Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0145s0018 Marchantia polymorpha HOM05D007174 ORTHO05D009061 3.6e-152 541.6 276 100.0
Pp3c13_6960 Physcomitrium patens HOM05D007174 ORTHO05D009061 8.7e-66 254.6 220 57.7
AagrBONN_evm.TU.Sc2ySwM_228.5753 Anthoceros agrestis HOM05D007174 ORTHO05D009061 1.0e-58 231.1 208 56.7
Pp3c4_22170 Physcomitrium patens HOM05D007174 ORTHO05D009061 5.1e-58 228.8 217 52.5
AUR62016040 Chenopodium quinoa HOM05D007174 ORTHO05D009061 1.4e-55 220.7 199 52.3
SalBow4G1508 Salvia bowleyana HOM05D007174 ORTHO05D009061 9.0e-55 218.0 193 53.9
Nitab4.5_0000832g0170 Nicotiana tabacum HOM05D007174 ORTHO05D009061 5.8e-54 215.3 177 57.1
SMO137G0111 Selaginella moellendorffii HOM05D007174 ORTHO05D009061 5.8e-54 215.3 193 56.5
Peaxi162Scf00648g00220 Petunia axillaris HOM05D007174 ORTHO05D009061 7.6e-54 214.9 177 57.1
Migut.F00385 Erythranthe guttata HOM05D007174 ORTHO05D009061 1.0e-53 214.5 245 46.1
FAN06G1461 Fragaria x ananassa HOM05D000059 ORTHO05D005093 1.0e-53 214.5 196 54.6
Gorai.008G280800 Gossypium raimondii HOM05D007174 ORTHO05D009061 1.0e-53 214.5 176 58.5
Gohir.A12G261100 Gossypium hirsutum HOM05D007174 ORTHO05D009061 1.3e-53 214.2 176 58.5
Nitab4.5_0008764g0010 Nicotiana tabacum HOM05D007174 ORTHO05D009061 1.7e-53 213.8 177 56.5
PGR142G4376 Punica granatum HOM05D007174 ORTHO05D009061 2.2e-53 213.4 199 53.3
CAN.G548.22 Capsicum annuum HOM05D007174 ORTHO05D009061 2.9e-53 213.0 177 56.5
Sed0014335 Sechium edule HOM05D002642 ORTHO05D002834 3.8e-53 212.6 197 51.8
PGSC0003DMG400014262 Solanum tuberosum HOM05D007174 ORTHO05D009061 3.8e-53 212.6 178 56.7
FvH4_7g28911 Fragaria vesca HOM05D007174 ORTHO05D009061 6.5e-53 211.8 196 54.1
FAN03G3394 Fragaria x ananassa HOM05D000059 ORTHO05D005093 1.1e-52 211.1 196 54.6
CSS0029278 Camellia sinensis var. sinensis HOM05D007174 ORTHO05D009061 2.5e-52 209.9 180 55.6
CsaV3_3G016740 Cucumis sativus L. HOM05D007174 ORTHO05D009061 2.5e-52 209.9 217 48.4
CSS0030546 Camellia sinensis var. sinensis HOM05D007174 ORTHO05D009061 3.2e-52 209.5 180 55.6
Thecc.03G169500 Theobroma cacao HOM05D007174 ORTHO05D009061 3.2e-52 209.5 176 56.2
Duzib205G1938 Durio zibethinus HOM05D007174 ORTHO05D009061 4.2e-52 209.1 176 57.4
Eucgr.K00215 Eucalyptus grandis HOM05D007174 ORTHO05D009061 4.2e-52 209.1 196 53.6
MSTRG.27141 Avicennia marina HOM05D007174 ORTHO05D009061 5.5e-52 208.8 197 52.3
COL.COLO4_14250 Corchorus olitorius HOM05D000059 ORTHO05D005093 5.5e-52 208.8 176 58.5
QL09p015458 Quercus lobata HOM05D007174 ORTHO05D009061 5.5e-52 208.8 196 52.0
