Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0142s0032 Marchantia polymorpha HOM05D006941 ORTHO05D008361 2.1e-29 131.7 68 100.0
Pp3c4_20400 Physcomitrium patens HOM05D006941 ORTHO05D008361 2.3e-07 58.5 52 51.9
Os11g0107450 Oryza sativa ssp. japonica HOM05D006941 ORTHO05D008361 6.6e-07 57.0 52 57.7
Zm00001eb094170 Zea mays HOM05D006941 ORTHO05D008361 1.1e-06 56.2 52 55.8
Zm00001eb163280 Zea mays HOM05D006941 ORTHO05D008361 1.1e-06 56.2 52 55.8
Glyma.13G132200 Glycine max HOM05D006941 ORTHO05D008361 1.9e-06 55.5 37 64.9
PSO302G0016 Papaver somniferum HOM05D006941 ORTHO05D008361 1.9e-06 55.5 37 64.9
Migut.G00223 Erythranthe guttata HOM05D006941 ORTHO05D008361 2.5e-06 55.1 52 55.8
Lj5g0014316 Lotus japonicus HOM05D006941 ORTHO05D008361 2.5e-06 55.1 37 64.9
Rhsim02G0014500 Rhododendron simsii HOM05D006941 ORTHO05D008361 2.5e-06 55.1 47 61.7
SEGI_10041 Sequoiadendron giganteum HOM05D006941 ORTHO05D008361 2.5e-06 55.1 49 55.1
CAN.G1327.4 Capsicum annuum HOM05D006941 ORTHO05D008361 3.3e-06 54.7 53 56.6
CDE02G1545 Ceratophyllum demersum HOM05D006941 ORTHO05D008361 3.3e-06 54.7 37 64.9
Glyma.10G044600 Glycine max HOM05D006941 ORTHO05D008361 3.3e-06 54.7 37 62.2
Nitab4.5_0001624g0050 Nicotiana tabacum HOM05D006941 ORTHO05D008361 3.3e-06 54.7 53 56.6
Peaxi162Scf01067g00024 Petunia axillaris HOM05D006941 ORTHO05D008361 3.3e-06 54.7 53 56.6
PGR004G2827 Punica granatum HOM05D006941 ORTHO05D008361 3.3e-06 54.7 52 55.8
Solyc01g067820.3 Solanum lycopersicum HOM05D006941 ORTHO05D008361 3.3e-06 54.7 53 56.6
PGSC0003DMG400022846 Solanum tuberosum HOM05D006941 ORTHO05D008361 3.3e-06 54.7 53 56.6
EL10As5g23584 Beta vulgaris HOM05D006941 ORTHO05D008361 4.2e-06 54.3 53 60.4
Medtr1g068580 Medicago truncatula HOM05D006941 ORTHO05D008361 4.2e-06 54.3 52 53.8
Os12g0106550 Oryza sativa ssp. japonica HOM05D006941 ORTHO05D008361 4.2e-06 54.3 52 53.8
Phvul.010G109000 Phaseolus vulgaris HOM05D006941 ORTHO05D008361 4.2e-06 54.3 37 62.2
Phvul.L002281 Phaseolus vulgaris HOM05D006941 ORTHO05D008361 4.2e-06 54.3 37 62.2
Potri.005G071700 Populus trichocarpa HOM05D006941 ORTHO05D008361 4.2e-06 54.3 47 57.4
QL06p006942 Quercus lobata HOM05D006941 ORTHO05D008361 4.2e-06 54.3 37 64.9
AagrBONN_evm.TU.Sc2ySwM_344.628 Anthoceros agrestis HOM05D006941 ORTHO05D008361 5.5e-06 53.9 45 53.3
Gohir.A02G045400 Gossypium hirsutum HOM05D006941 ORTHO05D008361 5.5e-06 53.9 52 53.8
Gohir.D02G051400 Gossypium hirsutum HOM05D006941 ORTHO05D008361 5.5e-06 53.9 52 53.8
Gorai.005G056700 Gossypium raimondii HOM05D006941 ORTHO05D008361 5.5e-06 53.9 52 53.8
Lalb_Chr14g0364951 Lupinus albus HOM05D006941 ORTHO05D008361 5.5e-06 53.9 52 53.8
Lalb_Chr22g0358511 Lupinus albus HOM05D006941 ORTHO05D008361 5.5e-06 53.9 52 51.9
Phvul.007G158300 Phaseolus vulgaris HOM05D006941 ORTHO05D008361 5.5e-06 53.9 37 59.5
Sopen01g029770 Solanum pennellii HOM05D006941 ORTHO05D008361 5.5e-06 53.9 53 54.7
Aa31LG10G16360 Aethionema arabicum HOM05D006941 ORTHO05D008361 7.2e-06 53.5 53 56.6
Duzib151G0434 Durio zibethinus HOM05D006941 ORTHO05D008361 7.2e-06 53.5 52 55.8
Manes.14G117300 Manihot esculenta HOM05D006941 ORTHO05D008361 7.2e-06 53.5 47 59.6
unitig_22.g6332 Utricularia gibba HOM05D006941 ORTHO05D008361 7.2e-06 53.5 52 53.8
Actinidia32379 Actinidia chinensis HOM05D006941 ORTHO05D008361 9.5e-06 53.1 47 57.4
CiPaw.02G087700 Carya illinoinensis HOM05D006941 ORTHO05D008361 9.5e-06 53.1 61 42.6
Manes.03G190000 Manihot esculenta HOM05D006941 ORTHO05D008361 9.5e-06 53.1 47 57.4
SalBow1G8344 Salvia bowleyana HOM05D006941 ORTHO05D008361 9.5e-06 53.1 52 53.8


User provided reference genes

Program Settings