Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0147s0001 Marchantia polymorpha HOM05D020945 ORTHO05D253211 4.4e-242 840.9 423 100.0
Mapoly0346s0002 Marchantia polymorpha HOM05D020945 ORTHO05D254421 4.4e-178 628.2 423 77.5
Mapoly0147s0002 Marchantia polymorpha HOM05D020945 ORTHO05D251377 3.6e-164 582.0 433 70.7
Mapoly0397s0001 Marchantia polymorpha HOM05D020945 ORTHO05D253181 2.5e-141 506.1 396 65.9
Mapoly0147s0004 Marchantia polymorpha HOM05D000242 ORTHO05D000700 3.7e-132 475.7 362 66.0
Mapoly0147s0041 Marchantia polymorpha HOM05D000242 ORTHO05D000700 1.5e-117 427.2 382 57.3
Mapoly0147s0044 Marchantia polymorpha HOM05D000242 ORTHO05D000700 8.2e-116 421.4 403 54.3
Mapoly0020s0126 Marchantia polymorpha HOM05D000242 ORTHO05D000700 2.8e-108 396.4 328 61.6
Mapoly2448s0001 Marchantia polymorpha HOM05D020945 ORTHO05D251686 2.3e-102 376.7 270 68.1
Mapoly0108s0045 Marchantia polymorpha HOM05D020945 ORTHO05D000713 1.7e-97 360.5 317 57.4
Mapoly0041s0095 Marchantia polymorpha HOM05D011080 ORTHO05D000239 2.0e-21 107.8 306 30.1
Mapoly0064s0093 Marchantia polymorpha HOM05D004348 ORTHO05D000239 1.4e-19 101.7 280 31.8
Mapoly0062s0120 Marchantia polymorpha HOM05D004348 ORTHO05D000239 1.1e-16 92.0 291 27.8
Mapoly0067s0038 Marchantia polymorpha HOM05D000005 ORTHO05D000239 2.0e-16 91.3 297 29.3
Mapoly0893s0001 Marchantia polymorpha HOM05D004348 ORTHO05D000239 2.0e-16 91.3 303 28.1
Mapoly0053s0005 Marchantia polymorpha HOM05D011080 ORTHO05D000239 2.5e-16 90.9 332 27.4
Mapoly0107s0021 Marchantia polymorpha HOM05D004348 ORTHO05D000239 2.5e-16 90.9 296 27.7
Mapoly1060s0002 Marchantia polymorpha HOM05D004348 ORTHO05D000239 7.4e-16 89.4 301 28.2
Mapoly0049s0015 Marchantia polymorpha HOM05D004348 ORTHO05D000239 9.7e-16 89.0 309 28.5
Mapoly0010s0128 Marchantia polymorpha HOM05D000005 ORTHO05D000239 1.3e-15 88.6 295 27.8
Mapoly0031s0035 Marchantia polymorpha HOM05D004348 ORTHO05D000239 1.7e-15 88.2 277 27.4
Mapoly0007s0015 Marchantia polymorpha HOM05D000005 ORTHO05D000239 1.1e-14 85.5 294 28.6
Mapoly0110s0039 Marchantia polymorpha HOM05D011080 ORTHO05D000239 9.1e-14 82.4 324 26.2
Mapoly0637s0001 Marchantia polymorpha HOM05D004348 ORTHO05D000239 1.2e-13 82.0 316 25.3
Mapoly0052s0114 Marchantia polymorpha HOM05D029023 ORTHO05D030122 7.7e-13 79.3 251 28.7
Mapoly0016s0164 Marchantia polymorpha HOM05D004348 ORTHO05D000239 1.3e-12 78.6 164 33.5
Mapoly0200s0002 Marchantia polymorpha HOM05D004348 ORTHO05D000239 6.5e-12 76.3 315 25.1
Mapoly2546s0001 Marchantia polymorpha HOM05D004348 ORTHO05D000239 1.4e-11 75.1 323 26.0
GSVIVG01009553001 Vitis vinifera HOM05D004348 ORTHO05D006191 2.6e-08 64.3 161 31.7
Dinv35980 Davidia involucrata HOM05D004348 ORTHO05D006191 3.3e-08 63.9 220 27.7
SEGI_07910 Sequoiadendron giganteum HOM05D004348 ORTHO05D006191 4.4e-08 63.5 110 34.5
Nn5g30212 Nelumbo nucifera HOM05D004348 ORTHO05D006191 5.7e-08 63.2 240 27.5