FAN01G2691 Fragaria x ananassa HOM05D000059 ORTHO05D005093 7.1e-52 208.4 196 53.6
CSS0008795 Camellia sinensis var. sinensis HOM05D007174 ORTHO05D009061 9.3e-52 208.0 183 55.2
MELO3C006867.2 Cucumis melo HOM05D007174 ORTHO05D009061 9.3e-52 208.0 198 50.0
HanXRQChr15g0473391 Helianthus annuus HOM05D000003 ORTHO05D000004 9.3e-52 208.0 180 56.1
Rhsim09G0195900 Rhododendron simsii HOM05D007174 ORTHO05D009061 9.3e-52 208.0 193 51.8
Sopen03g005220 Solanum pennellii HOM05D007174 ORTHO05D009061 9.3e-52 208.0 176 55.1
CBR_g53539 Chara braunii HOM05D007174 ORTHO05D009061 1.2e-51 207.6 183 57.4
FAN03G1635 Fragaria x ananassa HOM05D000059 ORTHO05D005093 1.2e-51 207.6 196 54.1
Potri.012G134500 Populus trichocarpa HOM05D007174 ORTHO05D009061 1.2e-51 207.6 180 55.0
SEGI_06842 Sequoiadendron giganteum HOM05D007174 ORTHO05D009061 1.2e-51 207.6 199 52.3
Sabra12G0101100 Salix brachista HOM05D007174 ORTHO05D009061 1.6e-51 207.2 180 56.1
EL10Ac3g05680 Beta vulgaris HOM05D007174 ORTHO05D009061 2.1e-51 206.8 198 48.0
Manes.14G029900 Manihot esculenta HOM05D007174 ORTHO05D009061 2.7e-51 206.5 180 54.4
vmacro09863 Vaccinium macrocarpon HOM05D007174 ORTHO05D009061 2.7e-51 206.5 191 51.8
Ciclev10005753m.g Citrus clementina HOM05D007174 ORTHO05D009061 3.5e-51 206.1 197 50.8
TAR374G0585 Trochodendron aralioides HOM05D007174 ORTHO05D009061 6.0e-51 205.3 189 51.9
MD01G1195800 Malus domestica HOM05D007174 ORTHO05D009061 7.9e-51 204.9 180 53.9
FAN10G2932 Fragaria x ananassa HOM05D000059 ORTHO05D005093 1.0e-50 204.5 196 52.6
Zm00001eb187200 Zea mays HOM05D007174 ORTHO05D009061 1.0e-50 204.5 273 44.3
RcHm_v2.0_Chr1g0376581 Rosa chinensis HOM05D007174 ORTHO05D009061 1.3e-50 204.1 196 53.6
Lsat_1_v5_gn_9_53840 Lactuca sativa HOM05D007174 ORTHO05D009061 3.0e-50 203.0 180 55.0
Dinv35170 Davidia involucrata HOM05D007174 ORTHO05D009061 3.9e-50 202.6 196 51.0
Cpa.g.sc3.335 Carica papaya HOM05D007174 ORTHO05D009061 5.1e-50 202.2 199 50.8
ClCG05G007760 Citrullus lanatus HOM05D002642 ORTHO05D002834 5.1e-50 202.2 179 53.1
Glyma.16G199500 Glycine max HOM05D007174 ORTHO05D009061 1.1e-49 201.1 181 53.6
Sc25g0000350 Simmondsia chinensis HOM05D007174 ORTHO05D009061 1.1e-49 201.1 174 55.2
CiPaw.04G068400 Carya illinoinensis HOM05D007174 ORTHO05D009061 1.5e-49 200.7 197 51.3
Os02g0677600 Oryza sativa ssp. japonica HOM05D007174 ORTHO05D009061 1.5e-49 200.7 186 53.8
Prupe.2G289100 Prunus persica HOM05D007174 ORTHO05D009061 1.9e-49 200.3 209 48.8
Lj2g0011010 Lotus japonicus HOM05D007174 ORTHO05D009061 4.3e-49 199.1 180 52.2
