Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0147s0008 Marchantia polymorpha HOM05D006412 ORTHO05D008025 2.3e-87 325.5 160 100.0
Pp3c16_620 Physcomitrium patens HOM05D006412 ORTHO05D008025 3.1e-39 165.6 144 59.0
SMO147G0011 Selaginella moellendorffii HOM05D006412 ORTHO05D008025 4.9e-37 158.3 145 53.8
Os01g0687500 Oryza sativa ssp. japonica HOM05D006412 ORTHO05D008025 8.4e-37 157.5 145 54.5
AagrBONN_evm.TU.Sc2ySwM_344.1769 Anthoceros agrestis HOM05D006412 ORTHO05D008025 1.9e-36 156.4 145 54.5
Prupe.3G152400 Prunus persica HOM05D006412 ORTHO05D008025 1.6e-35 153.3 144 55.6
PGR042G1412 Punica granatum HOM05D006412 ORTHO05D008025 1.6e-35 153.3 146 54.8
Migut.L00473 Erythranthe guttata HOM05D006412 ORTHO05D008025 2.7e-35 152.5 149 57.0
FAN24G3364 Fragaria x ananassa HOM05D006412 ORTHO05D008025 2.7e-35 152.5 149 52.3
Lalb_Chr03g0035001 Lupinus albus HOM05D006412 ORTHO05D008025 2.7e-35 152.5 145 54.5
Glyma.05G001000 Glycine max HOM05D006412 ORTHO05D008025 3.5e-35 152.1 145 53.1
FvH4_2g04020 Fragaria vesca HOM05D006412 ORTHO05D008025 4.6e-35 151.8 149 52.3
MBI16_g24204_MAGBIO Magnolia biondii HOM05D006412 ORTHO05D008025 6.0e-35 151.4 145 52.4
Medtr6g003980 Medicago truncatula HOM05D006412 ORTHO05D008025 6.0e-35 151.4 145 53.1
Sabra17G0101600 Salix brachista HOM05D006412 ORTHO05D008025 1.0e-34 150.6 146 55.5
Sabra17G0104300 Salix brachista HOM05D006412 ORTHO05D008025 1.3e-34 150.2 146 55.5
TPR.G25248 Trifolium pratense HOM05D006412 ORTHO05D008025 1.3e-34 150.2 145 53.8
RcHm_v2.0_Chr3g0493551 Rosa chinensis HOM05D006412 ORTHO05D008025 1.7e-34 149.8 149 53.0
RcHm_v2.0_Chr3g0491591 Rosa chinensis HOM05D006412 ORTHO05D008025 2.3e-34 149.4 149 53.0
Eucgr.F02693 Eucalyptus grandis HOM05D006412 ORTHO05D008025 3.9e-34 148.7 149 55.7
EL10Ac2g04491 Beta vulgaris HOM05D006412 ORTHO05D008025 5.1e-34 148.3 144 54.9
BcaB03g15262 Brassica carinata HOM05D006412 ORTHO05D008025 5.1e-34 148.3 146 54.1
Lj2g0003354 Lotus japonicus HOM05D006412 ORTHO05D008025 5.1e-34 148.3 143 52.4
CANSAT78G1038 Cannabis sativa HOM05D006412 ORTHO05D008025 6.6e-34 147.9 144 53.5
Cpa.g.sc116.15 Carica papaya HOM05D006412 ORTHO05D008025 8.7e-34 147.5 146 55.5
VMungo0464G0110 Vigna mungo HOM05D006412 ORTHO05D008025 8.7e-34 147.5 145 51.0
Ca_24327_v3 Cicer arietinum L. HOM05D006412 ORTHO05D008025 1.1e-33 147.1 145 51.7
FAN15G2201 Fragaria x ananassa HOM05D006412 ORTHO05D008025 1.5e-33 146.7 149 51.7
MD09G1260600 Malus domestica HOM05D006412 ORTHO05D008025 1.5e-33 146.7 144 53.5
