Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0133s0055 Marchantia polymorpha HOM05D006780 ORTHO05D008455 9.2e-149 530.4 309 100.0
Pp3c8_4270 Physcomitrium patens HOM05D006780 ORTHO05D008455 6.5e-62 241.9 253 50.2
CDE02G2736 Ceratophyllum demersum HOM05D006780 ORTHO05D008455 2.8e-36 156.8 159 43.4
SMO301G0031 Selaginella moellendorffii HOM05D006780 ORTHO05D008455 2.3e-35 153.7 152 44.7
arahy.Tifrunner.gnm1.ann1.T2A0GP Arachis hypogaea HOM05D006780 ORTHO05D008455 1.7e-33 147.5 162 42.6
Glyma.12G002200 Glycine max HOM05D006780 ORTHO05D008455 1.7e-33 147.5 157 43.3
TPR.G31925 Trifolium pratense HOM05D006780 ORTHO05D008455 2.9e-33 146.7 164 43.3
Medtr4g033475 Medicago truncatula HOM05D006780 ORTHO05D008455 6.4e-33 145.6 153 45.1
Psat7g145160 Pisum sativum HOM05D006780 ORTHO05D008455 6.4e-33 145.6 164 43.3
TWI34G0276 Tripterygium wilfordii HOM05D006780 ORTHO05D008455 6.4e-33 145.6 151 45.0
arahy.Tifrunner.gnm1.ann1.T66758 Arachis hypogaea HOM05D006780 ORTHO05D008455 8.3e-33 145.2 162 42.0
VMungo1127G1066 Vigna mungo HOM05D006780 ORTHO05D008455 8.3e-33 145.2 165 39.4
Lj3g0022672 Lotus japonicus HOM05D006780 ORTHO05D008455 1.9e-32 144.1 164 40.2
MD01G1232400 Malus domestica HOM05D006780 ORTHO05D008455 4.1e-32 142.9 153 41.2
CDE11G0765 Ceratophyllum demersum HOM05D006780 ORTHO05D008455 5.4e-32 142.5 148 43.2
Thecc.05G208000 Theobroma cacao HOM05D006780 ORTHO05D008455 9.2e-32 141.7 162 38.3
ATR0829G223 Amborella trichopoda HOM05D006780 ORTHO05D008455 1.2e-31 141.4 160 40.0
Ca_19681_v3 Cicer arietinum L. HOM05D006780 ORTHO05D008455 1.2e-31 141.4 153 43.1
Gorai.004G260300 Gossypium raimondii HOM05D006780 ORTHO05D008455 1.2e-31 141.4 162 38.9
Hma1.2p1_0115F.1_g055870 Hydrangea macrophylla HOM05D006780 ORTHO05D008455 1.6e-31 141.0 149 43.0
Eucgr.K00108 Eucalyptus grandis HOM05D006780 ORTHO05D008455 2.7e-31 140.2 156 42.3
Nn6g33682 Nelumbo nucifera HOM05D006780 ORTHO05D008455 2.7e-31 140.2 161 38.5
GSVIVG01024468001 Vitis vinifera HOM05D006780 ORTHO05D008455 2.7e-31 140.2 161 39.1
Hund14300 Selenicereus undatus HOM05D006780 ORTHO05D008455 3.5e-31 139.8 162 39.5
Glyma.09G234600 Glycine max HOM05D006780 ORTHO05D008455 4.6e-31 139.4 161 39.1
Gohir.1Z049572 Gossypium hirsutum HOM05D006780 ORTHO05D008455 6.0e-31 139.0 162 38.3
Gohir.A08G223700 Gossypium hirsutum HOM05D006780 ORTHO05D008455 6.0e-31 139.0 162 37.7
Lj3A891T47 Lonicera japonica HOM05D006780 ORTHO05D008455 7.8e-31 138.7 153 40.5
TWI60G0503 Tripterygium wilfordii HOM05D006780 ORTHO05D008455 7.8e-31 138.7 150 44.0