CANSAT21G1580 Cannabis sativa HOM05D007174 ORTHO05D009061 5.7e-49 198.7 207 48.8
Glyma.09G147500 Glycine max HOM05D007174 ORTHO05D009061 5.7e-49 198.7 180 53.9
Lalb_Chr19g0131081 Lupinus albus HOM05D007174 ORTHO05D009061 5.7e-49 198.7 180 53.3
Phvul.004G122400 Phaseolus vulgaris HOM05D007174 ORTHO05D009061 5.7e-49 198.7 199 48.2
Aqoxy7G00468 Aquilegia oxysepala HOM05D007174 ORTHO05D009061 2.2e-48 196.8 194 51.5
GSVIVG01010637001 Vitis vinifera HOM05D007174 ORTHO05D009061 2.2e-48 196.8 204 50.0
Nn1g01328 Nelumbo nucifera HOM05D007174 ORTHO05D009061 3.7e-48 196.1 178 53.9
MBI04_g40843_MAGBIO Magnolia biondii HOM05D007174 ORTHO05D009061 4.8e-48 195.7 178 51.7
ATR0757G135 Amborella trichopoda HOM05D007174 ORTHO05D009061 6.3e-48 195.3 178 52.2
arahy.Tifrunner.gnm1.ann1.CGP099 Arachis hypogaea HOM05D007174 ORTHO05D009061 6.3e-48 195.3 178 52.2
VMungo0464G0116 Vigna mungo HOM05D007174 ORTHO05D009061 6.3e-48 195.3 199 47.7
Lj6g0017578 Lotus japonicus HOM05D007174 ORTHO05D009061 1.1e-47 194.5 180 51.1
TPR.G9185 Trifolium pratense HOM05D007174 ORTHO05D009061 1.4e-47 194.1 179 52.0
DCAR_018153 Daucus carota HOM05D007174 ORTHO05D009061 1.8e-47 193.7 198 46.0
arahy.Tifrunner.gnm1.ann1.AW02WS Arachis hypogaea HOM05D007174 ORTHO05D009061 2.4e-47 193.4 178 52.2
Medtr6g465290 Medicago truncatula HOM05D007174 ORTHO05D009061 3.1e-47 193.0 176 53.4
Lj1A990G55 Lonicera japonica HOM05D007174 ORTHO05D009061 9.0e-47 191.4 180 48.9
Actinidia03101 Actinidia chinensis HOM05D007174 ORTHO05D009061 1.5e-46 190.7 168 55.4
Cc02_g03460 Coffea canephora HOM05D007174 ORTHO05D009061 2.6e-46 189.9 254 41.7
BcaB07g29797 Brassica carinata HOM05D007174 ORTHO05D009061 5.9e-46 188.7 204 48.5
SGA_v2.0_scaffold2G01087 Striga asiatica HOM05D007174 ORTHO05D009061 1.0e-45 188.0 197 50.8
Atru.chr1.537 Acer truncatum HOM05D007174 ORTHO05D009061 1.7e-45 187.2 182 51.6
Dinv28496 Davidia involucrata HOM05D000059 ORTHO05D005093 5.0e-45 185.7 216 45.8
THA.LOC104826810 Tarenaya hassleriana HOM05D007174 ORTHO05D009061 5.0e-45 185.7 194 47.4
Psat1g105240 Pisum sativum HOM05D007174 ORTHO05D009061 8.5e-45 184.9 186 49.5
TWI23G0481 Tripterygium wilfordii HOM05D007174 ORTHO05D009061 2.5e-44 183.3 204 46.6
CSS0030220 Camellia sinensis var. sinensis HOM05D007174 ORTHO05D009061 3.2e-44 183.0 180 51.7
A02p42000 Brassica napus HOM05D007174 ORTHO05D009061 5.5e-44 182.2 204 49.0
BraA02t09135Z Brassica rapa HOM05D007174 ORTHO05D009061 5.5e-44 182.2 204 49.0
Haze_13772 Corylus avellana HOM05D007174 ORTHO05D009061 2.7e-43 179.9 194 49.0
Carub.0008s2281 Capsella rubella HOM05D007174 ORTHO05D009061 3.6e-43 179.5 200 46.5
