Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0133s0004 Marchantia polymorpha HOM05D004671 ORTHO05D005638 1.6e-308 1062.0 558 100.0
Pp3c16_7220 Physcomitrium patens HOM05D004671 ORTHO05D005638 9.0e-171 604.4 563 58.6
AagrBONN_evm.TU.Sc2ySwM_344.423 Anthoceros agrestis HOM05D004671 ORTHO05D005638 1.2e-151 540.8 563 53.1
TAR629G1771 Trochodendron aralioides HOM05D004671 ORTHO05D005638 6.8e-110 402.1 560 43.0
GSVIVG01028933001 Vitis vinifera HOM05D004671 ORTHO05D005638 5.8e-109 399.1 559 43.3
Nn3g16880 Nelumbo nucifera HOM05D004671 ORTHO05D005638 1.4e-107 394.4 539 43.4
ATR0737G144 Amborella trichopoda HOM05D004671 ORTHO05D005638 1.0e-105 388.3 554 42.4
Dinv24388 Davidia involucrata HOM05D004671 ORTHO05D005638 3.2e-99 366.7 565 40.9
Duzib205G1877 Durio zibethinus HOM05D004671 ORTHO05D005638 3.0e-97 360.1 581 39.4
Cpa.g.sc107.62 Carica papaya HOM05D004671 ORTHO05D005638 2.8e-95 353.6 578 39.1
Thecc.03G178300 Theobroma cacao HOM05D004671 ORTHO05D005638 6.2e-95 352.4 559 39.4
Gohir.A09G041700 Gossypium hirsutum HOM05D004671 ORTHO05D005638 1.4e-94 351.3 560 40.7
Gorai.006G048800 Gossypium raimondii HOM05D004671 ORTHO05D005638 1.8e-94 350.9 560 40.4
Ciclev10004721m.g Citrus clementina HOM05D004671 ORTHO05D005638 2.4e-94 350.5 561 39.4
Aqoxy3G03421 Aquilegia oxysepala HOM05D004671 ORTHO05D005638 4.0e-94 349.7 561 39.4
Gohir.D09G042500 Gossypium hirsutum HOM05D004671 ORTHO05D005638 1.2e-93 348.2 560 40.2
Cc02_g02840 Coffea canephora HOM05D004671 ORTHO05D005638 1.5e-93 347.8 558 38.5
COL.COLO4_14329 Corchorus olitorius HOM05D004671 ORTHO05D005638 3.4e-93 346.7 562 39.5
ECA233G0868 Erigeron canadensis HOM05D004671 ORTHO05D005638 3.4e-93 346.7 569 39.0
HanXRQChr15g0497081 Helianthus annuus HOM05D004671 ORTHO05D005638 1.3e-92 344.7 566 38.5
HanXRQChr06g0163751 Helianthus annuus HOM05D004671 ORTHO05D005638 2.2e-92 344.0 568 38.7
HanXRQChr10g0304161 Helianthus annuus HOM05D004671 ORTHO05D005638 8.4e-92 342.0 565 38.2
MSTRG.27109 Avicennia marina HOM05D004671 ORTHO05D005638 1.9e-91 340.9 561 38.3
CANSAT21G1725 Cannabis sativa HOM05D004671 ORTHO05D005638 4.2e-91 339.7 561 39.2
CANSAT21G1295 Cannabis sativa HOM05D004671 ORTHO05D005638 5.4e-91 339.3 561 39.2
Nitab4.5_0001951g0070 Nicotiana tabacum HOM05D004671 ORTHO05D005638 9.3e-91 338.6 574 39.0
CiPaw.03G107600 Carya illinoinensis HOM05D004671 ORTHO05D005638 2.1e-90 337.4 550 39.6
Cfa022980 Carpinus fangiana HOM05D004671 ORTHO05D005638 1.0e-89 335.1 560 38.6
DCAR_015049 Daucus carota HOM05D004671 ORTHO05D005638 3.9e-89 333.2 563 38.0
vmacro09835 Vaccinium macrocarpon HOM05D004671 ORTHO05D005638 2.5e-88 330.5 590 37.3
DCAR_010301 Daucus carota HOM05D004671 ORTHO05D005638 5.6e-88 329.3 560 38.2
TWI14G0685 Tripterygium wilfordii HOM05D004671 ORTHO05D005638 1.3e-87 328.2 560 39.1
CAN.G208.79 Capsicum annuum HOM05D004671 ORTHO05D005638 4.8e-87 326.2 563 36.9
CsaV3_3G017180 Cucumis sativus L. HOM05D004671 ORTHO05D005638 4.8e-87 326.2 556 38.1
PSO017G5643 Papaver somniferum HOM05D004671 ORTHO05D005638 4.8e-87 326.2 563 35.9
Cfa002753 Carpinus fangiana HOM05D004671 ORTHO05D005638 6.2e-87 325.9 565 37.3
Atru.chr1.442 Acer truncatum HOM05D004671 ORTHO05D005638 8.1e-87 325.5 547 38.8
Manes.14G025200 Manihot esculenta HOM05D004671 ORTHO05D005638 1.8e-86 324.3 555 37.5
PSO063G7539 Papaver somniferum HOM05D004671 ORTHO05D005638 1.8e-86 324.3 563 35.7
SMO276G0042 Selaginella moellendorffii HOM05D004671 ORTHO05D005638 6.9e-86 322.4 455 43.1
