Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0133s0024 Marchantia polymorpha HOM05D006168 ORTHO05D007602 8.8e-65 250.4 148 100.0
AagrBONN_evm.TU.Sc2ySwM_368.389 Anthoceros agrestis HOM05D006168 ORTHO05D007602 1.6e-29 133.3 131 58.8
SMO147G0110 Selaginella moellendorffii HOM05D006168 ORTHO05D007602 4.7e-26 121.7 140 52.9
Ah.14g084700 Amaranthus hybridus HOM05D006168 ORTHO05D007602 1.1e-25 120.6 139 53.2
Pp3c19_22150 Physcomitrium patens HOM05D006168 ORTHO05D007602 1.1e-25 120.6 135 52.6
Prupe.5G244900 Prunus persica HOM05D006168 ORTHO05D007602 1.4e-25 120.2 133 51.1
Duzib114G0883 Durio zibethinus HOM05D006168 ORTHO05D007602 1.8e-25 119.8 134 51.5
COL.COLO4_12167 Corchorus olitorius HOM05D006168 ORTHO05D007602 3.1e-25 119.0 134 51.5
ECA238G2000 Erigeron canadensis HOM05D006168 ORTHO05D007602 3.1e-25 119.0 152 45.4
BolC3t16418H Brassica oleracea HOM05D006168 ORTHO05D007602 4.0e-25 118.6 133 52.6
RcHm_v2.0_Chr7g0176961 Rosa chinensis HOM05D006168 ORTHO05D007602 5.2e-25 118.2 141 48.2
BraA03t12572Z Brassica rapa HOM05D006168 ORTHO05D007602 6.8e-25 117.9 133 52.6
CiPaw.16G075600 Carya illinoinensis HOM05D006168 ORTHO05D007602 6.8e-25 117.9 136 53.7
GSVIVG01024249001 Vitis vinifera HOM05D006168 ORTHO05D007602 6.8e-25 117.9 133 49.6
Gorai.009G312100 Gossypium raimondii HOM05D006168 ORTHO05D007602 8.9e-25 117.5 133 51.1
Duzib128G1786 Durio zibethinus HOM05D006168 ORTHO05D007602 1.2e-24 117.1 134 50.0
Gohir.D05G295400 Gossypium hirsutum HOM05D006168 ORTHO05D007602 1.5e-24 116.7 134 50.7
Gohir.A05G294800 Gossypium hirsutum HOM05D006168 ORTHO05D007602 2.6e-24 115.9 134 50.0
Thecc.10G078900 Theobroma cacao HOM05D006168 ORTHO05D007602 2.6e-24 115.9 134 52.2
DCAR_011406 Daucus carota HOM05D006168 ORTHO05D007602 3.4e-24 115.5 127 50.4
Manes.02G226600 Manihot esculenta HOM05D006168 ORTHO05D007602 3.4e-24 115.5 133 50.4
Nn3g18550 Nelumbo nucifera HOM05D006168 ORTHO05D007602 3.4e-24 115.5 138 50.0
AUR62025335 Chenopodium quinoa HOM05D006168 ORTHO05D007602 4.4e-24 115.2 139 49.6
ECA238G0114 Erigeron canadensis HOM05D006168 ORTHO05D007602 4.4e-24 115.2 134 47.8
ECA238G1897 Erigeron canadensis HOM05D006168 ORTHO05D007602 4.4e-24 115.2 134 47.8
Sed0019180 Sechium edule HOM05D006168 ORTHO05D007602 4.4e-24 115.2 136 52.2
ATR0124G011 Amborella trichopoda HOM05D006168 ORTHO05D007602 5.8e-24 114.8 136 49.3
ECA238G2968 Erigeron canadensis HOM05D000092 ORTHO05D000042 7.5e-24 114.4 133 48.9
Aa31LG5G15370 Aethionema arabicum HOM05D006168 ORTHO05D007602 1.3e-23 113.6 133 51.1
EL10Ac8g18962 Beta vulgaris HOM05D006168 ORTHO05D007602 1.3e-23 113.6 139 48.9
