Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0135s0042 Marchantia polymorpha HOM05D010830 ORTHO05D013093 3.0e-96 355.1 175 100.0
Mapoly0333s0001 Marchantia polymorpha HOM05D010830 ORTHO05D013093 1.6e-57 226.5 180 62.2
Mapoly0047s0058 Marchantia polymorpha HOM05D010830 ORTHO05D013093 9.8e-55 217.2 173 61.8
Mapoly0047s0060 Marchantia polymorpha HOM05D010830 ORTHO05D013093 9.8e-55 217.2 173 61.8
Mapoly0135s0043 Marchantia polymorpha HOM05D010830 ORTHO05D013093 6.3e-54 214.5 177 60.5
Mapoly0135s0046 Marchantia polymorpha HOM05D010830 ORTHO05D013093 9.1e-53 210.7 155 63.9
Mapoly0059s0072 Marchantia polymorpha HOM05D010830 ORTHO05D013093 3.8e-51 205.3 180 60.0
Mapoly0016s0002 Marchantia polymorpha HOM05D010830 ORTHO05D013093 4.2e-50 201.8 181 59.1
Mapoly0016s0001 Marchantia polymorpha HOM05D010830 ORTHO05D013093 6.1e-49 198.0 179 58.7
Mapoly0047s0059 Marchantia polymorpha HOM05D010830 ORTHO05D013093 6.1e-49 198.0 150 62.0
Mapoly0053s0049 Marchantia polymorpha HOM05D010830 ORTHO05D013093 6.1e-49 198.0 180 57.8
Mapoly0152s0002 Marchantia polymorpha HOM05D010830 ORTHO05D013093 6.1e-49 198.0 179 58.7
Mapoly0152s0003 Marchantia polymorpha HOM05D010830 ORTHO05D013093 1.8e-45 186.4 149 61.7
Mapoly0059s0071 Marchantia polymorpha HOM05D010830 ORTHO05D013093 4.1e-45 185.3 178 55.6
Mapoly0060s0115 Marchantia polymorpha HOM05D010830 ORTHO05D013093 6.6e-43 177.9 179 53.6
Mapoly0024s0020 Marchantia polymorpha HOM05D010830 ORTHO05D013093 1.2e-31 140.6 169 45.0
Mapoly0047s0061 Marchantia polymorpha HOM05D010830 ORTHO05D013093 9.8e-31 137.5 116 58.6
Mapoly0072s0041 Marchantia polymorpha HOM05D010830 ORTHO05D013093 9.5e-18 94.4 166 34.9
Mapoly0121s0040 Marchantia polymorpha HOM05D010830 ORTHO05D013093 4.6e-12 75.5 166 32.5
Medtr4g122130 Medicago truncatula HOM05D000180 ORTHO05D000099 5.1e-11 72.0 170 31.2
SMO331G0078 Selaginella moellendorffii HOM05D000180 ORTHO05D000099 6.6e-11 71.6 124 32.3
SMO304G0105 Selaginella moellendorffii HOM05D000180 ORTHO05D000099 3.3e-10 69.3 148 31.8
FvH4_7g31480 Fragaria vesca HOM05D000180 ORTHO05D000099 5.6e-10 68.6 164 34.8
SMO147G0293 Selaginella moellendorffii HOM05D000180 ORTHO05D000099 2.1e-09 66.6 124 33.1
FvH4_6g42490 Fragaria vesca HOM05D000180 ORTHO05D000099 8.1e-09 64.7 152 31.6
VMungo1215G2518 Vigna mungo HOM05D000180 ORTHO05D000099 8.1e-09 64.7 148 31.8
Cc03_g00830 Coffea canephora HOM05D000180 ORTHO05D000099 1.1e-08 64.3 160 31.2
FAN06G0338 Fragaria x ananassa HOM05D000180 ORTHO05D000099 1.1e-08 64.3 140 35.0
FAN06G1956 Fragaria x ananassa HOM05D000180 ORTHO05D000099 1.1e-08 64.3 140 35.0
FAN14G5554 Fragaria x ananassa HOM05D000180 ORTHO05D000099 4.0e-08 62.4 115 33.9
Pp3c5_22560 Physcomitrium patens HOM05D021719 ORTHO05D000099 4.0e-08 62.4 176 30.7
FAN14G0740 Fragaria x ananassa HOM05D000180 ORTHO05D000099 5.2e-08 62.0 126 34.1
PGR004G0710 Punica granatum HOM05D000180 ORTHO05D000099 6.8e-08 61.6 160 31.9
