Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0140s0031 Marchantia polymorpha HOM05D006434 ORTHO05D008069 1.2e-187 659.8 356 100.0
Pp3c7_630 Physcomitrium patens HOM05D006434 ORTHO05D008069 4.2e-89 332.4 272 60.7
AagrBONN_evm.TU.Sc2ySwM_344.3988 Anthoceros agrestis HOM05D006434 ORTHO05D008069 8.9e-71 271.6 201 66.2
SMO171G0075 Selaginella moellendorffii HOM05D006434 ORTHO05D008069 1.0e-63 248.1 204 60.3
Gohir.D07G223600 Gossypium hirsutum HOM05D006434 ORTHO05D008069 1.4e-60 237.7 208 57.7
Gorai.001G257900 Gossypium raimondii HOM05D006434 ORTHO05D008069 1.4e-60 237.7 208 57.7
AL5G18090 Arabidopsis lyrata HOM05D006434 ORTHO05D008069 4.1e-60 236.1 209 57.9
A06p40510 Brassica napus HOM05D006434 ORTHO05D008069 5.4e-60 235.7 209 56.9
C07p37520 Brassica napus HOM05D006434 ORTHO05D008069 5.4e-60 235.7 209 56.9
BolC7t44265H Brassica oleracea HOM05D006434 ORTHO05D008069 5.4e-60 235.7 209 56.9
BraA06t26970Z Brassica rapa HOM05D006434 ORTHO05D008069 5.4e-60 235.7 209 56.9
CARHR292500 Cardamine hirsuta HOM05D006434 ORTHO05D008069 9.2e-60 235.0 209 57.4
BcaC06g33735 Brassica carinata HOM05D006434 ORTHO05D008069 1.2e-59 234.6 209 57.4
PSO161G0076 Papaver somniferum HOM05D006434 ORTHO05D008069 1.2e-59 234.6 208 57.2
THA.LOC104823923 Tarenaya hassleriana HOM05D006434 ORTHO05D008069 1.6e-59 234.2 209 57.4
Carub.0005s0699 Capsella rubella HOM05D006434 ORTHO05D008069 3.5e-59 233.0 209 57.4
PSO478G2838 Papaver somniferum HOM05D006434 ORTHO05D008069 3.5e-59 233.0 208 56.7
Sed0011674 Sechium edule HOM05D006434 ORTHO05D008069 4.6e-59 232.6 212 55.7
TWI56G0494 Tripterygium wilfordii HOM05D006434 ORTHO05D008069 4.6e-59 232.6 210 56.7
Gohir.A07G216800 Gossypium hirsutum HOM05D006434 ORTHO05D008069 6.0e-59 232.3 208 56.2
Ciclev10012231m.g Citrus clementina HOM05D006434 ORTHO05D008069 1.0e-58 231.5 210 55.7
Thhalv10004634m.g Eutrema salsugineum HOM05D006434 ORTHO05D008069 1.0e-58 231.5 209 56.9
Sp2g17230 Schrenkiella parvula HOM05D006434 ORTHO05D008069 1.0e-58 231.5 209 56.9
Potri.001G349800 Populus trichocarpa HOM05D006434 ORTHO05D008069 1.3e-58 231.1 210 55.2
MELO3C021484.2 Cucumis melo HOM05D006434 ORTHO05D008069 1.7e-58 230.7 211 56.4
Sabra16G0229200 Salix brachista HOM05D006434 ORTHO05D008069 1.7e-58 230.7 210 55.2
Duzib264G0249 Durio zibethinus HOM05D006434 ORTHO05D008069 2.3e-58 230.3 208 55.3
Nitab4.5_0001727g0150 Nicotiana tabacum HOM05D006434 ORTHO05D008069 2.3e-58 230.3 208 54.8
Lj2g0012157 Lotus japonicus HOM05D006434 ORTHO05D008069 5.0e-58 229.2 210 55.7
