Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0141s0006 Marchantia polymorpha HOM05D006672 ORTHO05D007769 7.5e-89 330.5 165 100.0
AagrBONN_evm.TU.Sc2ySwM_362.2137 Anthoceros agrestis HOM05D006672 ORTHO05D007769 3.4e-25 119.0 178 44.4
Pp3c1_40010 Physcomitrium patens HOM05D006672 ORTHO05D007769 1.8e-21 106.7 172 41.9
Nn8g39154 Nelumbo nucifera HOM05D006672 ORTHO05D007769 5.8e-17 91.7 190 40.0
SMO364G0119 Selaginella moellendorffii HOM05D006672 ORTHO05D007769 6.4e-16 88.2 156 41.0
SEGI_22972 Sequoiadendron giganteum HOM05D006672 ORTHO05D007769 1.2e-14 84.0 180 37.2
SGA_v2.0_scaffold4G02004 Striga asiatica HOM05D006672 ORTHO05D007769 2.1e-14 83.2 141 41.1
FvH4_6g31600 Fragaria vesca HOM05D006672 ORTHO05D007769 2.7e-14 82.8 154 39.6
ECA234G2073 Erigeron canadensis HOM05D006672 ORTHO05D007769 1.1e-12 77.4 154 38.3
FAN09G1670 Fragaria x ananassa HOM05D006672 ORTHO05D007769 2.5e-12 76.3 152 39.5
TAR636G2852 Trochodendron aralioides HOM05D006672 ORTHO05D007769 2.5e-12 76.3 133 39.8
MBI04_g22016_MAGBIO Magnolia biondii HOM05D006672 ORTHO05D007769 4.3e-12 75.5 179 36.3
Prupe.3G068600 Prunus persica HOM05D006672 ORTHO05D007769 5.6e-12 75.1 161 36.6
FAN14G5379 Fragaria x ananassa HOM05D006672 ORTHO05D007769 7.4e-12 74.7 155 38.1
RcHm_v2.0_Chr2g0138661 Rosa chinensis HOM05D006672 ORTHO05D007769 7.4e-12 74.7 155 39.4
HanXRQChr10g0313401 Helianthus annuus HOM05D006672 ORTHO05D007769 1.3e-11 73.9 170 36.5
Migut.D01021 Erythranthe guttata HOM05D006672 ORTHO05D007769 1.6e-11 73.6 168 36.9
SalBow1G8254 Salvia bowleyana HOM05D000380 ORTHO05D000561 2.1e-11 73.2 176 37.5
Actinidia24746 Actinidia chinensis HOM05D006672 ORTHO05D007769 2.8e-11 72.8 121 41.3
DCAR_026329 Daucus carota HOM05D006672 ORTHO05D007769 2.8e-11 72.8 150 37.3
Cc04_g03140 Coffea canephora HOM05D006672 ORTHO05D007769 3.7e-11 72.4 141 38.3
Potri.003G053500 Populus trichocarpa HOM05D006672 ORTHO05D007769 3.7e-11 72.4 158 39.2
Sp1g13550 Schrenkiella parvula HOM05D006672 ORTHO05D007769 4.8e-11 72.0 170 37.6
unitig_899.g14774 Utricularia gibba HOM05D006672 ORTHO05D007769 4.8e-11 72.0 174 34.5
Nitab4.5_0008314g0010 Nicotiana tabacum HOM05D006672 ORTHO05D007769 6.2e-11 71.6 131 41.2
TWI12G1441 Tripterygium wilfordii HOM05D006672 ORTHO05D007769 1.1e-10 70.9 173 35.8
Manes.04G128475 Manihot esculenta HOM05D006672 ORTHO05D007769 1.8e-10 70.1 155 38.1
DCAR_022631 Daucus carota HOM05D006672 ORTHO05D007769 2.4e-10 69.7 163 35.6
Nitab4.5_0001315g0240 Nicotiana tabacum HOM05D006672 ORTHO05D007769 4.0e-10 68.9 166 36.7
Cfa009362 Carpinus fangiana HOM05D006672 ORTHO05D007769 5.3e-10 68.6 144 38.2
Dinv30493 Davidia involucrata HOM05D006672 ORTHO05D007769 9.0e-10 67.8 158 34.2
FAN05G5736 Fragaria x ananassa HOM05D006672 ORTHO05D007769 9.0e-10 67.8 156 33.3
THA.LOC104800426 Tarenaya hassleriana HOM05D006672 ORTHO05D007769 1.5e-09 67.0 163 37.4
Gorai.009G134300 Gossypium raimondii HOM05D006672 ORTHO05D007769 2.0e-09 66.6 142 38.7
MSTRG.22671 Avicennia marina HOM05D006672 ORTHO05D007769 3.4e-09 65.9 158 34.2
Sopen03g039560 Solanum pennellii HOM05D006672 ORTHO05D007769 3.4e-09 65.9 164 34.8
Solyc03g120740.1 Solanum lycopersicum HOM05D006672 ORTHO05D007769 4.5e-09 65.5 164 34.8
Thecc.06G091100 Theobroma cacao HOM05D006672 ORTHO05D007769 4.5e-09 65.5 165 38.2
COL.COLO4_30405 Corchorus olitorius HOM05D006672 ORTHO05D007769 5.8e-09 65.1 177 33.9
Oeu040367.1 Olea europaea HOM05D006672 ORTHO05D007769 5.8e-09 65.1 174 32.8
Gohir.D05G130600 Gossypium hirsutum HOM05D006672 ORTHO05D007769 7.6e-09 64.7 142 38.0
