Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0137s0028 Marchantia polymorpha HOM05D006634 ORTHO05D008282 4.6e-48 194.1 92 100.0
Pp3c7_7440 Physcomitrium patens HOM05D006634 ORTHO05D008282 2.2e-18 95.5 91 48.4
CDE06G1545 Ceratophyllum demersum HOM05D006634 ORTHO05D008282 1.1e-12 76.6 92 44.6
Os10g0481400 Oryza sativa ssp. japonica HOM05D006634 ORTHO05D008282 1.4e-12 76.3 92 44.6
GSVIVG01025186001 Vitis vinifera HOM05D006634 ORTHO05D008282 4.1e-12 74.7 92 45.7
Aqoxy2G01632 Aquilegia oxysepala HOM05D006634 ORTHO05D008282 5.4e-12 74.3 89 42.7
Lalb_Chr19g0137281 Lupinus albus HOM05D006634 ORTHO05D008282 5.4e-12 74.3 92 44.6
MD03G1117700 Malus domestica HOM05D006634 ORTHO05D008282 5.4e-12 74.3 92 44.6
Sed0017465 Sechium edule HOM05D006634 ORTHO05D008282 5.4e-12 74.3 95 44.2
Zm00001eb221580 Zea mays HOM05D006634 ORTHO05D008282 9.2e-12 73.6 92 43.5
AagrBONN_evm.TU.Sc2ySwM_362.2948 Anthoceros agrestis HOM05D006634 ORTHO05D008282 1.2e-11 73.2 63 54.0
Zm00001eb045570 Zea mays HOM05D006634 ORTHO05D008282 1.6e-11 72.8 92 42.4
CDE07G0066 Ceratophyllum demersum HOM05D006634 ORTHO05D008282 5.9e-11 70.9 90 44.4
Phvul.011G079100 Phaseolus vulgaris HOM05D006634 ORTHO05D008282 5.9e-11 70.9 92 40.2
MELO3C020691.2 Cucumis melo HOM05D006634 ORTHO05D008282 7.8e-11 70.5 93 43.0
TWI79G0418 Tripterygium wilfordii HOM05D006634 ORTHO05D008282 1.0e-10 70.1 93 40.9
Glyma.11G146700 Glycine max HOM05D006634 ORTHO05D008282 1.3e-10 69.7 92 40.2
Psat7g225160 Pisum sativum HOM05D006634 ORTHO05D008282 1.3e-10 69.7 92 39.1
PGR102G2188 Punica granatum HOM05D006634 ORTHO05D008282 1.7e-10 69.3 92 41.3
Ciclev10029701m.g Citrus clementina HOM05D006634 ORTHO05D008282 2.9e-10 68.6 92 40.2
CsaV3_1G033740 Cucumis sativus L. HOM05D006634 ORTHO05D008282 2.9e-10 68.6 93 41.9
Glyma.12G067600 Glycine max HOM05D006634 ORTHO05D008282 2.9e-10 68.6 91 39.6
arahy.Tifrunner.gnm1.ann1.8AEA4E Arachis hypogaea HOM05D006634 ORTHO05D008282 3.8e-10 68.2 94 42.6
arahy.Tifrunner.gnm1.ann1.RYN47D Arachis hypogaea HOM05D006634 ORTHO05D008282 3.8e-10 68.2 92 41.3
CiPaw.13G113000 Carya illinoinensis HOM05D006634 ORTHO05D008282 3.8e-10 68.2 93 41.9
Medtr4g459450 Medicago truncatula HOM05D006634 ORTHO05D008282 5.0e-10 67.8 92 39.1
ClCG03G001830 Citrullus lanatus HOM05D006634 ORTHO05D008282 6.6e-10 67.4 93 43.0
Lj3g0007397 Lotus japonicus HOM05D006634 ORTHO05D008282 6.6e-10 67.4 92 42.4
MD11G1136000 Malus domestica HOM05D006634 ORTHO05D008282 6.6e-10 67.4 92 41.3
TPR.G15540 Trifolium pratense HOM05D006634 ORTHO05D008282 6.6e-10 67.4 92 38.0
SalBow3G1265 Salvia bowleyana HOM05D006634 ORTHO05D008282 1.1e-09 66.6 92 40.2
unitig_21.g20301 Utricularia gibba HOM05D006634 ORTHO05D008282 1.1e-09 66.6 92 38.0
Dinv32744 Davidia involucrata HOM05D006634 ORTHO05D008282 1.9e-09 65.9 93 39.8
Hma1.2p1_0058F.1_g032540 Hydrangea macrophylla HOM05D006634 ORTHO05D008282 2.5e-09 65.5 92 38.0
Sabra04G0142400 Salix brachista HOM05D006634 ORTHO05D008282 2.5e-09 65.5 89 41.6
CSS0041274 Camellia sinensis var. sinensis HOM05D006634 ORTHO05D008282 3.3e-09 65.1 93 38.7
CANSAT54G0497 Cannabis sativa HOM05D006634 ORTHO05D008282 4.3e-09 64.7 93 39.8
CANSAT54G1359 Cannabis sativa HOM05D006634 ORTHO05D008282 4.3e-09 64.7 93 39.8
CANSAT54G1657 Cannabis sativa HOM05D006634 ORTHO05D008282 4.3e-09 64.7 93 39.8
CANSAT54G2640 Cannabis sativa HOM05D006634 ORTHO05D008282 4.3e-09 64.7 93 39.8
CANSAT54G2841 Cannabis sativa HOM05D006634 ORTHO05D008282 4.3e-09 64.7 93 39.8
HanXRQChr02g0031651 Helianthus annuus HOM05D006634 ORTHO05D008282 4.3e-09 64.7 92 43.5