Sabra04G0045100 Salix brachista HOM05D006168 ORTHO05D007602 1.7e-23 113.2 133 50.4
Rhsim12G0137000 Rhododendron simsii HOM05D006168 ORTHO05D007602 2.2e-23 112.8 133 48.9
Thhalv10021722m.g Eutrema salsugineum HOM05D006168 ORTHO05D007602 2.9e-23 112.5 133 51.9
QL10p033704 Quercus lobata HOM05D006168 ORTHO05D007602 2.9e-23 112.5 135 51.1
CANSAT35G1332 Cannabis sativa HOM05D006168 ORTHO05D007602 4.9e-23 111.7 122 50.0
FAN04G0186 Fragaria x ananassa HOM05D006168 ORTHO05D007602 4.9e-23 111.7 144 46.5
AUR62028326 Chenopodium quinoa HOM05D006168 ORTHO05D007602 6.4e-23 111.3 141 48.2
Lsat_1_v5_gn_2_6441 Lactuca sativa HOM05D006168 ORTHO05D007602 6.4e-23 111.3 132 47.7
TWI81G0790 Tripterygium wilfordii HOM05D006168 ORTHO05D007602 6.4e-23 111.3 135 48.9
Hund08905 Selenicereus undatus HOM05D006168 ORTHO05D007602 8.3e-23 110.9 143 48.3
Cfa017805 Carpinus fangiana HOM05D006168 ORTHO05D007602 1.1e-22 110.5 135 49.6
CDE04G1298 Ceratophyllum demersum HOM05D006168 ORTHO05D007602 1.1e-22 110.5 136 46.3
ClCG01G014720 Citrullus lanatus HOM05D006168 ORTHO05D007602 1.9e-22 109.8 136 50.7
CsaV3_1G007610 Cucumis sativus L. HOM05D006168 ORTHO05D007602 1.9e-22 109.8 136 48.5
MBI06_g12548_MAGBIO Magnolia biondii HOM05D006168 ORTHO05D007602 1.9e-22 109.8 136 47.8
PGSC0003DMG400027059 Solanum tuberosum HOM05D006168 ORTHO05D007602 1.9e-22 109.8 119 51.3
MELO3C002180.2 Cucumis melo HOM05D006168 ORTHO05D007602 3.2e-22 109.0 136 50.0
Dinv03501 Davidia involucrata HOM05D006168 ORTHO05D007602 3.2e-22 109.0 137 48.2
Dinv03506 Davidia involucrata HOM05D006168 ORTHO05D007602 3.2e-22 109.0 137 48.2
Solyc06g072170.2 Solanum lycopersicum HOM05D006168 ORTHO05D007602 3.2e-22 109.0 119 50.4
Sopen06g028470 Solanum pennellii HOM05D006168 ORTHO05D007602 3.2e-22 109.0 119 50.4
AL3G15460 Arabidopsis lyrata HOM05D006168 ORTHO05D007602 4.1e-22 108.6 133 50.4
FAN18G0639 Fragaria x ananassa HOM05D006168 ORTHO05D007602 4.1e-22 108.6 145 46.2
Potri.004G067300 Populus trichocarpa HOM05D006168 ORTHO05D007602 4.1e-22 108.6 131 48.9
Aqoxy2G03978 Aquilegia oxysepala HOM05D006168 ORTHO05D007602 7.0e-22 107.8 132 46.2
FvH4_5g18550 Fragaria vesca HOM05D006168 ORTHO05D007602 7.0e-22 107.8 145 46.2
PSO063G5228 Papaver somniferum HOM05D006168 ORTHO05D007602 7.0e-22 107.8 133 51.1
SEGI_05677 Sequoiadendron giganteum HOM05D006168 ORTHO05D007602 9.2e-22 107.5 128 52.3
A05p42500 Brassica napus HOM05D006168 ORTHO05D007602 1.2e-21 107.1 133 49.6
BraA05t23002Z Brassica rapa HOM05D006168 ORTHO05D007602 1.2e-21 107.1 133 49.6