Phvul.003G114200 Phaseolus vulgaris HOM05D000180 ORTHO05D000099 1.5e-07 60.5 140 31.4
Pp3c13_12170 Physcomitrium patens HOM05D000180 ORTHO05D000099 1.5e-07 60.5 119 33.6
SMO347G0300 Selaginella moellendorffii HOM05D000180 ORTHO05D000099 1.5e-07 60.5 122 31.1
FvH4_6g42510 Fragaria vesca HOM05D000180 ORTHO05D000099 2.0e-07 60.1 115 33.0
Mapoly0117s0017 Marchantia polymorpha HOM05D014630 ORTHO05D019289 2.0e-07 60.1 164 28.0
Ah.13g075610 Amaranthus hybridus HOM05D000180 ORTHO05D000099 3.4e-07 59.3 143 28.0
AUR62015322 Chenopodium quinoa HOM05D000180 ORTHO05D000099 3.4e-07 59.3 118 36.4
FAN09G0337 Fragaria x ananassa HOM05D000180 ORTHO05D000099 3.4e-07 59.3 146 32.2
TPR.G13355 Trifolium pratense HOM05D000180 ORTHO05D000099 4.4e-07 58.9 117 34.2
FAN10G1413 Fragaria x ananassa HOM05D000180 ORTHO05D000099 5.8e-07 58.5 140 33.6
FAN10G3022 Fragaria x ananassa HOM05D000180 ORTHO05D000099 5.8e-07 58.5 140 33.6
Nn3g17534 Nelumbo nucifera HOM05D000180 ORTHO05D000099 5.8e-07 58.5 171 30.4
Zm00001eb026860 Zea mays HOM05D000180 ORTHO05D000099 5.8e-07 58.5 154 31.2
Hma1.2p1_0595F.1_g186270 Hydrangea macrophylla HOM05D000180 ORTHO05D000099 7.6e-07 58.2 148 33.1
TAR629G2919 Trochodendron aralioides HOM05D000180 ORTHO05D000099 1.3e-06 57.4 168 30.4
EL10Ac3g06867 Beta vulgaris HOM05D000180 ORTHO05D000099 1.7e-06 57.0 135 31.9
FAN05G1781 Fragaria x ananassa HOM05D000180 ORTHO05D000099 1.7e-06 57.0 146 28.8
Mapoly0117s0015 Marchantia polymorpha HOM05D014630 ORTHO05D019289 1.7e-06 57.0 140 31.4
PGR004G2087 Punica granatum HOM05D000180 ORTHO05D000099 1.7e-06 57.0 148 31.1
TAR629G0736 Trochodendron aralioides HOM05D000180 ORTHO05D000099 1.7e-06 57.0 168 30.4
GSVIVG01033447001 Vitis vinifera HOM05D000180 ORTHO05D000099 2.2e-06 56.6 116 33.6
AagrBONN_evm.TU.Sc2ySwM_362.2480 Anthoceros agrestis HOM05D000180 ORTHO05D000099 2.9e-06 56.2 157 30.6
Mapoly0117s0018 Marchantia polymorpha HOM05D014630 ORTHO05D019289 2.9e-06 56.2 144 31.9
Pp3c6_6560 Physcomitrium patens HOM05D021719 ORTHO05D000099 2.9e-06 56.2 129 32.6
Pp3c6_6610 Physcomitrium patens HOM05D021719 ORTHO05D000099 2.9e-06 56.2 129 32.6
RcHm_v2.0_Chr2g0158911 Rosa chinensis HOM05D000180 ORTHO05D000099 2.9e-06 56.2 146 32.2
COL.COLO4_30591 Corchorus olitorius HOM05D000180 ORTHO05D000099 3.8e-06 55.8 171 28.7
FAN05G0464 Fragaria x ananassa HOM05D000180 ORTHO05D000099 3.8e-06 55.8 144 33.3
Duzib235G0259 Durio zibethinus HOM05D000180 ORTHO05D000099 4.9e-06 55.5 167 28.1
AagrBONN_evm.TU.Sc2ySwM_228.2903 Anthoceros agrestis HOM05D000180 ORTHO05D000099 8.4e-06 54.7 147 27.2
COL.COLO4_30585 Corchorus olitorius HOM05D000180 ORTHO05D000099 8.4e-06 54.7 147 31.3
Os11g0645400 Oryza sativa ssp. japonica HOM05D000180 ORTHO05D000099 8.4e-06 54.7 156 30.8
Zm00001eb067090 Zea mays HOM05D000180 ORTHO05D000099 8.4e-06 54.7 143 32.2


User provided reference genes

Program Settings