Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0135s0037 Marchantia polymorpha HOM05D007226 ORTHO05D009160 2.3e-114 415.6 216 100.0
Pp3c13_8590 Physcomitrium patens HOM05D007226 ORTHO05D009160 5.1e-37 158.7 152 55.3
AagrBONN_evm.TU.Sc2ySwM_369.234 Anthoceros agrestis HOM05D007226 ORTHO05D009160 2.1e-35 153.3 157 52.2
Ciclev10017084m.g Citrus clementina HOM05D007226 ORTHO05D009160 2.0e-33 146.7 148 52.0
Gohir.D06G145000 Gossypium hirsutum HOM05D007226 ORTHO05D009160 3.4e-33 146.0 104 62.5
Gorai.010G168700 Gossypium raimondii HOM05D007226 ORTHO05D009160 3.4e-33 146.0 104 62.5
Oeu056023.2 Olea europaea HOM05D007226 ORTHO05D009160 3.4e-33 146.0 113 55.8
Potri.015G121101 Populus trichocarpa HOM05D007226 ORTHO05D009160 3.4e-33 146.0 140 50.7
AT5G45040 Arabidopsis thaliana HOM05D007226 ORTHO05D009160 4.5e-33 145.6 112 58.9
PGR004G0179 Punica granatum HOM05D007226 ORTHO05D009160 7.6e-33 144.8 139 53.2
Thecc.06G141800 Theobroma cacao HOM05D007226 ORTHO05D009160 9.9e-33 144.4 104 59.6
AL8G14200 Arabidopsis lyrata HOM05D007226 ORTHO05D009160 1.3e-32 144.1 112 58.0
CARHR177680 Cardamine hirsuta HOM05D007226 ORTHO05D009160 1.3e-32 144.1 112 58.0
HanXRQChr14g0447221 Helianthus annuus HOM05D007226 ORTHO05D009160 1.3e-32 144.1 115 57.4
Peaxi162Scf00149g00723 Petunia axillaris HOM05D007226 ORTHO05D009160 1.3e-32 144.1 121 52.9
Sabra15G0137600 Salix brachista HOM05D007226 ORTHO05D009160 1.7e-32 143.7 122 54.9
AL8G14380 Arabidopsis lyrata HOM05D007226 ORTHO05D009160 2.2e-32 143.3 112 58.0
Sc15g0002750 Simmondsia chinensis HOM05D007226 ORTHO05D009160 2.9e-32 142.9 120 54.2
SGA_v2.0_scaffold175G39365 Striga asiatica HOM05D007226 ORTHO05D009160 3.8e-32 142.5 113 56.6
Actinidia22392 Actinidia chinensis HOM05D007226 ORTHO05D009160 4.9e-32 142.1 141 48.9
MD05G1252700 Malus domestica HOM05D007226 ORTHO05D009160 4.9e-32 142.1 131 53.4
Dinv05963 Davidia involucrata HOM05D007226 ORTHO05D009160 6.4e-32 141.7 106 58.5
Thhalv10001050m.g Eutrema salsugineum HOM05D007226 ORTHO05D009160 6.4e-32 141.7 112 57.1
Prupe.4G111200 Prunus persica HOM05D007226 ORTHO05D009160 6.4e-32 141.7 118 55.1
Sopen02g018030 Solanum pennellii HOM05D007226 ORTHO05D009160 8.4e-32 141.4 163 46.0
vmacro03514 Vaccinium macrocarpon HOM05D007226 ORTHO05D009160 8.4e-32 141.4 142 47.9
Nn7g38162 Nelumbo nucifera HOM05D007226 ORTHO05D009160 1.1e-31 141.0 115 56.5
SalBow6G7060 Salvia bowleyana HOM05D007226 ORTHO05D009160 1.1e-31 141.0 160 46.2
SalBow8G0530 Salvia bowleyana HOM05D007226 ORTHO05D009160 1.1e-31 141.0 160 46.2
PGSC0003DMG400010353 Solanum tuberosum HOM05D007226 ORTHO05D009160 1.1e-31 141.0 163 46.6
THA.LOC104812913 Tarenaya hassleriana HOM05D007226 ORTHO05D009160 1.1e-31 141.0 115 56.5
Manes.16G056825 Manihot esculenta HOM05D007226 ORTHO05D009160 1.4e-31 140.6 142 51.4
Rhsim02G0212700 Rhododendron simsii HOM05D007226 ORTHO05D009160 1.4e-31 140.6 128 53.1
Aqoxy1G01459 Aquilegia oxysepala HOM05D007226 ORTHO05D009160 1.9e-31 140.2 181 44.2
Migut.M01975 Erythranthe guttata HOM05D007226 ORTHO05D009160 1.9e-31 140.2 113 53.1