AUR62018326 Chenopodium quinoa HOM05D006434 ORTHO05D008069 6.6e-58 228.8 207 57.5
Sc10g0004040 Simmondsia chinensis HOM05D006434 ORTHO05D008069 6.6e-58 228.8 210 55.7
TPR.G32608 Trifolium pratense HOM05D006434 ORTHO05D008069 6.6e-58 228.8 208 54.3
Aa31LG2G4610 Aethionema arabicum HOM05D006434 ORTHO05D008069 8.6e-58 228.4 209 55.5
Phvul.004G023900 Phaseolus vulgaris HOM05D006434 ORTHO05D008069 8.6e-58 228.4 210 55.2
unitig_744.g24344 Utricularia gibba HOM05D006434 ORTHO05D008069 8.6e-58 228.4 210 56.2
COL.COLO4_36989 Corchorus olitorius HOM05D006434 ORTHO05D008069 1.1e-57 228.0 210 55.7
Glyma.13G066900 Glycine max HOM05D006434 ORTHO05D008069 1.1e-57 228.0 208 54.8
CAN.G1128.11 Capsicum annuum HOM05D006434 ORTHO05D008069 1.5e-57 227.6 208 54.8
AUR62030560 Chenopodium quinoa HOM05D006434 ORTHO05D008069 1.9e-57 227.3 218 55.0
Os03g0736400 Oryza sativa ssp. japonica HOM05D006434 ORTHO05D008069 1.9e-57 227.3 208 55.8
CSS0004781 Camellia sinensis var. sinensis HOM05D006434 ORTHO05D008069 4.3e-57 226.1 208 54.8
Aqoxy3G00846 Aquilegia oxysepala HOM05D006434 ORTHO05D008069 5.6e-57 225.7 208 55.8
ECA232G4812 Erigeron canadensis HOM05D006434 ORTHO05D008069 5.6e-57 225.7 208 54.3
Peaxi162Scf00059g00128 Petunia axillaris HOM05D006434 ORTHO05D008069 5.6e-57 225.7 210 54.8
Cfa007492 Carpinus fangiana HOM05D006434 ORTHO05D008069 7.3e-57 225.3 210 54.8
Hma1.2p1_0136F.1_g062090 Hydrangea macrophylla HOM05D006434 ORTHO05D008069 7.3e-57 225.3 209 55.0
Manes.15G178000 Manihot esculenta HOM05D006434 ORTHO05D008069 7.3e-57 225.3 210 55.2
Thecc.04G069300 Theobroma cacao HOM05D006434 ORTHO05D008069 7.3e-57 225.3 210 56.2
vmacro05779 Vaccinium macrocarpon HOM05D006434 ORTHO05D008069 7.3e-57 225.3 209 56.5
Atru.chr8.2465 Acer truncatum HOM05D006434 ORTHO05D008069 9.5e-57 224.9 210 54.8
DCAR_006717 Daucus carota HOM05D006434 ORTHO05D008069 9.5e-57 224.9 210 56.2
VMungo0464G0451 Vigna mungo HOM05D006434 ORTHO05D008069 9.5e-57 224.9 211 54.5
CsaV3_5G037720 Cucumis sativus L. HOM05D006434 ORTHO05D008069 1.2e-56 224.6 211 55.0
Lalb_Chr21g0319131 Lupinus albus HOM05D006434 ORTHO05D008069 1.2e-56 224.6 205 54.1
Psat1g076480 Pisum sativum HOM05D006434 ORTHO05D008069 1.6e-56 224.2 210 54.3
PGR142G2438 Punica granatum HOM05D006434 ORTHO05D008069 1.6e-56 224.2 209 55.0
QL02p079411 Quercus lobata HOM05D006434 ORTHO05D008069 1.6e-56 224.2 209 54.5
Solyc02g067540.3 Solanum lycopersicum HOM05D006434 ORTHO05D008069 1.6e-56 224.2 207 55.1
Sopen02g016670 Solanum pennellii HOM05D006434 ORTHO05D008069 1.6e-56 224.2 207 55.1