Gohir.A05G389500 Gossypium hirsutum HOM05D006780 ORTHO05D008455 1.3e-30 137.9 162 39.5
Atru.chr12.2100 Acer truncatum HOM05D006780 ORTHO05D008455 2.3e-30 137.1 162 39.5
QL09p026712 Quercus lobata HOM05D006780 ORTHO05D008455 2.3e-30 137.1 152 40.8
TAR629G2389 Trochodendron aralioides HOM05D006780 ORTHO05D008455 2.3e-30 137.1 162 37.0
CiPaw.07G182200 Carya illinoinensis HOM05D006780 ORTHO05D008455 3.0e-30 136.7 151 43.0
Actinidia08727 Actinidia chinensis HOM05D006780 ORTHO05D008455 3.9e-30 136.3 163 38.7
CSS0033689 Camellia sinensis var. sinensis HOM05D006780 ORTHO05D008455 3.9e-30 136.3 153 41.8
ClCG01G004850 Citrullus lanatus HOM05D006780 ORTHO05D008455 3.9e-30 136.3 162 35.8
Actinidia34294 Actinidia chinensis HOM05D006780 ORTHO05D008455 5.0e-30 136.0 163 39.3
COL.COLO4_34143 Corchorus olitorius HOM05D006780 ORTHO05D008455 5.0e-30 136.0 162 37.7
Gorai.012G029700 Gossypium raimondii HOM05D006780 ORTHO05D008455 5.0e-30 136.0 162 37.7
MELO3C005448.2 Cucumis melo HOM05D006780 ORTHO05D008455 6.6e-30 135.6 162 35.8
CsaV3_5G005070 Cucumis sativus L. HOM05D006780 ORTHO05D008455 6.6e-30 135.6 162 35.8
Sed0025589 Sechium edule HOM05D006780 ORTHO05D008455 6.6e-30 135.6 162 37.7
Gohir.D04G027000 Gossypium hirsutum HOM05D006780 ORTHO05D008455 1.1e-29 134.8 162 38.3
Lsat_1_v5_gn_8_3841 Lactuca sativa HOM05D006780 ORTHO05D008455 1.1e-29 134.8 154 39.6
Phvul.011G002600 Phaseolus vulgaris HOM05D006780 ORTHO05D008455 1.1e-29 134.8 168 37.5
MD07G1304300 Malus domestica HOM05D006780 ORTHO05D008455 1.5e-29 134.4 151 40.4
Nitab4.5_0007683g0020 Nicotiana tabacum HOM05D006780 ORTHO05D008455 1.5e-29 134.4 152 40.1
CAN.G160.70 Capsicum annuum HOM05D006780 ORTHO05D008455 1.9e-29 134.0 156 37.8
Prupe.2G322900 Prunus persica HOM05D006780 ORTHO05D008455 1.9e-29 134.0 162 39.5
MSTRG.17 Avicennia marina HOM05D006780 ORTHO05D008455 2.5e-29 133.7 151 40.4
SalBow2G3389 Salvia bowleyana HOM05D006780 ORTHO05D008455 2.5e-29 133.7 164 37.8
Sopen07g001650 Solanum pennellii HOM05D006780 ORTHO05D008455 2.5e-29 133.7 163 38.0
Manes.09G119100 Manihot esculenta HOM05D006780 ORTHO05D008455 4.3e-29 132.9 164 36.6
CiPaw.08G043400 Carya illinoinensis HOM05D006780 ORTHO05D008455 7.3e-29 132.1 163 38.7
Nitab4.5_0000011g0110 Nicotiana tabacum HOM05D006780 ORTHO05D008455 7.3e-29 132.1 152 38.8
Solyc07g005550.4 Solanum lycopersicum HOM05D006780 ORTHO05D008455 7.3e-29 132.1 163 37.4
CDE02G3388 Ceratophyllum demersum HOM05D006780 ORTHO05D008455 9.5e-29 131.7 148 41.9
