Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0136s0020 Marchantia polymorpha HOM05D006031 ORTHO05D007417 2.2e-114 415.6 207 100.0
Ca_25548_v3 Cicer arietinum L. HOM05D006031 ORTHO05D007417 3.3e-86 322.0 203 71.9
TPR.G34905 Trifolium pratense HOM05D006031 ORTHO05D007417 5.7e-86 321.2 203 72.4
RcHm_v2.0_Chr2g0091271 Rosa chinensis HOM05D006031 ORTHO05D007417 1.3e-85 320.1 203 72.4
Glyma.01G145300 Glycine max HOM05D006031 ORTHO05D007417 1.7e-85 319.7 203 70.9
Actinidia20400 Actinidia chinensis HOM05D006031 ORTHO05D007417 6.3e-85 317.8 203 72.4
PGR102G2811 Punica granatum HOM05D006031 ORTHO05D007417 6.3e-85 317.8 203 73.4
Pp3c6_12910 Physcomitrium patens HOM05D006031 ORTHO05D007417 1.1e-84 317.0 206 73.8
CsaV3_2G002120 Cucumis sativus L. HOM05D006031 ORTHO05D007417 1.8e-84 316.2 203 72.4
FAN23G2797 Fragaria x ananassa HOM05D006031 ORTHO05D007417 1.8e-84 316.2 203 71.9
Atru.chr7.1388 Acer truncatum HOM05D006031 ORTHO05D007417 2.4e-84 315.8 203 72.9
Medtr1g035260 Medicago truncatula HOM05D006031 ORTHO05D007417 3.1e-84 315.5 203 70.4
VMungo0464G0135 Vigna mungo HOM05D006031 ORTHO05D007417 3.1e-84 315.5 203 70.0
GSVIVG01015348001 Vitis vinifera HOM05D006031 ORTHO05D007417 3.1e-84 315.5 203 71.9
arahy.Tifrunner.gnm1.ann1.4UU729 Arachis hypogaea HOM05D006031 ORTHO05D007417 4.1e-84 315.1 203 71.9
Sabra18G0072100 Salix brachista HOM05D006031 ORTHO05D007417 5.3e-84 314.7 203 71.4
Sp7g26830 Schrenkiella parvula HOM05D006031 ORTHO05D007417 5.3e-84 314.7 203 73.4
Phvul.004G168000 Phaseolus vulgaris HOM05D006031 ORTHO05D007417 6.9e-84 314.3 203 69.5
QL02p044744 Quercus lobata HOM05D006031 ORTHO05D007417 6.9e-84 314.3 203 70.9
Aa31LG2G21560 Aethionema arabicum HOM05D006031 ORTHO05D007417 9.1e-84 313.9 203 72.4
arahy.Tifrunner.gnm1.ann1.P4D2XC Arachis hypogaea HOM05D006031 ORTHO05D007417 9.1e-84 313.9 203 71.4
MELO3C004569.2 Cucumis melo HOM05D006031 ORTHO05D007417 9.1e-84 313.9 203 71.9
ECA234G3380 Erigeron canadensis HOM05D006031 ORTHO05D007417 9.1e-84 313.9 202 71.8
Lsat_1_v5_gn_4_6541 Lactuca sativa HOM05D006031 ORTHO05D007417 9.1e-84 313.9 203 70.9
Lalb_Chr22g0352651 Lupinus albus HOM05D006031 ORTHO05D007417 9.1e-84 313.9 203 70.4
FvH4_1g05640 Fragaria vesca HOM05D006031 ORTHO05D007417 1.2e-83 313.5 203 71.4
FAN26G0948 Fragaria x ananassa HOM05D006031 ORTHO05D007417 1.2e-83 313.5 203 70.9
FAN26G3395 Fragaria x ananassa HOM05D006031 ORTHO05D007417 1.2e-83 313.5 203 70.9
AagrBONN_evm.TU.Sc2ySwM_228.3645 Anthoceros agrestis HOM05D006031 ORTHO05D007417 1.5e-83 313.2 204 71.6
C07p56460 Brassica napus HOM05D006031 ORTHO05D007417 1.5e-83 313.2 203 73.4
BolC7t46125H Brassica oleracea HOM05D006031 ORTHO05D007417 1.5e-83 313.2 203 73.4
BcaC09g51657 Brassica carinata HOM05D006031 ORTHO05D007417 2.6e-83 312.4 203 72.9
BolC1t01025H Brassica oleracea HOM05D006031 ORTHO05D007417 2.6e-83 312.4 203 72.9
A03p58440 Brassica napus HOM05D006031 ORTHO05D007417 3.4e-83 312.0 203 72.9
