Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0141s0034 Marchantia polymorpha HOM05D001750 ORTHO05D001825 6.5e-31 136.7 68 100.0
RhsimMtG0004100 Rhododendron simsii HOM05D001750 ORTHO05D001825 9.1e-17 89.7 64 68.8
SGA_v2.0_scaffold245G44452 Striga asiatica HOM05D001750 ORTHO05D001825 3.5e-16 87.8 64 65.6
arahy.Tifrunner.gnm1.ann1.KJ11LV Arachis hypogaea HOM05D001750 ORTHO05D001825 4.5e-16 87.4 64 68.8
HanXRQMTg0579361 Helianthus annuus HOM05D001750 ORTHO05D001825 5.9e-16 87.0 64 67.2
SabraMtG0002600 Salix brachista HOM05D001750 ORTHO05D001825 5.9e-16 87.0 64 67.2
TPR.G18545 Trifolium pratense HOM05D001750 ORTHO05D001825 5.9e-16 87.0 64 67.2
ATMG00513 Arabidopsis thaliana HOM05D001750 ORTHO05D001825 1.0e-15 86.3 64 67.2
BolSC28t60419H Brassica oleracea HOM05D001750 ORTHO05D001825 1.0e-15 86.3 64 67.2
BraSC224t45818Z Brassica rapa HOM05D001750 ORTHO05D001825 1.0e-15 86.3 64 67.2
BraSC77t46634Z Brassica rapa HOM05D001750 ORTHO05D001825 1.0e-15 86.3 64 67.2
PSO017G5352 Papaver somniferum HOM05D001750 ORTHO05D001825 1.0e-15 86.3 64 65.6
MBI05_g05342_MAGBIO Magnolia biondii HOM05D001750 ORTHO05D001825 3.8e-15 84.3 64 64.1
MBI06_g25392_MAGBIO Magnolia biondii HOM05D001750 ORTHO05D001825 3.8e-15 84.3 64 64.1
AUR62042330 Chenopodium quinoa HOM05D006320 ORTHO05D007069 7.2e-14 80.1 60 66.7
FvH4_6g34420 Fragaria vesca HOM05D001750 ORTHO05D001825 1.2e-13 79.3 62 64.5
Lalb_Chr02g0153691 Lupinus albus HOM05D001750 ORTHO05D001825 1.6e-13 79.0 64 57.8
Aa31sc483G10 Aethionema arabicum HOM05D001750 ORTHO05D001825 2.7e-13 78.2 62 62.9
Gorai.001G163400 Gossypium raimondii HOM05D001750 ORTHO05D001825 3.6e-13 77.8 56 67.9
SHI48909 Sapria himalayana HOM05D001750 ORTHO05D001825 1.5e-11 72.4 58 63.8
Nitab4.5_0001788g0200 Nicotiana tabacum HOM05D001750 ORTHO05D001825 5.7e-11 70.5 57 61.4
SHI23848 Sapria himalayana HOM05D001750 ORTHO05D001825 2.2e-10 68.6 62 54.8
Nitab4.5_0000172g1800 Nicotiana tabacum HOM05D001750 ORTHO05D001825 1.4e-09 65.9 59 54.2
Nitab4.5_0000172g0080 Nicotiana tabacum HOM05D001750 ORTHO05D001825 1.8e-09 65.5 58 53.4
Nitab4.5_0001152g0440 Nicotiana tabacum HOM05D005210 ORTHO05D010080 5.4e-09 63.9 56 53.6
Nitab4.5_0000593g0150 Nicotiana tabacum HOM05D005210 ORTHO05D010080 1.0e-07 59.7 58 51.7
Lalb_Chr16g0386151 Lupinus albus HOM05D001750 ORTHO05D001825 1.3e-07 59.3 43 67.4
Lalb_Chr17g0337351 Lupinus albus HOM05D001750 ORTHO05D001825 6.6e-07 57.0 41 68.3
BolSC28t60385H Brassica oleracea HOM05D010793 ORTHO05D001825 4.2e-06 54.3 40 70.0
SHI35587 Sapria himalayana HOM05D008193 ORTHO05D010324 5.5e-06 53.9 48 62.5


User provided reference genes

Program Settings