CDE08G0644 Ceratophyllum demersum HOM05D006168 ORTHO05D007602 1.6e-21 106.7 138 45.7
HanXRQChr14g0428251 Helianthus annuus HOM05D006168 ORTHO05D007602 1.6e-21 106.7 130 46.2
C05p62160 Brassica napus HOM05D006168 ORTHO05D007602 2.1e-21 106.3 133 49.6
BolC5t34874H Brassica oleracea HOM05D006168 ORTHO05D007602 2.1e-21 106.3 133 49.6
Carub.0003s0432 Capsella rubella HOM05D006168 ORTHO05D007602 2.1e-21 106.3 133 49.6
Sp3g03900 Schrenkiella parvula HOM05D006168 ORTHO05D007602 2.7e-21 105.9 132 48.5
PGR083G1429 Punica granatum HOM05D006168 ORTHO05D007602 3.5e-21 105.5 140 47.1
CARHR079400 Cardamine hirsuta HOM05D006168 ORTHO05D007602 4.6e-21 105.1 132 48.5
Lj5g0014337 Lotus japonicus HOM05D006168 ORTHO05D007602 4.6e-21 105.1 140 46.4
TAR629G1867 Trochodendron aralioides HOM05D006168 ORTHO05D007602 4.6e-21 105.1 136 46.3
Eucgr.H00657 Eucalyptus grandis HOM05D006168 ORTHO05D007602 6.0e-21 104.8 142 47.2
FAN08G3581 Fragaria x ananassa HOM05D006168 ORTHO05D007602 7.8e-21 104.4 146 44.5
Atru.chr9.17 Acer truncatum HOM05D006168 ORTHO05D007602 1.3e-20 103.6 137 47.4
MD14G1246600 Malus domestica HOM05D006168 ORTHO05D007602 1.3e-20 103.6 135 47.4
HPP92_020852 Vanilla planifolia HOM05D006168 ORTHO05D007602 1.3e-20 103.6 119 51.3
AT3G05070 Arabidopsis thaliana HOM05D006168 ORTHO05D007602 1.7e-20 103.2 133 48.9
Glyma.20G216400 Glycine max HOM05D006168 ORTHO05D007602 1.7e-20 103.2 133 48.1
MD06G1240400 Malus domestica HOM05D006168 ORTHO05D007602 1.7e-20 103.2 136 46.3
Ciclev10022597m.g Citrus clementina HOM05D006168 ORTHO05D007602 2.3e-20 102.8 89 59.6
Peaxi162Scf00643g00537 Petunia axillaris HOM05D006168 ORTHO05D007602 2.3e-20 102.8 119 49.6
THA.LOC104818656 Tarenaya hassleriana HOM05D006168 ORTHO05D007602 3.0e-20 102.4 130 48.5
SGA_v2.0_scaffold387G50509 Striga asiatica HOM05D006168 ORTHO05D007602 5.1e-20 101.7 136 44.9
unitig_21.g20432 Utricularia gibba HOM05D006168 ORTHO05D007602 6.6e-20 101.3 131 48.9
MSTRG.4316 Avicennia marina HOM05D006168 ORTHO05D007602 1.1e-19 100.5 132 45.5
CSS0046866 Camellia sinensis var. sinensis HOM05D006168 ORTHO05D007602 1.1e-19 100.5 85 58.8
VMungo0720G1915 Vigna mungo HOM05D006168 ORTHO05D007602 1.5e-19 100.1 132 46.2
Glyma.10G174000 Glycine max HOM05D006168 ORTHO05D007602 1.9e-19 99.8 133 47.4
Lalb_Chr21g0311691 Lupinus albus HOM05D006168 ORTHO05D007602 9.5e-19 97.4 135 48.1
Phvul.L006301 Phaseolus vulgaris HOM05D006168 ORTHO05D007602 1.2e-18 97.1 132 45.5
CAN.G65.65 Capsicum annuum HOM05D006168 ORTHO05D007602 2.1e-18 96.3 83 54.2
Haze_18408 Corylus avellana HOM05D006168 ORTHO05D007602 2.8e-18 95.9 79 59.5
