Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0137s0011 Marchantia polymorpha HOM05D014402 ORTHO05D016488 0.0e+00 1667.5 892 100.0
AagrBONN_evm.TU.Sc2ySwM_117.1010 Anthoceros agrestis HOM05D014402 ORTHO05D016488 1.8e-40 172.2 928 25.2
SMO351G0572 Selaginella moellendorffii HOM05D014402 ORTHO05D016488 5.7e-18 97.4 331 24.2
Mapoly0040s0022 Marchantia polymorpha HOM05D014402 ORTHO05D016488 6.3e-17 94.0 72 58.3
Mapoly0040s0007 Marchantia polymorpha HOM05D014402 ORTHO05D016488 2.4e-16 92.0 68 55.9
SEGI_33412 Sequoiadendron giganteum HOM05D014402 ORTHO05D016488 3.1e-16 91.7 678 21.2
ATR0693G399 Amborella trichopoda HOM05D014402 ORTHO05D016488 5.9e-15 87.4 262 25.6
Mapoly0172s0020 Marchantia polymorpha HOM05D014402 ORTHO05D016488 3.1e-11 75.1 70 50.0
Mapoly0056s0026 Marchantia polymorpha HOM05D014402 ORTHO05D016488 4.4e-10 71.2 76 40.8
Aa31LG1G19210 Aethionema arabicum HOM05D003253 ORTHO05D002078 2.9e-09 68.6 134 29.9
PSO761G0482 Papaver somniferum HOM05D003253 ORTHO05D002078 2.9e-09 68.6 133 28.6
Solyc09g061370.1 Solanum lycopersicum HOM05D003253 ORTHO05D002078 1.1e-08 66.6 84 39.3
AagrBONN_evm.TU.Sc2ySwM_344.1597 Anthoceros agrestis HOM05D003253 ORTHO05D002078 1.4e-08 66.2 132 31.8
CBR_g39596 Chara braunii HOM05D014402 ORTHO05D016488 1.9e-08 65.9 42 61.9
Solyc06g054200.3 Solanum lycopersicum HOM05D003253 ORTHO05D002078 1.9e-08 65.9 90 37.8
Solyc06g054180.1 Solanum lycopersicum HOM05D003253 ORTHO05D002078 2.4e-08 65.5 90 36.7
Pp3c15_9060 Physcomitrium patens HOM05D003253 ORTHO05D002078 9.2e-08 63.5 155 26.5
Pp3c9_22000 Physcomitrium patens HOM05D003253 ORTHO05D002078 1.2e-07 63.2 97 34.0
Pp3c9_22005 Physcomitrium patens HOM05D003253 ORTHO05D002078 1.2e-07 63.2 97 34.0
Psat4g210160 Pisum sativum HOM05D003253 ORTHO05D002078 1.6e-07 62.8 83 37.3
MSTRG.24737 Avicennia marina HOM05D003253 ORTHO05D002078 2.0e-07 62.4 133 30.1
CSS0030672 Camellia sinensis var. sinensis HOM05D003253 ORTHO05D002078 3.5e-07 61.6 127 28.3
CSS0040917 Camellia sinensis var. sinensis HOM05D003253 ORTHO05D002078 3.5e-07 61.6 127 28.3
Solyc06g054160.2 Solanum lycopersicum HOM05D003253 ORTHO05D002078 3.5e-07 61.6 90 35.6
Migut.N00190 Erythranthe guttata HOM05D003253 ORTHO05D002078 4.6e-07 61.2 92 35.9
Phvul.002G044800 Phaseolus vulgaris HOM05D003253 ORTHO05D002078 6.0e-07 60.8 133 31.6
Sopen06g019340 Solanum pennellii HOM05D003253 ORTHO05D002078 6.0e-07 60.8 90 35.6
CBR_g48542 Chara braunii HOM05D003253 ORTHO05D002078 7.8e-07 60.5 181 26.0
PGR004G2032 Punica granatum HOM05D003253 ORTHO05D002078 7.8e-07 60.5 146 28.1
SalBow3G1993 Salvia bowleyana HOM05D003253 ORTHO05D002078 7.8e-07 60.5 83 36.1
PGSC0003DMG400006740 Solanum tuberosum HOM05D003253 ORTHO05D002078 1.0e-06 60.1 90 35.6
SGA_v2.0_scaffold522G52706 Striga asiatica HOM05D003253 ORTHO05D002078 1.0e-06 60.1 89 33.7
arahy.Tifrunner.gnm1.ann1.2A778E Arachis hypogaea HOM05D003253 ORTHO05D002078 2.3e-06 58.9 83 34.9
CAN.G1094.7 Capsicum annuum HOM05D003253 ORTHO05D002078 3.9e-06 58.2 112 33.0
arahy.Tifrunner.gnm1.ann1.ETQ115 Arachis hypogaea HOM05D003253 ORTHO05D002078 5.0e-06 57.8 83 33.7
CAN.G231.2 Capsicum annuum HOM05D003253 ORTHO05D002078 5.0e-06 57.8 90 33.3
DCAR_002383 Daucus carota HOM05D003253 ORTHO05D002078 5.0e-06 57.8 84 36.9
PGSC0003DMG400029502 Solanum tuberosum HOM05D000222 ORTHO05D004962 8.6e-06 57.0 152 25.0


User provided reference genes

Program Settings