PGSC0003DMG400006900 Solanum tuberosum HOM05D006434 ORTHO05D008069 1.6e-56 224.2 207 55.1
ATR0665G567 Amborella trichopoda HOM05D006434 ORTHO05D008069 2.1e-56 223.8 208 54.8
Cc07_g02850 Coffea canephora HOM05D006434 ORTHO05D008069 2.8e-56 223.4 208 55.8
Medtr6g009400 Medicago truncatula HOM05D006434 ORTHO05D008069 2.8e-56 223.4 210 53.8
GSVIVG01032566001 Vitis vinifera HOM05D006434 ORTHO05D008069 2.8e-56 223.4 209 55.0
Nn1g08819 Nelumbo nucifera HOM05D006434 ORTHO05D008069 3.6e-56 223.0 210 54.3
Actinidia06053 Actinidia chinensis HOM05D006434 ORTHO05D008069 6.2e-56 222.2 208 54.8
CSS0040499 Camellia sinensis var. sinensis HOM05D006434 ORTHO05D008069 6.2e-56 222.2 218 53.2
Dinv35002 Davidia involucrata HOM05D006434 ORTHO05D008069 8.1e-56 221.9 210 54.8
TAR629G3263 Trochodendron aralioides HOM05D006434 ORTHO05D008069 8.1e-56 221.9 210 53.3
HanXRQChr15g0488521 Helianthus annuus HOM05D006434 ORTHO05D008069 1.4e-55 221.1 208 53.4
CANSAT64G2331 Cannabis sativa HOM05D006434 ORTHO05D008069 1.8e-55 220.7 210 53.3
Eucgr.I01896 Eucalyptus grandis HOM05D006434 ORTHO05D008069 3.1e-55 219.9 210 52.9
MD09G1042700 Malus domestica HOM05D006434 ORTHO05D008069 1.5e-54 217.6 208 52.4
Oeu022866.3 Olea europaea HOM05D006434 ORTHO05D008069 2.0e-54 217.2 202 55.4
Rhsim10G0029400 Rhododendron simsii HOM05D006434 ORTHO05D008069 2.6e-54 216.9 209 55.0
SGA_v2.0_scaffold205G41750 Striga asiatica HOM05D006434 ORTHO05D008069 3.4e-54 216.5 209 52.6
RcHm_v2.0_Chr2g0169691 Rosa chinensis HOM05D006434 ORTHO05D008069 4.4e-54 216.1 210 52.9
MSTRG.23964 Avicennia marina HOM05D006434 ORTHO05D008069 7.5e-54 215.3 208 53.8
HPP92_023566 Vanilla planifolia HOM05D006434 ORTHO05D008069 7.5e-54 215.3 205 54.1
FvH4_6g49670 Fragaria vesca HOM05D006434 ORTHO05D008069 1.7e-53 214.2 210 52.4
FAN02G4063 Fragaria x ananassa HOM05D006434 ORTHO05D008069 1.7e-53 214.2 210 52.4
FAN14G5872 Fragaria x ananassa HOM05D006434 ORTHO05D008069 1.7e-53 214.2 210 52.4
Migut.H00876 Erythranthe guttata HOM05D006434 ORTHO05D008069 4.9e-53 212.6 210 51.9
CBR_g31858 Chara braunii HOM05D006434 ORTHO05D008069 8.3e-53 211.8 308 43.2
FAN05G1688 Fragaria x ananassa HOM05D006434 ORTHO05D008069 1.9e-52 210.7 210 51.4
arahy.Tifrunner.gnm1.ann1.ICRE53 Arachis hypogaea HOM05D006434 ORTHO05D008069 2.4e-52 210.3 208 52.4
arahy.Tifrunner.gnm1.ann1.X2C98S Arachis hypogaea HOM05D006434 ORTHO05D008069 2.4e-52 210.3 208 52.4
Lsat_1_v5_gn_4_180280 Lactuca sativa HOM05D006434 ORTHO05D008069 2.4e-52 210.3 220 50.0
Glyma.19G017500 Glycine max HOM05D006434 ORTHO05D008069 9.2e-52 208.4 199 53.8