Nn2g10789 Nelumbo nucifera HOM05D006634 ORTHO05D008282 4.3e-09 64.7 93 39.8
Atru.chr3.3630 Acer truncatum HOM05D006634 ORTHO05D008282 7.3e-09 63.9 94 39.4
Potri.004G210800 Populus trichocarpa HOM05D006634 ORTHO05D008282 7.3e-09 63.9 87 42.5
CBR_g51663 Chara braunii HOM05D006634 ORTHO05D008282 1.6e-08 62.8 94 35.1
Actinidia03728 Actinidia chinensis HOM05D006634 ORTHO05D008282 2.1e-08 62.4 91 41.8
CANSAT54G0287 Cannabis sativa HOM05D006634 ORTHO05D008282 2.1e-08 62.4 96 37.5
CANSAT54G1094 Cannabis sativa HOM05D006634 ORTHO05D008282 2.1e-08 62.4 96 37.5
Eucgr.B02497 Eucalyptus grandis HOM05D006634 ORTHO05D008282 2.1e-08 62.4 92 39.1
CANSAT54G1506 Cannabis sativa HOM05D006634 ORTHO05D008282 2.8e-08 62.0 93 39.8
Prupe.6G101400 Prunus persica HOM05D006634 ORTHO05D008282 2.8e-08 62.0 93 39.8
Rhsim01G0216700 Rhododendron simsii HOM05D006634 ORTHO05D008282 2.8e-08 62.0 92 41.3
Oeu002870.2 Olea europaea HOM05D006634 ORTHO05D008282 3.6e-08 61.6 86 39.5
vmacro14436 Vaccinium macrocarpon HOM05D006634 ORTHO05D008282 4.7e-08 61.2 92 42.4
THA.LOC104800608 Tarenaya hassleriana HOM05D006634 ORTHO05D008282 6.1e-08 60.8 92 38.0
Gohir.A05G103000 Gossypium hirsutum HOM05D006634 ORTHO05D008282 2.3e-07 58.9 92 38.0
Solyc11g069410.2 Solanum lycopersicum HOM05D006634 ORTHO05D008282 2.3e-07 58.9 93 38.7
Sopen11g028130 Solanum pennellii HOM05D006634 ORTHO05D008282 2.3e-07 58.9 93 38.7
THA.LOC104826362 Tarenaya hassleriana HOM05D006634 ORTHO05D008282 3.0e-07 58.5 89 40.4
A07p19000 Brassica napus HOM05D006634 ORTHO05D008282 4.0e-07 58.2 92 40.2
Gohir.A08G197800 Gossypium hirsutum HOM05D006634 ORTHO05D008282 4.0e-07 58.2 92 39.1
BraA07t29605Z Brassica rapa HOM05D006634 ORTHO05D008282 5.2e-07 57.8 92 40.2
Gorai.009G107000 Gossypium raimondii HOM05D006634 ORTHO05D008282 5.2e-07 57.8 92 38.0
AUR62039638 Chenopodium quinoa HOM05D006634 ORTHO05D008282 6.8e-07 57.4 92 37.0
DCAR_018812 Daucus carota HOM05D006634 ORTHO05D008282 6.8e-07 57.4 85 36.5
C04p22950 Brassica napus HOM05D006634 ORTHO05D008282 8.9e-07 57.0 92 41.3
Manes.11G145100 Manihot esculenta HOM05D006634 ORTHO05D008282 8.9e-07 57.0 89 38.2
AT2G28430 Arabidopsis thaliana HOM05D006634 ORTHO05D008282 1.2e-06 56.6 92 38.0
BolC4t23789H Brassica oleracea HOM05D006634 ORTHO05D008282 1.2e-06 56.6 92 40.2
Duzib168G0710 Durio zibethinus HOM05D006634 ORTHO05D008282 1.5e-06 56.2 92 38.0
Gorai.004G228800 Gossypium raimondii HOM05D006634 ORTHO05D008282 1.5e-06 56.2 92 38.0
HanXRQChr14g0452861 Helianthus annuus HOM05D006634 ORTHO05D008282 1.5e-06 56.2 89 38.2
AL4G21590 Arabidopsis lyrata HOM05D006634 ORTHO05D008282 2.0e-06 55.8 92 39.1
CSS0031934 Camellia sinensis var. sinensis HOM05D006634 ORTHO05D008282 2.0e-06 55.8 93 37.6
Nitab4.5_0000650g0190 Nicotiana tabacum HOM05D006634 ORTHO05D008282 2.6e-06 55.5 93 37.6
Aa31LG5G7790 Aethionema arabicum HOM05D006634 ORTHO05D008282 3.4e-06 55.1 93 38.7
Carub.0004s0938 Capsella rubella HOM05D006634 ORTHO05D008282 3.4e-06 55.1 92 38.0
Gohir.D05G102700 Gossypium hirsutum HOM05D006634 ORTHO05D008282 3.4e-06 55.1 92 37.0
Actinidia25419 Actinidia chinensis HOM05D006634 ORTHO05D008282 4.4e-06 54.7 72 43.1
BcaNung07072 Brassica carinata HOM05D006634 ORTHO05D008282 5.7e-06 54.3 92 39.1
CARHR121380 Cardamine hirsuta HOM05D006634 ORTHO05D008282 5.7e-06 54.3 92 38.0
Manes.04G021400 Manihot esculenta HOM05D006634 ORTHO05D008282 7.5e-06 53.9 89 37.1
Sp4g11250 Schrenkiella parvula HOM05D006634 ORTHO05D008282 9.8e-06 53.5 92 38.0


User provided reference genes

Program Settings