Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0135s0043 Marchantia polymorpha HOM05D010830 ORTHO05D013093 2.6e-95 352.1 179 100.0
Mapoly0333s0001 Marchantia polymorpha HOM05D010830 ORTHO05D013093 5.3e-80 301.2 178 86.5
Mapoly0135s0046 Marchantia polymorpha HOM05D010830 ORTHO05D013093 1.6e-73 279.6 158 87.3
Mapoly0059s0072 Marchantia polymorpha HOM05D010830 ORTHO05D013093 3.1e-56 222.2 178 64.0
Mapoly0135s0042 Marchantia polymorpha HOM05D010830 ORTHO05D013093 1.1e-53 213.8 177 60.5
Mapoly0047s0058 Marchantia polymorpha HOM05D010830 ORTHO05D013093 1.6e-52 209.9 177 60.5
Mapoly0047s0060 Marchantia polymorpha HOM05D010830 ORTHO05D013093 1.6e-52 209.9 177 60.5
Mapoly0059s0071 Marchantia polymorpha HOM05D010830 ORTHO05D013093 1.0e-51 207.2 178 60.1
Mapoly0053s0049 Marchantia polymorpha HOM05D010830 ORTHO05D013093 2.5e-50 202.6 177 58.8
Mapoly0016s0002 Marchantia polymorpha HOM05D010830 ORTHO05D013093 4.5e-47 191.8 179 59.2
Mapoly0016s0001 Marchantia polymorpha HOM05D010830 ORTHO05D013093 1.0e-46 190.7 179 58.7
Mapoly0152s0002 Marchantia polymorpha HOM05D010830 ORTHO05D013093 1.0e-46 190.7 179 58.7
Mapoly0060s0115 Marchantia polymorpha HOM05D010830 ORTHO05D013093 1.2e-44 183.7 177 57.1
Mapoly0047s0059 Marchantia polymorpha HOM05D010830 ORTHO05D013093 1.4e-43 180.3 147 60.5
Mapoly0152s0003 Marchantia polymorpha HOM05D010830 ORTHO05D013093 3.1e-40 169.1 147 59.9
Mapoly0024s0020 Marchantia polymorpha HOM05D010830 ORTHO05D013093 5.0e-30 135.2 171 43.9
Mapoly0047s0061 Marchantia polymorpha HOM05D010830 ORTHO05D013093 7.2e-29 131.3 123 55.3
Mapoly0072s0041 Marchantia polymorpha HOM05D010830 ORTHO05D013093 2.2e-14 83.2 153 35.9
Mapoly0121s0040 Marchantia polymorpha HOM05D010830 ORTHO05D013093 1.6e-12 77.0 162 34.0
Mapoly0154s0011 Marchantia polymorpha HOM05D029457 ORTHO05D048774 5.7e-10 68.6 132 39.4
Gorai.008G200500 Gossypium raimondii HOM05D000180 ORTHO05D000099 7.5e-10 68.2 152 34.9
Gohir.A12G184300 Gossypium hirsutum HOM05D000180 ORTHO05D000099 2.8e-09 66.2 152 32.2
Potri.001G214600 Populus trichocarpa HOM05D000180 ORTHO05D000099 4.9e-09 65.5 168 32.7
Thecc.03G108200 Theobroma cacao HOM05D000180 ORTHO05D000099 4.9e-09 65.5 167 30.5
TWI60G0860 Tripterygium wilfordii HOM05D000180 ORTHO05D000099 4.9e-09 65.5 163 31.3
TWI60G1496 Tripterygium wilfordii HOM05D000180 ORTHO05D000099 4.9e-09 65.5 163 31.3
CiPaw.15G114000 Carya illinoinensis HOM05D000180 ORTHO05D000099 6.3e-09 65.1 165 30.9
QL08p032297 Quercus lobata HOM05D000180 ORTHO05D000099 8.3e-09 64.7 133 32.3
SMO304G0105 Selaginella moellendorffii HOM05D000180 ORTHO05D000099 1.4e-08 63.9 158 28.5
Zm00001eb067090 Zea mays HOM05D000180 ORTHO05D000099 1.4e-08 63.9 142 33.8
Mapoly0006s0217 Marchantia polymorpha HOM05D014630 ORTHO05D000099 1.8e-08 63.5 152 31.6
Cpa.g.sc3.234 Carica papaya HOM05D000180 ORTHO05D000099 2.4e-08 63.2 165 30.3
Lsat_1_v5_gn_6_36240 Lactuca sativa HOM05D000180 ORTHO05D000099 4.1e-08 62.4 129 32.6
Manes.13G098600 Manihot esculenta HOM05D000180 ORTHO05D000099 4.1e-08 62.4 169 29.6
FvH4_2g01660 Fragaria vesca HOM05D000180 ORTHO05D000099 5.4e-08 62.0 150 29.3