AL7G23660 Arabidopsis lyrata HOM05D006031 ORTHO05D007417 4.5e-83 311.6 203 72.9
HanXRQChr17g0570151 Helianthus annuus HOM05D006031 ORTHO05D007417 4.5e-83 311.6 203 70.4
Potri.018G083800 Populus trichocarpa HOM05D006031 ORTHO05D007417 5.9e-83 311.2 203 70.9
BraA01t00856Z Brassica rapa HOM05D006031 ORTHO05D007417 7.7e-83 310.8 203 72.4
BraA03t14904Z Brassica rapa HOM05D006031 ORTHO05D007417 7.7e-83 310.8 203 72.4
AUR62021455 Chenopodium quinoa HOM05D006031 ORTHO05D007417 7.7e-83 310.8 203 72.4
Cc06_g10050 Coffea canephora HOM05D006031 ORTHO05D007417 7.7e-83 310.8 203 71.9
Dinv41637 Davidia involucrata HOM05D006031 ORTHO05D007417 7.7e-83 310.8 203 70.9
AT4G28830 Arabidopsis thaliana HOM05D006031 ORTHO05D007417 1.0e-82 310.5 203 72.4
BcaNung01361 Brassica carinata HOM05D006031 ORTHO05D007417 1.0e-82 310.5 203 72.9
Carub.0007s1181 Capsella rubella HOM05D006031 ORTHO05D007417 1.0e-82 310.5 203 72.4
Eucgr.C03802 Eucalyptus grandis HOM05D006031 ORTHO05D007417 1.0e-82 310.5 203 70.9
CANSAT56G1289 Cannabis sativa HOM05D006031 ORTHO05D007417 1.3e-82 310.1 203 70.9
Thhalv10026253m.g Eutrema salsugineum HOM05D006031 ORTHO05D007417 1.3e-82 310.1 203 72.9
TWI63G0954 Tripterygium wilfordii HOM05D006031 ORTHO05D007417 1.3e-82 310.1 203 70.9
C01p10630 Brassica napus HOM05D006031 ORTHO05D007417 1.7e-82 309.7 203 72.4
COL.COLO4_34809 Corchorus olitorius HOM05D006031 ORTHO05D007417 1.7e-82 309.7 203 71.4
MD02G1057400 Malus domestica HOM05D006031 ORTHO05D007417 1.7e-82 309.7 203 70.9
Nitab4.5_0000952g0030 Nicotiana tabacum HOM05D006031 ORTHO05D007417 1.7e-82 309.7 202 71.8
MBI04_g14932_MAGBIO Magnolia biondii HOM05D006031 ORTHO05D007417 3.8e-82 308.5 203 70.4
Hund26230 Selenicereus undatus HOM05D006031 ORTHO05D007417 3.8e-82 308.5 203 71.4
A01p09080 Brassica napus HOM05D006031 ORTHO05D007417 5.0e-82 308.1 203 71.9
Manes.03G024000 Manihot esculenta HOM05D006031 ORTHO05D007417 5.0e-82 308.1 203 70.9
Nitab4.5_0000010g0020 Nicotiana tabacum HOM05D006031 ORTHO05D007417 5.0e-82 308.1 202 71.3
BcaC06g32602 Brassica carinata HOM05D006031 ORTHO05D007417 6.5e-82 307.8 203 71.4
CiPaw.03G228000 Carya illinoinensis HOM05D006031 ORTHO05D007417 6.5e-82 307.8 203 68.5
Solyc12g006030.2 Solanum lycopersicum HOM05D006031 ORTHO05D007417 6.5e-82 307.8 203 70.9
Migut.K00493 Erythranthe guttata HOM05D006031 ORTHO05D007417 8.5e-82 307.4 203 70.4
Sopen12g002000 Solanum pennellii HOM05D006031 ORTHO05D007417 1.1e-81 307.0 203 70.4
CAN.G478.5 Capsicum annuum HOM05D006031 ORTHO05D007417 1.4e-81 306.6 203 70.0
ATR0315G117 Amborella trichopoda HOM05D006031 ORTHO05D007417 2.5e-81 305.8 203 70.4
ClCG11G002340 Citrullus lanatus HOM05D006031 ORTHO05D007417 2.5e-81 305.8 224 65.2
Cpa.g.sc12.30 Carica papaya HOM05D006031 ORTHO05D007417 3.2e-81 305.4 203 71.4
Hma1.2p1_0945F.1_g240050 Hydrangea macrophylla HOM05D006031 ORTHO05D007417 3.2e-81 305.4 203 69.5