ECA233G5194 Erigeron canadensis HOM05D006780 ORTHO05D008455 9.5e-29 131.7 162 38.9
Ah.12g058490 Amaranthus hybridus HOM05D006780 ORTHO05D008455 1.2e-28 131.3 164 37.2
PGR142G1227 Punica granatum HOM05D006780 ORTHO05D008455 2.1e-28 130.6 164 34.1
Potri.004G030100 Populus trichocarpa HOM05D006780 ORTHO05D008455 2.8e-28 130.2 158 36.7
Ciclev10012613m.g Citrus clementina HOM05D006780 ORTHO05D008455 3.6e-28 129.8 162 35.8
FvH4_7g33420 Fragaria vesca HOM05D006780 ORTHO05D008455 3.6e-28 129.8 150 40.7
Dinv29183 Davidia involucrata HOM05D006780 ORTHO05D008455 4.7e-28 129.4 160 35.6
HanXRQChr08g0225871 Helianthus annuus HOM05D006780 ORTHO05D008455 4.7e-28 129.4 153 39.2
Cfa013613 Carpinus fangiana HOM05D006780 ORTHO05D008455 6.2e-28 129.0 151 40.4
FAN01G1241 Fragaria x ananassa HOM05D006780 ORTHO05D008455 6.2e-28 129.0 150 40.7
unitig_52.g16857 Utricularia gibba HOM05D006780 ORTHO05D008455 6.2e-28 129.0 161 36.0
FAN03G1919 Fragaria x ananassa HOM05D006780 ORTHO05D008455 8.1e-28 128.6 150 40.7
FAN10G0287 Fragaria x ananassa HOM05D006780 ORTHO05D008455 8.1e-28 128.6 150 40.7
FAN10G2247 Fragaria x ananassa HOM05D006780 ORTHO05D008455 8.1e-28 128.6 150 40.7
AT2G44870 Arabidopsis thaliana HOM05D006780 ORTHO05D008455 1.1e-27 128.3 171 36.3
AUR62010478 Chenopodium quinoa HOM05D006780 ORTHO05D008455 1.1e-27 128.3 162 37.0
Sabra04G0017100 Salix brachista HOM05D006780 ORTHO05D008455 1.1e-27 128.3 156 37.2
THA.LOC104805709 Tarenaya hassleriana HOM05D006780 ORTHO05D008455 1.4e-27 127.9 166 39.2
RcHm_v2.0_Chr1g0383391 Rosa chinensis HOM05D006780 ORTHO05D008455 1.8e-27 127.5 152 41.4
TAR636G2448 Trochodendron aralioides HOM05D006780 ORTHO05D008455 1.8e-27 127.5 151 38.4
AUR62030415 Chenopodium quinoa HOM05D006780 ORTHO05D008455 3.1e-27 126.7 162 35.8
Thhalv10022468m.g Eutrema salsugineum HOM05D006780 ORTHO05D008455 3.1e-27 126.7 171 34.5
Peaxi162Scf00542g00012 Petunia axillaris HOM05D006780 ORTHO05D008455 3.1e-27 126.7 169 36.7
Zm00001eb024190 Zea mays HOM05D006780 ORTHO05D008455 4.0e-27 126.3 159 35.8
Aa31LG2G2290 Aethionema arabicum HOM05D006780 ORTHO05D008455 5.2e-27 125.9 168 35.7
Hma1.2p1_0115F.1_g055860 Hydrangea macrophylla HOM05D006780 ORTHO05D008455 5.2e-27 125.9 136 44.1
CANSAT21G1469 Cannabis sativa HOM05D006780 ORTHO05D008455 1.5e-26 124.4 177 36.2
DCAR_008997 Daucus carota HOM05D006780 ORTHO05D008455 1.5e-26 124.4 161 37.3
Cc02_g00520 Coffea canephora HOM05D006780 ORTHO05D008455 2.0e-26 124.0 152 37.5