FAN24G1913 Fragaria x ananassa HOM05D000180 ORTHO05D000099 5.4e-08 62.0 150 29.3
Atru.chr4.1594 Acer truncatum HOM05D000180 ORTHO05D000099 7.0e-08 61.6 172 29.7
Aqoxy3G03747 Aquilegia oxysepala HOM05D000180 ORTHO05D000099 9.1e-08 61.2 164 31.1
FAN06G0338 Fragaria x ananassa HOM05D000180 ORTHO05D000099 9.1e-08 61.2 142 32.4
FAN06G1956 Fragaria x ananassa HOM05D000180 ORTHO05D000099 9.1e-08 61.2 142 32.4
Pp3c13_12170 Physcomitrium patens HOM05D000180 ORTHO05D000099 9.1e-08 61.2 137 27.7
Duzib068G0783 Durio zibethinus HOM05D000180 ORTHO05D000099 1.6e-07 60.5 172 30.8
ECA247G1349 Erigeron canadensis HOM05D000180 ORTHO05D000099 1.6e-07 60.5 157 31.8
FvH4_7g31480 Fragaria vesca HOM05D000180 ORTHO05D000099 1.6e-07 60.5 160 31.9
FAN15G3463 Fragaria x ananassa HOM05D000180 ORTHO05D000099 1.6e-07 60.5 150 28.7
Hma1.2p1_0595F.1_g186270 Hydrangea macrophylla HOM05D000180 ORTHO05D000099 1.6e-07 60.5 176 29.0
SMO331G0078 Selaginella moellendorffii HOM05D000180 ORTHO05D000099 1.6e-07 60.5 120 33.3
FvH4_6g42490 Fragaria vesca HOM05D000180 ORTHO05D000099 2.0e-07 60.1 132 33.3
FAN14G0740 Fragaria x ananassa HOM05D000180 ORTHO05D000099 2.0e-07 60.1 132 33.3
CSS0019864 Camellia sinensis var. sinensis HOM05D000180 ORTHO05D000099 2.7e-07 59.7 169 28.4
PGR004G0710 Punica granatum HOM05D000180 ORTHO05D000099 2.7e-07 59.7 157 30.6
arahy.Tifrunner.gnm1.ann1.FTV255 Arachis hypogaea HOM05D000180 ORTHO05D000099 3.5e-07 59.3 162 30.2
Carub.0004s0013 Capsella rubella HOM05D000180 ORTHO05D000099 3.5e-07 59.3 136 33.8
SEGI_34023 Sequoiadendron giganteum HOM05D000180 ORTHO05D000099 3.5e-07 59.3 133 32.3
AL4G10190 Arabidopsis lyrata HOM05D000180 ORTHO05D000099 4.5e-07 58.9 136 33.8
SMO356G0033 Selaginella moellendorffii HOM05D000180 ORTHO05D000099 4.5e-07 58.9 120 35.8
AT2G21100 Arabidopsis thaliana HOM05D000180 ORTHO05D000099 5.9e-07 58.5 136 33.8
COL.COLO4_27494 Corchorus olitorius HOM05D000180 ORTHO05D009692 5.9e-07 58.5 144 33.3
MBI09_g25279_MAGBIO Magnolia biondii HOM05D000180 ORTHO05D000099 5.9e-07 58.5 142 29.6
Medtr3g105640 Medicago truncatula HOM05D000180 ORTHO05D000099 5.9e-07 58.5 151 31.1
MD14G1216400 Malus domestica HOM05D000180 ORTHO05D000099 7.7e-07 58.2 166 28.9
Sp4g00240 Schrenkiella parvula HOM05D000180 ORTHO05D000099 7.7e-07 58.2 136 33.8
vmacro17640 Vaccinium macrocarpon HOM05D000180 ORTHO05D000099 7.7e-07 58.2 169 29.0
CSS0024616 Camellia sinensis var. sinensis HOM05D000180 ORTHO05D000099 1.0e-06 57.8 166 30.7
Dinv07974 Davidia involucrata HOM05D004085 ORTHO05D005189 1.0e-06 57.8 154 29.2
Hma1.2p1_0595F.1_g186280 Hydrangea macrophylla HOM05D000180 ORTHO05D000099 1.0e-06 57.8 171 28.1
MBI13_g16301_MAGBIO Magnolia biondii HOM05D000180 ORTHO05D000099 1.0e-06 57.8 155 31.0
PGR004G1159 Punica granatum HOM05D000180 ORTHO05D000099 1.0e-06 57.8 123 33.3
Zm00001eb026860 Zea mays HOM05D000180 ORTHO05D000099 1.0e-06 57.8 149 30.9
A09p58530 Brassica napus HOM05D000180 ORTHO05D000099 1.3e-06 57.4 136 33.1
BraA09t41240Z Brassica rapa HOM05D000180 ORTHO05D000003 1.3e-06 57.4 136 33.1