Ciclev10009448m.g Citrus clementina HOM05D006031 ORTHO05D007417 4.2e-81 305.1 206 70.4
Gohir.D06G063200 Gossypium hirsutum HOM05D006031 ORTHO05D007417 5.5e-81 304.7 203 70.0
Gorai.010G073700 Gossypium raimondii HOM05D006031 ORTHO05D007417 5.5e-81 304.7 203 70.0
THA.LOC104804018 Tarenaya hassleriana HOM05D006031 ORTHO05D007417 5.5e-81 304.7 203 70.9
Thecc.09G105700 Theobroma cacao HOM05D006031 ORTHO05D007417 7.2e-81 304.3 203 70.4
Nn2g11655 Nelumbo nucifera HOM05D006031 ORTHO05D007417 9.4e-81 303.9 203 69.5
EL10Ac8g18430 Beta vulgaris HOM05D006031 ORTHO05D007417 1.2e-80 303.5 203 70.0
Peaxi162Scf00539g00717 Petunia axillaris HOM05D006031 ORTHO05D007417 2.1e-80 302.8 203 70.9
Gohir.A06G064600 Gossypium hirsutum HOM05D006031 ORTHO05D007417 2.7e-80 302.4 203 69.5
PSO566G0179 Papaver somniferum HOM05D006031 ORTHO05D007417 4.7e-80 301.6 203 70.0
PSO782G0755 Papaver somniferum HOM05D006031 ORTHO05D007417 4.7e-80 301.6 203 70.0
Aqoxy7G01527 Aquilegia oxysepala HOM05D006031 ORTHO05D007417 6.1e-80 301.2 203 68.5
SalBow3G0984 Salvia bowleyana HOM05D006031 ORTHO05D007417 5.1e-79 298.1 208 68.8
AUR62010942 Chenopodium quinoa HOM05D006031 ORTHO05D007417 6.7e-79 297.7 203 70.4
CDE02G2180 Ceratophyllum demersum HOM05D006031 ORTHO05D007417 1.1e-78 297.0 213 66.7
Sc18g0001360 Simmondsia chinensis HOM05D006031 ORTHO05D007417 1.1e-78 297.0 203 66.5
TAR624G0502 Trochodendron aralioides HOM05D006031 ORTHO05D007417 1.5e-78 296.6 203 67.0
Actinidia09434 Actinidia chinensis HOM05D006031 ORTHO05D007417 2.6e-78 295.8 206 68.0
Zm00001eb271370 Zea mays HOM05D006031 ORTHO05D007417 2.6e-78 295.8 203 68.0
Os06g0162600 Oryza sativa ssp. japonica HOM05D006031 ORTHO05D007417 1.7e-77 293.1 203 67.0
SGA_v2.0_scaffold387G50523 Striga asiatica HOM05D006031 ORTHO05D007417 4.8e-77 291.6 206 67.0
CSS0004856 Camellia sinensis var. sinensis HOM05D006031 ORTHO05D007417 4.1e-76 288.5 204 65.7
SMO164G0018 Selaginella moellendorffii HOM05D006031 ORTHO05D007417 6.9e-76 287.7 205 68.3
SMO304G0145 Selaginella moellendorffii HOM05D006031 ORTHO05D007417 2.0e-75 286.2 205 68.3
HPP92_005270 Vanilla planifolia HOM05D006031 ORTHO05D007417 1.0e-74 283.9 208 65.4
unitig_62.g23476 Utricularia gibba HOM05D006031 ORTHO05D007417 2.9e-74 282.3 215 65.1
vmacro10877 Vaccinium macrocarpon HOM05D006031 ORTHO05D007417 2.1e-72 276.2 203 64.0
Ah.09g230920 Amaranthus hybridus HOM05D006031 ORTHO05D007417 4.7e-72 275.0 184 67.9
CARHR236620 Cardamine hirsuta HOM05D006031 ORTHO05D007417 9.7e-70 267.3 203 65.0
Duzib150G0325 Durio zibethinus HOM05D006031 ORTHO05D007417 2.4e-68 262.7 203 63.5
Prupe.7G225500 Prunus persica HOM05D006031 ORTHO05D007417 4.5e-67 258.5 178 67.4
ClCG06G015420 Citrullus lanatus HOM05D006031 ORTHO05D007417 1.0e-66 257.3 167 71.3
Cfa003225 Carpinus fangiana HOM05D006031 ORTHO05D007417 1.3e-66 256.9 203 61.6
Lj2g0026722 Lotus japonicus HOM05D006031 ORTHO05D007417 9.7e-62 240.7 157 69.4