BcaC03g16718 Brassica carinata HOM05D007226 ORTHO05D009160 2.4e-31 139.8 112 56.2
C02p45740 Brassica napus HOM05D007226 ORTHO05D009160 2.4e-31 139.8 112 56.2
BolC2t10627H Brassica oleracea HOM05D007226 ORTHO05D009160 2.4e-31 139.8 112 56.2
CiPaw.09G078000 Carya illinoinensis HOM05D007226 ORTHO05D009160 2.4e-31 139.8 106 56.6
FvH4_3g12220 Fragaria vesca HOM05D007226 ORTHO05D009160 2.4e-31 139.8 141 50.4
TPR.G20974 Trifolium pratense HOM05D007226 ORTHO05D009160 2.4e-31 139.8 127 51.2
BolC2t10635H Brassica oleracea HOM05D007226 ORTHO05D009160 3.2e-31 139.4 112 55.4
ECA238G0615 Erigeron canadensis HOM05D007226 ORTHO05D009160 3.2e-31 139.4 113 55.8
COL.COLO4_30987 Corchorus olitorius HOM05D007226 ORTHO05D009160 4.2e-31 139.0 135 53.3
Duzib192G0307 Durio zibethinus HOM05D007226 ORTHO05D009160 4.2e-31 139.0 127 54.3
Solyc02g068930.4 Solanum lycopersicum HOM05D007226 ORTHO05D009160 4.2e-31 139.0 142 48.6
arahy.Tifrunner.gnm1.ann1.8FEK6M Arachis hypogaea HOM05D007226 ORTHO05D009160 5.4e-31 138.7 121 52.9
BcaB07g30483 Brassica carinata HOM05D007226 ORTHO05D009160 5.4e-31 138.7 112 55.4
ClCG01G025800 Citrullus lanatus HOM05D007226 ORTHO05D009160 5.4e-31 138.7 103 59.2
Cc09_g06180 Coffea canephora HOM05D007226 ORTHO05D009160 5.4e-31 138.7 182 44.0
MELO3C007008.2 Cucumis melo HOM05D007226 ORTHO05D009160 5.4e-31 138.7 103 59.2
Eucgr.E01876 Eucalyptus grandis HOM05D007226 ORTHO05D009160 5.4e-31 138.7 105 57.1
Gohir.A06G141000 Gossypium hirsutum HOM05D007226 ORTHO05D009160 5.4e-31 138.7 179 43.0
SEGI_36655 Sequoiadendron giganteum HOM05D007226 ORTHO05D009160 5.4e-31 138.7 138 51.4
Atru.chr10.515 Acer truncatum HOM05D007226 ORTHO05D009160 7.1e-31 138.3 133 52.6
CSS0023119 Camellia sinensis var. sinensis HOM05D007226 ORTHO05D009160 7.1e-31 138.3 144 47.9
Carub.0008s0327 Capsella rubella HOM05D007226 ORTHO05D009160 7.1e-31 138.3 112 56.2
CAN.G149.55 Capsicum annuum HOM05D007226 ORTHO05D009160 7.1e-31 138.3 166 44.6
TWI38G0719 Tripterygium wilfordii HOM05D007226 ORTHO05D009160 7.1e-31 138.3 136 50.7
Nitab4.5_0003773g0030 Nicotiana tabacum HOM05D007226 ORTHO05D009160 9.3e-31 137.9 206 40.3
BraA02t07911Z Brassica rapa HOM05D007226 ORTHO05D009160 1.6e-30 137.1 112 55.4
FAN25G1348 Fragaria x ananassa HOM05D007226 ORTHO05D009160 1.6e-30 137.1 170 44.1
GSVIVG01012076001 Vitis vinifera HOM05D007226 ORTHO05D009160 1.6e-30 137.1 140 49.3
CsaV3_6G053010 Cucumis sativus L. HOM05D007226 ORTHO05D009160 2.1e-30 136.7 117 53.8
Sed0015403 Sechium edule HOM05D007226 ORTHO05D009160 2.1e-30 136.7 102 59.8
FAN21G0149 Fragaria x ananassa HOM05D007226 ORTHO05D009160 2.7e-30 136.3 170 44.1
RcHm_v2.0_Chr5g0020011 Rosa chinensis HOM05D007226 ORTHO05D009160 2.7e-30 136.3 126 53.2
Cfa000717 Carpinus fangiana HOM05D007226 ORTHO05D009160 3.5e-30 136.0 107 54.2
Sp2g09820 Schrenkiella parvula HOM05D007226 ORTHO05D009160 3.5e-30 136.0 112 55.4
A02p28790 Brassica napus HOM05D007226 ORTHO05D009160 4.6e-30 135.6 112 55.4