Sc11g0008580 Simmondsia chinensis HOM05D006412 ORTHO05D008025 1.5e-33 146.7 146 55.5
Ciclev10013714m.g Citrus clementina HOM05D006412 ORTHO05D008025 1.9e-33 146.4 144 56.2
BcaC08g46048 Brassica carinata HOM05D006412 ORTHO05D008025 2.5e-33 146.0 146 53.4
C06p39860 Brassica napus HOM05D006412 ORTHO05D008025 2.5e-33 146.0 146 53.4
Cfa007858 Carpinus fangiana HOM05D006412 ORTHO05D008025 2.5e-33 146.0 148 54.7
GSVIVG01030886001 Vitis vinifera HOM05D006412 ORTHO05D008025 2.5e-33 146.0 144 53.5
BolC6t39074H Brassica oleracea HOM05D006412 ORTHO05D008025 4.3e-33 145.2 146 52.7
AUR62026045 Chenopodium quinoa HOM05D006412 ORTHO05D008025 4.3e-33 145.2 144 53.5
Phvul.004G001300 Phaseolus vulgaris HOM05D006412 ORTHO05D008025 4.3e-33 145.2 145 50.3
ECA232G0076 Erigeron canadensis HOM05D006412 ORTHO05D008025 5.6e-33 144.8 146 53.4
BraA07t30973Z Brassica rapa HOM05D006412 ORTHO05D008025 7.3e-33 144.4 146 52.7
A07p33470 Brassica napus HOM05D006412 ORTHO05D008025 9.6e-33 144.1 146 53.4
Manes.01G114900 Manihot esculenta HOM05D006412 ORTHO05D008025 1.6e-32 143.3 148 53.4
Sed0012276 Sechium edule HOM05D006412 ORTHO05D008025 1.6e-32 143.3 146 52.1
Aqoxy3G04032 Aquilegia oxysepala HOM05D006412 ORTHO05D008025 2.1e-32 142.9 146 52.1
SGA_v2.0_scaffold174G39268 Striga asiatica HOM05D006412 ORTHO05D008025 2.8e-32 142.5 146 52.1
AL2G22970 Arabidopsis lyrata HOM05D006412 ORTHO05D008025 3.6e-32 142.1 149 53.7
AUR62032836 Chenopodium quinoa HOM05D006412 ORTHO05D008025 3.6e-32 142.1 149 51.7
Cc07_g08250 Coffea canephora HOM05D006412 ORTHO05D008025 3.6e-32 142.1 144 52.1
Sp5g21570 Schrenkiella parvula HOM05D006412 ORTHO05D008025 3.6e-32 142.1 146 51.4
TWI74G1556 Tripterygium wilfordii HOM05D006412 ORTHO05D008025 3.6e-32 142.1 146 54.1
PGSC0003DMG400030600 Solanum tuberosum HOM05D006412 ORTHO05D008025 4.8e-32 141.7 146 50.7
Nitab4.5_0003598g0080 Nicotiana tabacum HOM05D006412 ORTHO05D008025 6.2e-32 141.4 146 50.0
Atru.chr1.1777 Acer truncatum HOM05D006412 ORTHO05D008025 8.1e-32 141.0 144 51.4
MELO3C020307.2 Cucumis melo HOM05D006412 ORTHO05D008025 8.1e-32 141.0 146 50.7
Dinv14869 Davidia involucrata HOM05D006412 ORTHO05D008025 8.1e-32 141.0 146 51.4
SalBow3G1843 Salvia bowleyana HOM05D006412 ORTHO05D008025 8.1e-32 141.0 146 53.4
Solyc02g091290.3 Solanum lycopersicum HOM05D006412 ORTHO05D008025 8.1e-32 141.0 146 50.7
Aa31LG2G3160 Aethionema arabicum HOM05D006412 ORTHO05D008025 1.1e-31 140.6 149 53.7
Gohir.D07G080800 Gossypium hirsutum HOM05D006412 ORTHO05D008025 1.4e-31 140.2 147 53.1