Migut.F00963 Erythranthe guttata HOM05D006780 ORTHO05D008455 2.0e-26 124.0 153 37.9
Sp5g19750 Schrenkiella parvula HOM05D006780 ORTHO05D008455 3.4e-26 123.2 170 34.7
Aqoxy3G02533 Aquilegia oxysepala HOM05D006780 ORTHO05D008455 4.4e-26 122.9 158 37.3
CBR_g642 Chara braunii HOM05D006780 ORTHO05D008455 4.4e-26 122.9 251 28.7
vmacro06481 Vaccinium macrocarpon HOM05D006780 ORTHO05D008455 7.5e-26 122.1 175 35.4
SGA_v2.0_scaffold165G38216 Striga asiatica HOM05D006780 ORTHO05D008455 1.3e-25 121.3 165 36.4
BcaC03g14678 Brassica carinata HOM05D006780 ORTHO05D008455 1.7e-25 120.9 141 41.8
A02p13050 Brassica napus HOM05D006780 ORTHO05D008455 1.7e-25 120.9 141 41.8
BolC2t08258H Brassica oleracea HOM05D006780 ORTHO05D008455 1.7e-25 120.9 141 41.8
BraA02t06361Z Brassica rapa HOM05D006780 ORTHO05D008455 1.7e-25 120.9 141 41.8
AL2G19830 Arabidopsis lyrata HOM05D006780 ORTHO05D008455 2.2e-25 120.6 140 42.1
C02p21190 Brassica napus HOM05D006780 ORTHO05D008455 4.9e-25 119.4 141 41.1
Carub.0002s1056 Capsella rubella HOM05D006780 ORTHO05D008455 1.4e-24 117.9 139 40.3
CDE11G0053 Ceratophyllum demersum HOM05D006780 ORTHO05D008455 1.4e-24 117.9 130 43.1
BcaB05g24083 Brassica carinata HOM05D006780 ORTHO05D008455 1.9e-24 117.5 142 38.7
Sc07g0007970 Simmondsia chinensis HOM05D006780 ORTHO05D008455 2.4e-24 117.1 148 35.8
CARHR056600 Cardamine hirsuta HOM05D006780 ORTHO05D008455 9.2e-24 115.2 138 41.3
Rhsim03G0219000 Rhododendron simsii HOM05D006780 ORTHO05D008455 2.7e-23 113.6 122 41.0
vmacro10178 Vaccinium macrocarpon HOM05D006780 ORTHO05D008455 3.5e-23 113.2 120 42.5
PSO063G3320 Papaver somniferum HOM05D006780 ORTHO05D008455 4.6e-23 112.8 135 39.3
PSO782G3414 Papaver somniferum HOM05D006780 ORTHO05D008455 6.0e-23 112.5 135 39.3
Rhsim09G0211500 Rhododendron simsii HOM05D006780 ORTHO05D008455 1.9e-21 107.5 207 30.4
Dinv17273 Davidia involucrata HOM05D006780 ORTHO05D008455 1.2e-20 104.8 114 38.6
PGSC0003DMG400011181 Solanum tuberosum HOM05D006780 ORTHO05D008455 2.1e-20 104.0 239 26.8
HPP92_025668 Vanilla planifolia HOM05D006780 ORTHO05D008455 8.4e-17 92.0 167 34.7
EL10Ac5g12581 Beta vulgaris HOM05D006780 ORTHO05D008455 2.4e-16 90.5 223 26.0
Duzib128G1164 Durio zibethinus HOM05D006780 ORTHO05D008455 6.6e-14 82.4 150 31.3
Duzib177G1050 Durio zibethinus HOM05D006780 ORTHO05D008455 2.5e-13 80.5 150 30.0
AagrBONN_evm.TU.Sc2ySwM_117.3057 Anthoceros agrestis HOM05D006780 ORTHO05D008455 1.3e-09 68.2 193 45.1


User provided reference genes

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