CDE07G1183 Ceratophyllum demersum HOM05D000180 ORTHO05D000099 1.3e-06 57.4 124 31.5
FAN05G0464 Fragaria x ananassa HOM05D000180 ORTHO05D000099 1.7e-06 57.0 131 32.8
Lsat_1_v5_gn_1_15201 Lactuca sativa HOM05D000180 ORTHO05D000099 1.7e-06 57.0 160 28.8
Mapoly0117s0015 Marchantia polymorpha HOM05D014630 ORTHO05D019289 1.7e-06 57.0 149 28.9
vmacro23210 Vaccinium macrocarpon HOM05D000180 ORTHO05D000099 1.7e-06 57.0 131 31.3
HanXRQChr15g0476701 Helianthus annuus HOM05D000180 ORTHO05D000099 2.3e-06 56.6 128 30.5
Lsat_1_v5_gn_6_36221 Lactuca sativa HOM05D000180 ORTHO05D000099 2.3e-06 56.6 128 30.5
SEGI_17706 Sequoiadendron giganteum HOM05D000180 ORTHO05D000099 2.3e-06 56.6 165 29.7
BcaB08g34961 Brassica carinata HOM05D000180 ORTHO05D000099 2.9e-06 56.2 136 33.1
CARHR111940 Cardamine hirsuta HOM05D000180 ORTHO05D000099 2.9e-06 56.2 135 31.1
Lj1P768T21 Lonicera japonica HOM05D000180 ORTHO05D000099 2.9e-06 56.2 127 33.1
Manes.06G081000 Manihot esculenta HOM05D000180 ORTHO05D000099 2.9e-06 56.2 164 32.3
Pp3c6_6560 Physcomitrium patens HOM05D021719 ORTHO05D000099 2.9e-06 56.2 128 32.8
Pp3c6_6610 Physcomitrium patens HOM05D021719 ORTHO05D000099 2.9e-06 56.2 128 32.8
VMungo0331G1833 Vigna mungo HOM05D000180 ORTHO05D000099 2.9e-06 56.2 128 29.7
FAN14G4538 Fragaria x ananassa HOM05D000180 ORTHO05D000099 3.8e-06 55.8 131 32.1
Mapoly0117s0018 Marchantia polymorpha HOM05D014630 ORTHO05D019289 3.8e-06 55.8 148 31.1
Prupe.3G215200 Prunus persica HOM05D000180 ORTHO05D000099 3.8e-06 55.8 153 32.0
RcHm_v2.0_Chr2g0158911 Rosa chinensis HOM05D000180 ORTHO05D000099 3.8e-06 55.8 143 33.6
BcaC07g41175 Brassica carinata HOM05D000180 ORTHO05D000099 5.0e-06 55.5 136 32.4
C08p41830 Brassica napus HOM05D000180 ORTHO05D000099 5.0e-06 55.5 136 32.4
Dinv05410 Davidia involucrata HOM05D000180 ORTHO05D000099 5.0e-06 55.5 150 33.3
Dinv05412 Davidia involucrata HOM05D000180 ORTHO05D000099 5.0e-06 55.5 150 34.0
Lsat_1_v5_gn_1_60060 Lactuca sativa HOM05D000180 ORTHO05D000099 5.0e-06 55.5 134 31.3
Lj8C126T7 Lonicera japonica HOM05D000180 ORTHO05D000099 5.0e-06 55.5 178 28.7
TWI53G1771 Tripterygium wilfordii HOM05D000180 ORTHO05D000099 5.0e-06 55.5 161 29.8
GSVIVG01030448001 Vitis vinifera HOM05D000180 ORTHO05D000099 5.0e-06 55.5 172 25.6
Ah.13g075610 Amaranthus hybridus HOM05D000180 ORTHO05D000099 6.6e-06 55.1 127 29.9
COL.COLO4_30591 Corchorus olitorius HOM05D000180 ORTHO05D000099 6.6e-06 55.1 174 29.9
Prupe.3G215500 Prunus persica HOM05D000180 ORTHO05D000099 6.6e-06 55.1 153 30.7
TWI79G1603 Tripterygium wilfordii HOM05D000180 ORTHO05D000099 6.6e-06 55.1 134 32.1
Aqoxy2G00295 Aquilegia oxysepala HOM05D000180 ORTHO05D000099 8.6e-06 54.7 128 31.2
ECA233G0609 Erigeron canadensis HOM05D000180 ORTHO05D000099 8.6e-06 54.7 128 30.5
Mapoly0117s0017 Marchantia polymorpha HOM05D014630 ORTHO05D019289 8.6e-06 54.7 142 28.2
Mapoly0154s0009 Marchantia polymorpha HOM05D030815 ORTHO05D255570 8.6e-06 54.7 163 30.1
SMO367G0602 Selaginella moellendorffii HOM05D000180 ORTHO05D000099 8.6e-06 54.7 165 26.1


User provided reference genes

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