PSO339G1787 Papaver somniferum HOM05D006412 ORTHO05D008025 1.4e-31 140.2 144 53.5
HanXRQChr09g0262341 Helianthus annuus HOM05D006412 ORTHO05D008025 1.8e-31 139.8 146 51.4
Lsat_1_v5_gn_4_154881 Lactuca sativa HOM05D006412 ORTHO05D008025 1.8e-31 139.8 146 49.3
Nn3g18189 Nelumbo nucifera HOM05D006412 ORTHO05D008025 1.8e-31 139.8 146 53.4
THA.LOC104822436 Tarenaya hassleriana HOM05D006412 ORTHO05D008025 1.8e-31 139.8 149 53.0
Gorai.001G085900 Gossypium raimondii HOM05D006412 ORTHO05D008025 2.4e-31 139.4 147 53.1
Carub.0002s1254 Capsella rubella HOM05D006412 ORTHO05D008025 3.1e-31 139.0 146 51.4
Oeu030807.1 Olea europaea HOM05D006412 ORTHO05D008025 3.1e-31 139.0 146 53.4
PSO384G0683 Papaver somniferum HOM05D006412 ORTHO05D008025 3.1e-31 139.0 144 52.8
Sopen02g035910 Solanum pennellii HOM05D006412 ORTHO05D008025 3.1e-31 139.0 146 50.7
Nitab4.5_0002456g0120 Nicotiana tabacum HOM05D006412 ORTHO05D008025 5.3e-31 138.3 146 48.6
unitig_32.g11755 Utricularia gibba HOM05D006412 ORTHO05D008025 6.9e-31 137.9 144 51.4
AT1G66520 Arabidopsis thaliana HOM05D006412 ORTHO05D008025 1.2e-30 137.1 146 51.4
MSTRG.2784 Avicennia marina HOM05D006412 ORTHO05D008025 1.2e-30 137.1 148 49.3
ClCG05G010820 Citrullus lanatus HOM05D006412 ORTHO05D008025 1.2e-30 137.1 151 50.3
Hund16200 Selenicereus undatus HOM05D006412 ORTHO05D008025 1.5e-30 136.7 144 52.1
CSS0049075 Camellia sinensis var. sinensis HOM05D006412 ORTHO05D008025 3.4e-30 135.6 146 51.4
SHI30139 Sapria himalayana HOM05D006412 ORTHO05D008025 3.4e-30 135.6 143 48.3
CAN.G625.77 Capsicum annuum HOM05D006412 ORTHO05D008025 4.5e-30 135.2 146 50.7
Peaxi162Scf00803g00420 Petunia axillaris HOM05D006412 ORTHO05D008025 5.8e-30 134.8 146 50.0
HPP92_024416 Vanilla planifolia HOM05D006412 ORTHO05D008025 1.7e-29 133.3 145 47.6
TAR629G1190 Trochodendron aralioides HOM05D006412 ORTHO05D008025 1.9e-28 129.8 141 53.2
AL2G24490 Arabidopsis lyrata HOM05D004538 ORTHO05D006068 3.2e-28 129.0 139 51.8
SEGI_25003 Sequoiadendron giganteum HOM05D006412 ORTHO05D008025 2.7e-27 125.9 122 55.7
arahy.Tifrunner.gnm1.ann1.QMY2CQ Arachis hypogaea HOM05D002475 ORTHO05D002710 1.9e-25 119.8 119 52.1
ATR0686G130 Amborella trichopoda HOM05D006412 ORTHO05D008025 4.3e-25 118.6 124 49.2
arahy.Tifrunner.gnm1.ann1.1V0F05 Arachis hypogaea HOM05D002475 ORTHO05D008025 4.3e-25 118.6 119 52.1
COL.COLO4_27119 Corchorus olitorius HOM05D006412 ORTHO05D008025 7.4e-25 117.9 115 56.5