Mapoly0200s0001 Marchantia polymorpha HOM05D004348 ORTHO05D000239 7.4e-08 62.8 316 24.4
Aqoxy5G01277 Aquilegia oxysepala HOM05D004348 ORTHO05D006191 9.7e-08 62.4 222 26.6
Mapoly0074s0030 Marchantia polymorpha HOM05D011080 ORTHO05D254173 9.7e-08 62.4 280 25.4
ClCG05G019730 Citrullus lanatus HOM05D004348 ORTHO05D006191 1.3e-07 62.0 281 25.6
Sed0015301 Sechium edule HOM05D004348 ORTHO05D006191 1.3e-07 62.0 240 27.1
MD15G1086600 Malus domestica HOM05D004348 ORTHO05D006191 1.7e-07 61.6 280 25.7
Peaxi162Scf00528g00825 Petunia axillaris HOM05D004348 ORTHO05D006191 1.7e-07 61.6 237 25.7
Os03g0185500 Oryza sativa ssp. japonica HOM05D004348 ORTHO05D006191 2.2e-07 61.2 291 26.1
Solyc04g079280.4 Solanum lycopersicum HOM05D004348 ORTHO05D006191 2.2e-07 61.2 237 27.0
Sopen04g032870 Solanum pennellii HOM05D004348 ORTHO05D006191 2.2e-07 61.2 237 27.0
CsaV3_4G034150 Cucumis sativus L. HOM05D004348 ORTHO05D006191 2.8e-07 60.8 323 24.8
HanXRQChr02g0038751 Helianthus annuus HOM05D004348 ORTHO05D006191 3.7e-07 60.5 284 25.4
PSO675G6987 Papaver somniferum HOM05D004348 ORTHO05D006191 3.7e-07 60.5 205 28.8
Phvul.001G020000 Phaseolus vulgaris HOM05D004348 ORTHO05D006191 3.7e-07 60.5 240 29.2
PGSC0003DMG400007988 Solanum tuberosum HOM05D004348 ORTHO05D006191 3.7e-07 60.5 237 27.0
ECA247G1923 Erigeron canadensis HOM05D004348 ORTHO05D006191 4.8e-07 60.1 277 26.0
CAN.G371.44 Capsicum annuum HOM05D004348 ORTHO05D006191 8.2e-07 59.3 237 26.6
Migut.N02696 Erythranthe guttata HOM05D004348 ORTHO05D006191 8.2e-07 59.3 290 24.5
FvH4_2g34840 Fragaria vesca HOM05D004348 ORTHO05D006191 8.2e-07 59.3 288 24.7
MD08G1105600 Malus domestica HOM05D004348 ORTHO05D006191 8.2e-07 59.3 280 26.1
Sabra14G0024200 Salix brachista HOM05D004348 ORTHO05D006191 8.2e-07 59.3 158 30.4
Sed0012719 Sechium edule HOM05D004348 ORTHO05D006191 8.2e-07 59.3 243 26.7
Lj4A53T53 Lonicera japonica HOM05D004348 ORTHO05D006191 1.1e-06 58.9 241 27.8
FAN27G3414 Fragaria x ananassa HOM05D004348 ORTHO05D006191 1.4e-06 58.5 247 25.5
Oeu057258.1 Olea europaea HOM05D004348 ORTHO05D006191 1.4e-06 58.5 247 27.1
MELO3C016737.2 Cucumis melo HOM05D004348 ORTHO05D006191 1.8e-06 58.2 203 27.6
MSTRG.22274 Avicennia marina HOM05D004348 ORTHO05D006191 2.4e-06 57.8 154 30.5
arahy.Tifrunner.gnm1.ann1.2EEB7P Arachis hypogaea HOM05D004348 ORTHO05D006191 4.1e-06 57.0 309 25.6
arahy.Tifrunner.gnm1.ann1.3D95JG Arachis hypogaea HOM05D004348 ORTHO05D006191 4.1e-06 57.0 309 25.6
Cc10_g04460 Coffea canephora HOM05D004348 ORTHO05D006191 5.3e-06 56.6 150 29.3
Glyma.14G081100 Glycine max HOM05D004348 ORTHO05D006191 5.3e-06 56.6 150 30.7
Glyma.17G244300 Glycine max HOM05D004348 ORTHO05D006191 7.0e-06 56.2 202 25.7
Pp3c17_5660 Physcomitrium patens HOM05D004348 ORTHO05D006191 7.0e-06 56.2 109 30.3


User provided reference genes

Program Settings