BcaC03g18123 Brassica carinata HOM05D007174 ORTHO05D009061 4.6e-43 179.1 204 46.6
BolC2t12246H Brassica oleracea HOM05D007174 ORTHO05D009061 4.6e-43 179.1 204 46.6
AL8G38920 Arabidopsis lyrata HOM05D007174 ORTHO05D009061 7.9e-43 178.3 200 47.0
Thhalv10004841m.g Eutrema salsugineum HOM05D007174 ORTHO05D009061 1.0e-42 177.9 201 46.8
AT5G62140 Arabidopsis thaliana HOM05D007174 ORTHO05D009061 6.7e-42 175.3 200 47.0
CARHR275910 Cardamine hirsuta HOM05D007174 ORTHO05D009061 6.7e-42 175.3 200 46.5
Sp2g25310 Schrenkiella parvula HOM05D007174 ORTHO05D009061 4.3e-41 172.6 190 48.9
arahy.Tifrunner.gnm1.ann1.09T8EW Arachis hypogaea HOM05D007174 ORTHO05D009061 1.3e-40 171.0 178 48.9
arahy.Tifrunner.gnm1.ann1.JY00AE Arachis hypogaea HOM05D007174 ORTHO05D009061 3.4e-38 162.9 173 46.8
unitig_747.g21761 Utricularia gibba HOM05D007174 ORTHO05D009061 3.4e-38 162.9 179 49.7
ECA232G4749 Erigeron canadensis HOM05D007174 ORTHO05D009061 1.7e-37 160.6 140 56.4
Oeu030133.1 Olea europaea HOM05D007174 ORTHO05D009061 5.5e-36 155.6 135 51.9
Cre01.g019600 Chlamydomonas reinhardtii HOM05D007174 ORTHO05D009061 6.1e-35 152.1 211 44.5
Sc13g0008390 Simmondsia chinensis HOM05D007174 ORTHO05D009061 2.0e-33 147.1 184 44.6
Gohir.D12G262000 Gossypium hirsutum HOM05D007174 ORTHO05D009061 7.4e-33 145.2 175 44.6
EL10Ac3g05682 Beta vulgaris HOM05D007174 ORTHO05D009061 1.2e-30 137.9 214 36.0
Pp3c26_1960 Physcomitrium patens HOM05D007174 ORTHO05D009061 3.6e-27 126.3 141 48.9
AUR62021246 Chenopodium quinoa HOM05D007174 ORTHO05D009061 1.5e-25 120.9 87 64.4
HanXRQChr15g0482681 Helianthus annuus HOM05D007174 ORTHO05D009061 4.2e-20 102.8 141 44.0
Sc13g0008380 Simmondsia chinensis HOM05D007174 ORTHO05D009061 7.2e-20 102.1 185 34.1
arahy.Tifrunner.gnm1.ann1.U0QS20 Arachis hypogaea HOM05D007174 ORTHO05D009061 4.7e-19 99.4 169 35.5
arahy.Tifrunner.gnm1.ann1.BIF85U Arachis hypogaea HOM05D007174 ORTHO05D009061 7.5e-17 92.0 82 48.8
MCO06G097 Micromonas commoda HOM05D007174 ORTHO05D009061 1.1e-15 88.2 125 41.6
Solyc03g026330.4 Solanum lycopersicum HOM05D007174 ORTHO05D009061 1.1e-15 88.2 88 46.6
Aa31LG11G1430 Aethionema arabicum HOM05D007174 ORTHO05D009061 2.9e-13 80.1 64 56.2
CDE01G0613 Ceratophyllum demersum HOM05D007174 ORTHO05D009061 2.3e-10 70.5 109 37.6
SEGI_30770 Sequoiadendron giganteum HOM05D000501 ORTHO05D009061 2.3e-10 70.5 68 48.5
Cre10.g463800 Chlamydomonas reinhardtii HOM05D007174 ORTHO05D009061 1.3e-08 64.7 192 30.2


User provided reference genes

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