MBI16_g44113_MAGBIO Magnolia biondii HOM05D006412 ORTHO05D008025 9.0e-23 110.9 145 42.8
Cre12.g560550 Chlamydomonas reinhardtii HOM05D006412 ORTHO05D008025 2.0e-22 109.8 151 41.7
DCAR_025879 Daucus carota HOM05D006412 ORTHO05D008025 2.0e-22 109.8 119 48.7
MBI08_g39920_MAGBIO Magnolia biondii HOM05D006412 ORTHO05D008025 2.6e-22 109.4 145 42.1
AUR62023199 Chenopodium quinoa HOM05D006412 ORTHO05D008025 4.5e-22 108.6 119 48.7
CBR_g48389 Chara braunii HOM05D006412 ORTHO05D008025 1.3e-21 107.1 166 42.2
AL2G24420 Arabidopsis lyrata HOM05D006412 ORTHO05D008025 1.1e-20 104.0 121 47.9
SEGI_18017 Sequoiadendron giganteum HOM05D006412 ORTHO05D008025 1.4e-20 103.6 83 60.2
vmacro18058 Vaccinium macrocarpon HOM05D006412 ORTHO05D008025 1.4e-20 103.6 196 36.2
Duzib133G0980 Durio zibethinus HOM05D006412 ORTHO05D008025 2.5e-20 102.8 111 52.3
Lj2A436G33 Lonicera japonica HOM05D006412 ORTHO05D008025 2.5e-20 102.8 151 44.4
MCO14G351 Micromonas commoda HOM05D006412 ORTHO05D008025 3.2e-20 102.4 150 41.3
Rhsim08G0085000 Rhododendron simsii HOM05D006412 ORTHO05D008025 4.6e-19 98.6 107 49.5
MBI13_g41159_MAGBIO Magnolia biondii HOM05D006412 ORTHO05D008025 2.1e-16 89.7 132 38.6
QL12p004163 Quercus lobata HOM05D006412 ORTHO05D008025 3.4e-14 82.4 145 38.6
HanXRQChr16g0531301 Helianthus annuus HOM05D006412 ORTHO05D008025 7.6e-14 81.3 59 66.1
PRCOL_00006745 Prasinoderma coloniale HOM05D006412 ORTHO05D008025 3.2e-12 75.9 133 37.6
Potri.017G123300 Populus trichocarpa HOM05D006412 ORTHO05D008025 3.0e-10 69.3 46 69.6
CiPaw.03G067700 Carya illinoinensis HOM05D006412 ORTHO05D008025 1.9e-09 66.6 47 68.1
CARHR058440 Cardamine hirsuta HOM05D006412 ORTHO05D008025 3.3e-09 65.9 46 65.2
HanXRQChr03g0068601 Helianthus annuus HOM05D006412 ORTHO05D008025 4.3e-09 65.5 48 62.5
Zm00001eb156380 Zea mays HOM05D006412 ORTHO05D008025 4.3e-09 65.5 46 65.2
Thhalv10019000m.g Eutrema salsugineum HOM05D006412 ORTHO05D008025 1.3e-08 63.9 46 65.2
CsaV3_3G017690 Cucumis sativus L. HOM05D006412 ORTHO05D008025 2.8e-08 62.8 46 63.0
HanXRQChr01g0030591 Helianthus annuus HOM05D006412 ORTHO05D008025 4.8e-08 62.0 46 60.9
Psat1g052240 Pisum sativum HOM05D006412 ORTHO05D008025 4.8e-08 62.0 46 63.0
Cre09.g392729 Chlamydomonas reinhardtii HOM05D006412 ORTHO05D008025 8.2e-08 61.2 74 47.3
Gohir.A07G076300 Gossypium hirsutum HOM05D006412 ORTHO05D008025 1.8e-07 60.1 47 57.4
Thecc.04G123200 Theobroma cacao HOM05D006412 ORTHO05D008025 4.1e-07 58.9 46 60.9


User provided reference genes

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