Hma1.2p1_0945F.1_g240060 Hydrangea macrophylla HOM05D006031 ORTHO05D007417 2.8e-61 239.2 164 67.1
Haze_25783 Corylus avellana HOM05D006031 ORTHO05D007417 1.1e-60 237.3 184 61.4
Dinv41633 Davidia involucrata HOM05D006031 ORTHO05D007417 1.4e-60 236.9 164 66.5
Psat1g044640 Pisum sativum HOM05D006031 ORTHO05D007417 2.4e-60 236.1 157 68.8
Rhsim05G0043800 Rhododendron simsii HOM05D006031 ORTHO05D000070 1.6e-59 233.4 247 49.8
MSTRG.26365 Avicennia marina HOM05D006031 ORTHO05D007417 5.5e-57 224.9 157 68.2
Cre08.g384700 Chlamydomonas reinhardtii HOM05D006031 ORTHO05D007417 2.1e-56 223.0 213 52.1
PGSC0003DMG400013889 Solanum tuberosum HOM05D000011 ORTHO05D007417 9.8e-54 214.2 187 57.2
CBR_g49195 Chara braunii HOM05D005459 ORTHO05D006751 3.7e-53 212.2 182 59.3
Sed0012983 Sechium edule HOM05D006031 ORTHO05D007417 1.2e-48 197.2 131 70.2
PRCOL_00003743 Prasinoderma coloniale HOM05D006031 ORTHO05D007417 2.1e-48 196.4 208 49.5
MCO05G480 Micromonas commoda HOM05D006031 ORTHO05D007417 4.1e-44 182.2 208 49.5
arahy.Tifrunner.gnm1.ann1.PEIA6U Arachis hypogaea HOM05D006031 ORTHO05D007417 2.7e-43 179.5 151 60.3
DCAR_012059 Daucus carota HOM05D006031 ORTHO05D007417 7.3e-41 171.4 141 60.3
Zm00001eb271350 Zea mays HOM05D006031 ORTHO05D007417 2.1e-40 169.9 121 65.3
Zm00001eb442390 Zea mays HOM05D006031 ORTHO05D007417 2.1e-40 169.9 121 65.3
Haze_26211 Corylus avellana HOM05D006031 ORTHO05D007417 5.0e-34 148.7 223 39.0
Haze_27462 Corylus avellana HOM05D006031 ORTHO05D007417 5.0e-34 148.7 223 39.0
Lj4A429T15 Lonicera japonica HOM05D006031 ORTHO05D007417 1.9e-33 146.7 95 70.5
PRCOL_00005480 Prasinoderma coloniale HOM05D006031 ORTHO05D007417 1.1e-23 114.4 194 38.7
BcaC09g51665 Brassica carinata HOM05D006031 ORTHO05D007417 1.6e-19 100.5 84 59.5
Lsat_1_v5_gn_8_38160 Lactuca sativa HOM05D006031 ORTHO05D007417 7.8e-19 98.2 96 51.0
SEGI_07643 Sequoiadendron giganteum HOM05D006031 ORTHO05D007417 7.8e-19 98.2 65 69.2
AUR62033208 Chenopodium quinoa HOM05D003603 ORTHO05D004186 9.5e-17 91.3 52 78.8
AUR62044225 Chenopodium quinoa HOM05D003603 ORTHO05D004186 1.2e-16 90.9 51 80.4
Zm00001eb271390 Zea mays HOM05D006031 ORTHO05D007417 6.8e-15 85.1 53 73.6
SEGI_21752 Sequoiadendron giganteum HOM05D006031 ORTHO05D007417 5.8e-14 82.0 57 64.9
Glyma.09G193200 Glycine max HOM05D006031 ORTHO05D007417 1.4e-12 77.4 72 52.8
VMungo0464G0776 Vigna mungo HOM05D000002 ORTHO05D000001 4.6e-11 72.4 44 72.7
Medtr6g087210 Medicago truncatula HOM05D006031 ORTHO05D007417 1.6e-08 63.9 50 56.0
Lj4C429T0 Lonicera japonica HOM05D002180 ORTHO05D001339 4.7e-08 62.4 38 73.7
MBI06_g04307_MAGBIO Magnolia biondii HOM05D006031 ORTHO05D007417 1.4e-07 60.8 134 35.1
Thhalv10002738m.g Eutrema salsugineum HOM05D006031 ORTHO05D007417 6.9e-07 58.5 39 64.1
COL.COLO4_34793 Corchorus olitorius HOM05D006031 ORTHO05D007417 9.9e-06 54.7 32 78.1


User provided reference genes

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