CDE02G1577 Ceratophyllum demersum HOM05D006434 ORTHO05D008069 1.2e-51 208.0 206 51.9
EL10Ac2g02902 Beta vulgaris HOM05D006434 ORTHO05D008069 3.5e-51 206.5 233 51.1
CSS0001127 Camellia sinensis var. sinensis HOM05D006434 ORTHO05D008069 8.6e-50 201.8 213 50.7
CiPaw.03G032300 Carya illinoinensis HOM05D006434 ORTHO05D008069 1.2e-48 198.0 191 55.0
Zm00001eb215320 Zea mays HOM05D006434 ORTHO05D008069 2.1e-48 197.2 208 52.9
Cre13.g566300 Chlamydomonas reinhardtii HOM05D006434 ORTHO05D008069 8.1e-48 195.3 202 46.5
CSS0033350 Camellia sinensis var. sinensis HOM05D006434 ORTHO05D008069 1.8e-47 194.1 211 49.8
Ca_04243_v3 Cicer arietinum L. HOM05D006434 ORTHO05D008069 6.8e-47 192.2 224 46.0
ClCG09G018520 Citrullus lanatus HOM05D006434 ORTHO05D008069 6.8e-47 192.2 188 54.8
AT3G28460 Arabidopsis thaliana HOM05D006434 ORTHO05D008069 4.4e-46 189.5 171 58.5
Haze_14607 Corylus avellana HOM05D006434 ORTHO05D008069 8.4e-45 185.3 189 52.9
FAN09G0258 Fragaria x ananassa HOM05D006434 ORTHO05D008069 8.4e-45 185.3 273 41.4
Nitab4.5_0003431g0070 Nicotiana tabacum HOM05D006434 ORTHO05D008069 1.4e-44 184.5 181 53.0
SalBow1G5247 Salvia bowleyana HOM05D006434 ORTHO05D008069 1.4e-44 184.5 176 53.4
Cpa.g.sc14.62 Carica papaya HOM05D006434 ORTHO05D008069 1.2e-43 181.4 181 53.0
PRCOL_00006620 Prasinoderma coloniale HOM05D006434 ORTHO05D008069 3.9e-42 176.4 209 43.5
Prupe.3G275100 Prunus persica HOM05D006434 ORTHO05D008069 1.4e-39 167.9 167 52.7
CSS0043817 Camellia sinensis var. sinensis HOM05D006434 ORTHO05D008069 1.8e-39 167.5 185 48.6
SEGI_25544 Sequoiadendron giganteum HOM05D006434 ORTHO05D008069 7.3e-33 145.6 131 52.7
Hund13291 Selenicereus undatus HOM05D006434 ORTHO05D008069 4.8e-32 142.9 135 57.0
MBI01_g13068_MAGBIO Magnolia biondii HOM05D006434 ORTHO05D008069 2.4e-31 140.6 121 59.5
Lj7A404T37 Lonicera japonica HOM05D006434 ORTHO05D008069 3.1e-31 140.2 123 58.5
SEGI_38692 Sequoiadendron giganteum HOM05D006434 ORTHO05D008069 7.6e-30 135.6 124 51.6
MCO03G139 Micromonas commoda HOM05D006434 ORTHO05D008069 1.8e-26 124.4 121 50.4
MBI01_g13070_MAGBIO Magnolia biondii HOM05D006434 ORTHO05D008069 6.0e-19 99.4 78 53.8
Sopen01g021310 Solanum pennellii HOM05D006434 ORTHO05D008069 1.5e-17 94.7 87 58.6
Solyc01g057060.1 Solanum lycopersicum HOM05D006434 ORTHO05D008069 1.4e-15 88.2 91 51.6
MD17G1044100 Malus domestica HOM05D006434 ORTHO05D008069 6.0e-11 72.8 58 63.8
TAR371G0222 Trochodendron aralioides HOM05D006434 ORTHO05D008069 3.3e-09 67.0 68 52.9


User provided reference genes

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