HOM05D007292 ORTHO05D009084 4.5e-06 56.6 86 39.5
MELO3C018364.2 Cucumis melo HOM05D007292 ORTHO05D009084 5.9e-06 56.2 86 34.9
Carub.0005s2275 Capsella rubella HOM05D007292 ORTHO05D009084 7.7e-06 55.8 84 38.1


User provided reference genes

Program Settings