BcaC05g29992 Brassica carinata HOM05D006168 ORTHO05D007602 3.6e-18 95.5 133 45.1
Cc02_g29290 Coffea canephora HOM05D006168 ORTHO05D007602 3.6e-18 95.5 154 42.9
Medtr1g077570 Medicago truncatula HOM05D006168 ORTHO05D007602 1.8e-17 93.2 86 52.3
CBR_g57849 Chara braunii HOM05D006168 ORTHO05D007602 2.3e-17 92.8 90 54.4
Migut.D02066 Erythranthe guttata HOM05D006168 ORTHO05D007602 5.2e-17 91.7 144 41.0
Psat6g054520 Pisum sativum HOM05D006168 ORTHO05D007602 5.2e-17 91.7 146 40.4
vmacro16399 Vaccinium macrocarpon HOM05D006168 ORTHO05D007602 6.8e-17 91.3 167 37.7
Cre12.g518300 Chlamydomonas reinhardtii HOM05D006168 ORTHO05D007602 1.5e-16 90.1 120 46.7
Nitab4.5_0000477g0160 Nicotiana tabacum HOM05D006168 ORTHO05D007602 2.6e-16 89.4 85 51.8
Nitab4.5_0002771g0020 Nicotiana tabacum HOM05D006168 ORTHO05D007602 4.4e-16 88.6 84 52.4
Ca_09928_v3 Cicer arietinum L. HOM05D006168 ORTHO05D007602 1.3e-15 87.0 149 40.9
Zm00001eb228960 Zea mays HOM05D006168 ORTHO05D007602 1.7e-15 86.7 163 38.0
Oeu034422.1 Olea europaea HOM05D006168 ORTHO05D007602 1.1e-14 84.0 129 41.1
Os06g0730800 Oryza sativa ssp. japonica HOM05D006168 ORTHO05D007602 7.1e-14 81.3 112 41.1
SalBow8G4549 Salvia bowleyana HOM05D006168 ORTHO05D007602 1.6e-13 80.1 121 43.0
MCO12G027 Micromonas commoda HOM05D006168 ORTHO05D007602 7.8e-13 77.8 122 43.4
arahy.Tifrunner.gnm1.ann1.52MA05 Arachis hypogaea HOM05D006168 ORTHO05D007602 1.0e-12 77.4 133 39.1
RcHm_v2.0_Chr5g0006211 Rosa chinensis HOM05D006168 ORTHO05D007602 1.0e-12 77.4 142 39.4
Sed0015845 Sechium edule HOM05D006168 ORTHO05D007602 6.6e-12 74.7 68 58.8
BcaB04g19282 Brassica carinata HOM05D006168 ORTHO05D007602 4.3e-11 72.0 72 55.6
FAN21G2556 Fragaria x ananassa HOM05D006168 ORTHO05D007602 1.2e-10 70.5 141 36.9
FvH4_3g03920 Fragaria vesca HOM05D006168 ORTHO05D007602 3.6e-10 68.9 141 35.5
FAN11G1802 Fragaria x ananassa HOM05D006168 ORTHO05D007602 4.7e-10 68.6 141 35.5
FAN25G2877 Fragaria x ananassa HOM05D006168 ORTHO05D007602 6.2e-10 68.2 141 35.5
FAN16G2203 Fragaria x ananassa HOM05D006168 ORTHO05D007602 1.1e-09 67.4 141 35.5
Potri.017G154100 Populus trichocarpa HOM05D006168 ORTHO05D007602 1.4e-09 67.0 80 45.0
Sc15g0000010 Simmondsia chinensis HOM05D006168 ORTHO05D007602 9.9e-08 60.8 94 42.6
FAN13G0455 Fragaria x ananassa HOM05D006168 ORTHO05D007602 1.3e-07 60.5 105 39.0
BcaC01g04336 Brassica carinata HOM05D006168 ORTHO05D007602 1.7e-07 60.1 109 40.4
TPR.G8871 Trifolium pratense HOM05D006168 ORTHO05D007602 5.4e-06 55.1 38 65.8


User provided reference genes

Program Settings