MD17G1192500 Malus domestica HOM05D006672 ORTHO05D007769 7.6e-09 64.7 171 33.9
Rhsim12G0199700 Rhododendron simsii HOM05D006672 ORTHO05D007769 7.6e-09 64.7 167 36.5
Sabra03G0029900 Salix brachista HOM05D006672 ORTHO05D007769 1.3e-08 63.9 150 38.7
Ah.01g021520 Amaranthus hybridus HOM05D006672 ORTHO05D007769 1.7e-08 63.5 133 36.1
AT1G15230 Arabidopsis thaliana HOM05D006672 ORTHO05D007769 2.2e-08 63.2 170 33.5
Carub.0001s1499 Capsella rubella HOM05D006672 ORTHO05D007769 2.9e-08 62.8 133 39.1
QL05p022164 Quercus lobata HOM05D006672 ORTHO05D007769 3.8e-08 62.4 173 34.1
TWI75G0771 Tripterygium wilfordii HOM05D006672 ORTHO05D007769 3.8e-08 62.4 152 37.5
AUR62011637 Chenopodium quinoa HOM05D006672 ORTHO05D007769 4.9e-08 62.0 131 36.6
AL1G27320 Arabidopsis lyrata HOM05D006672 ORTHO05D007769 8.4e-08 61.2 172 33.1
BcaB03g13070 Brassica carinata HOM05D005761 ORTHO05D007286 8.4e-08 61.2 119 39.5
BraA06t24303Z Brassica rapa HOM05D006672 ORTHO05D007769 1.1e-07 60.8 168 32.7
Haze_12408 Corylus avellana HOM05D006672 ORTHO05D007769 1.1e-07 60.8 161 35.4
CARHR015760 Cardamine hirsuta HOM05D006672 ORTHO05D007769 1.4e-07 60.5 146 37.7
CiPaw.02G149600 Carya illinoinensis HOM05D006672 ORTHO05D007769 1.4e-07 60.5 140 36.4
Hma1.2p1_2022F.1_g311340 Hydrangea macrophylla HOM05D006672 ORTHO05D007769 1.4e-07 60.5 167 34.7
Gohir.A05G131200 Gossypium hirsutum HOM05D006672 ORTHO05D007769 2.5e-07 59.7 142 37.3
EL10Ac9g22019 Beta vulgaris HOM05D000202 ORTHO05D000117 5.5e-07 58.5 163 33.1
Ciclev10026595m.g Citrus clementina HOM05D006672 ORTHO05D007769 5.5e-07 58.5 145 36.6
A06p11230 Brassica napus HOM05D006672 ORTHO05D007769 9.3e-07 57.8 168 32.7
Ca_20375_v3 Cicer arietinum L. HOM05D006672 ORTHO05D007769 9.3e-07 57.8 110 38.2
ClCG07G013120 Citrullus lanatus HOM05D006672 ORTHO05D007769 9.3e-07 57.8 138 37.0
CANSAT56G0062 Cannabis sativa HOM05D006672 ORTHO05D007769 1.2e-06 57.4 155 34.8
Lalb_Chr25g0279941 Lupinus albus HOM05D006672 ORTHO05D007769 1.6e-06 57.0 107 38.3
Atru.chr1.3318 Acer truncatum HOM05D006672 ORTHO05D007769 2.1e-06 56.6 136 34.6
Lsat_1_v5_gn_2_34400 Lactuca sativa HOM05D008424 ORTHO05D007769 2.1e-06 56.6 169 31.4
Aa31LG7G40 Aethionema arabicum HOM05D006672 ORTHO05D007769 2.7e-06 56.2 137 36.5
Aqoxy7G01641 Aquilegia oxysepala HOM05D006672 ORTHO05D007769 2.7e-06 56.2 177 33.3
arahy.Tifrunner.gnm1.ann1.MVJ1PZ Arachis hypogaea HOM05D006672 ORTHO05D007769 4.6e-06 55.5 168 31.0
arahy.Tifrunner.gnm1.ann1.N61AC9 Arachis hypogaea HOM05D006672 ORTHO05D007769 4.6e-06 55.5 125 33.6
BcaC05g25464 Brassica carinata HOM05D006672 ORTHO05D007769 4.6e-06 55.5 107 37.4
Duzib160G0370 Durio zibethinus HOM05D000726 ORTHO05D007769 4.6e-06 55.5 155 34.8
Actinidia08988 Actinidia chinensis HOM05D000726 ORTHO05D007769 6.0e-06 55.1 147 36.7
CDE05G1278 Ceratophyllum demersum HOM05D000726 ORTHO05D000799 6.0e-06 55.1 74 45.9
MELO3C012968.2 Cucumis melo HOM05D006672 ORTHO05D007769 6.0e-06 55.1 140 36.4
Lsat_1_v5_gn_5_130760 Lactuca sativa HOM05D006672 ORTHO05D007769 6.0e-06 55.1 114 39.5
PGSC0003DMG400040414 Solanum tuberosum HOM05D006672 ORTHO05D007769 6.0e-06 55.1 90 40.0
BcaC05g25452 Brassica carinata HOM05D006672 ORTHO05D007769 7.9e-06 54.7 169 32.0
C05p13360 Brassica napus HOM05D006672 ORTHO05D007769 7.9e-06 54.7 169 32.0
Glyma.08G205200 Glycine max HOM05D006672 ORTHO05D007769 7.9e-06 54.7 129 37.2
TPR.G17666 Trifolium pratense HOM05D006672 ORTHO05D007769 7.9e-06 54.7 120 40.0


User provided reference genes

Program Settings