QL11p017833 Quercus lobata HOM05D007226 ORTHO05D009160 6.0e-30 135.2 178 41.6
Lsat_1_v5_gn_2_62900 Lactuca sativa HOM05D007226 ORTHO05D009160 7.9e-30 134.8 154 46.1
VMungo0251G0617 Vigna mungo HOM05D007226 ORTHO05D009160 7.9e-30 134.8 118 51.7
TAR371G1071 Trochodendron aralioides HOM05D007226 ORTHO05D009160 1.0e-29 134.4 113 52.2
Cpa.g.sc135.15 Carica papaya HOM05D007226 ORTHO05D009160 1.8e-29 133.7 110 55.5
Ah.05g171090 Amaranthus hybridus HOM05D007226 ORTHO05D009160 3.0e-29 132.9 155 44.5
Medtr4g083990 Medicago truncatula HOM05D007226 ORTHO05D009160 3.9e-29 132.5 163 42.9
SMO356G0712 Selaginella moellendorffii HOM05D007226 ORTHO05D009160 3.9e-29 132.5 143 49.7
CDE06G2689 Ceratophyllum demersum HOM05D007226 ORTHO05D009160 5.1e-29 132.1 106 56.6
PSO675G1576 Papaver somniferum HOM05D007226 ORTHO05D009160 6.7e-29 131.7 106 53.8
DCAR_004326 Daucus carota HOM05D007226 ORTHO05D009160 1.1e-28 131.0 138 49.3
Phvul.002G098700 Phaseolus vulgaris HOM05D007226 ORTHO05D009160 1.5e-28 130.6 104 54.8
CDE02G1897 Ceratophyllum demersum HOM05D007226 ORTHO05D009160 3.3e-28 129.4 107 57.9
ATR0763G163 Amborella trichopoda HOM05D007226 ORTHO05D009160 7.4e-28 128.3 136 47.1
Lj4g0002757 Lotus japonicus HOM05D007226 ORTHO05D009160 7.4e-28 128.3 119 47.9
Ca_18766_v3 Cicer arietinum L. HOM05D007226 ORTHO05D009160 9.6e-28 127.9 140 45.0
Lalb_Chr05g0219731 Lupinus albus HOM05D007226 ORTHO05D009160 3.6e-27 125.9 193 38.9
arahy.Tifrunner.gnm1.ann1.X3ZR55 Arachis hypogaea HOM05D007226 ORTHO05D009160 6.2e-27 125.2 142 46.5
Glyma.07G221900 Glycine max HOM05D007226 ORTHO05D009160 6.2e-27 125.2 144 45.8
Nitab4.5_0001288g0030 Nicotiana tabacum HOM05D007226 ORTHO05D009160 1.1e-26 124.4 220 35.9
Haze_06036 Corylus avellana HOM05D007226 ORTHO05D009160 1.4e-26 124.0 177 39.0
Aa31LG9G8170 Aethionema arabicum HOM05D007226 ORTHO05D009160 2.6e-25 119.8 206 36.9
AUR62014337 Chenopodium quinoa HOM05D005358 ORTHO05D006384 7.6e-25 118.2 104 51.9
C02p45640 Brassica napus HOM05D007226 ORTHO05D009160 4.6e-22 109.0 89 55.1
MCO04G097 Micromonas commoda HOM05D007226 ORTHO05D009160 2.3e-21 106.7 145 43.4
HanXRQChr14g0447281 Helianthus annuus HOM05D007226 ORTHO05D009160 2.5e-20 103.2 126 43.7
Cre16.g670950 Chlamydomonas reinhardtii HOM05D007226 ORTHO05D009160 9.6e-20 101.3 183 33.3
Hma1.2p1_0040F.1_g025140 Hydrangea macrophylla HOM05D007226 ORTHO05D009160 2.8e-19 99.8 59 67.8
PRCOL_00005064 Prasinoderma coloniale HOM05D007226 ORTHO05D009160 4.5e-17 92.4 104 43.3
MBI19_g38421_MAGBIO Magnolia biondii HOM05D007226 ORTHO05D009160 1.9e-15 87.0 120 39.2
HPP92_015945 Vanilla planifolia HOM05D007226 ORTHO05D009160 2.1e-14 83.6 79 49.4
Glyma.20G020600 Glycine max HOM05D007226 ORTHO05D009160 3.5e-14 82.8 142 35.9
Lj2C351T11 Lonicera japonica HOM05D007226 ORTHO05D009160 7.4e-12 75.1 73 47.9
Psat7g130920 Pisum sativum HOM05D007226 ORTHO05D009160 8.2e-11 71.6 136 34.6
PSO541G5038 Papaver somniferum HOM05D007226 ORTHO05D009160 2.1e-06 57.0 57 42.1


User provided reference genes

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