Eucgr.K00269 Eucalyptus grandis HOM05D004671 ORTHO05D005638 1.5e-85 321.2 554 36.6
ClCG05G008100 Citrullus lanatus HOM05D004671 ORTHO05D005638 2.0e-85 320.9 569 37.8
vmacro21316 Vaccinium macrocarpon HOM05D004671 ORTHO05D005638 5.8e-85 319.3 559 37.7
Lsat_1_v5_gn_3_14041 Lactuca sativa HOM05D004671 ORTHO05D005638 1.3e-84 318.2 567 37.7
GSVIVG01017918001 Vitis vinifera HOM05D004671 ORTHO05D005638 2.9e-84 317.0 561 37.8
MD07G1271200 Malus domestica HOM05D004671 ORTHO05D005638 4.9e-84 316.2 552 37.7
PGR142G1152 Punica granatum HOM05D004671 ORTHO05D005638 2.4e-83 313.9 562 37.0
Lsat_1_v5_gn_8_8441 Lactuca sativa HOM05D004671 ORTHO05D005638 7.1e-83 312.4 565 36.6
Sc13g0008790 Simmondsia chinensis HOM05D004671 ORTHO05D005638 2.7e-82 310.5 557 36.3
Actinidia03123 Actinidia chinensis HOM05D004671 ORTHO05D005638 6.0e-82 309.3 461 39.9
SGA_v2.0_scaffold60G21057 Striga asiatica HOM05D004671 ORTHO05D005638 1.7e-81 307.8 558 35.8
Migut.K00770 Erythranthe guttata HOM05D004671 ORTHO05D005638 3.9e-81 306.6 559 36.0
Glyma.20G159500 Glycine max HOM05D004671 ORTHO05D005638 8.7e-81 305.4 562 37.9
SMO143G0293 Selaginella moellendorffii HOM05D004671 ORTHO05D005638 1.1e-80 305.1 508 39.2
MD01G1202100 Malus domestica HOM05D004671 ORTHO05D005638 5.6e-80 302.8 552 37.0
Rhsim09G0198100 Rhododendron simsii HOM05D004671 ORTHO05D005638 5.6e-80 302.8 523 38.4
arahy.Tifrunner.gnm1.ann1.V0I5I8 Arachis hypogaea HOM05D004671 ORTHO05D005638 9.6e-80 302.0 564 36.7
Glyma.10G234800 Glycine max HOM05D004671 ORTHO05D005638 1.6e-79 301.2 562 37.4
Prupe.2G295500 Prunus persica HOM05D004671 ORTHO05D005638 6.2e-79 299.3 555 36.0
AL6G42740 Arabidopsis lyrata HOM05D004671 ORTHO05D005638 1.2e-77 295.0 549 36.2
THA.LOC104818634 Tarenaya hassleriana HOM05D004671 ORTHO05D005638 1.5e-77 294.7 549 34.4
AL5G28510 Arabidopsis lyrata HOM05D004671 ORTHO05D005638 2.6e-77 293.9 549 36.6
Phvul.007G071300 Phaseolus vulgaris HOM05D004671 ORTHO05D005638 1.3e-76 291.6 564 37.4
RcHm_v2.0_Chr1g0377571 Rosa chinensis HOM05D004671 ORTHO05D005638 1.7e-76 291.2 563 35.7
Lalb_Chr06g0161161 Lupinus albus HOM05D004671 ORTHO05D005638 2.2e-76 290.8 563 36.9
FvH4_7g29570 Fragaria vesca HOM05D004671 ORTHO05D005638 2.9e-76 290.4 558 36.2
Haze_25041 Corylus avellana HOM05D004671 ORTHO05D005638 3.8e-76 290.0 535 35.9
AT3G49000 Arabidopsis thaliana HOM05D004671 ORTHO05D005638 8.4e-76 288.9 550 35.8
VMungo0720G2100 Vigna mungo HOM05D004671 ORTHO05D005638 1.4e-75 288.1 562 36.7
Aa31LG4G17500 Aethionema arabicum HOM05D004671 ORTHO05D005638 1.9e-75 287.7 551 35.0
TPR.G27007 Trifolium pratense HOM05D004671 ORTHO05D005638 3.2e-75 287.0 564 35.3
Thhalv10010290m.g Eutrema salsugineum HOM05D004671 ORTHO05D005638 5.5e-75 286.2 550 35.3
FAN01G2609 Fragaria x ananassa HOM05D004671 ORTHO05D005638 5.5e-75 286.2 562 36.3
Lj5g0019412 Lotus japonicus HOM05D004671 ORTHO05D005638 5.5e-75 286.2 563 36.6
FAN06G5094 Fragaria x ananassa HOM05D004671 ORTHO05D005638 9.3e-75 285.4 563 35.9
Carub.0005s1517 Capsella rubella HOM05D004671 ORTHO05D005638 2.1e-74 284.3 559 34.7
BcaC01g02382 Brassica carinata HOM05D004671 ORTHO05D005638 3.5e-74 283.5 550 35.8
BolC3t18845H Brassica oleracea HOM05D004671 ORTHO05D005638 3.5e-74 283.5 550 35.8
Potri.015G144900 Populus trichocarpa HOM05D004671 ORTHO05D005638 3.5e-74 283.5 560 34.8
C03p65870 Brassica napus HOM05D004671 ORTHO05D005638 4.6e-74 283.1 550 35.8
FAN03G0738 Fragaria x ananassa HOM05D004671 ORTHO05D005638 4.6e-74 283.1 560 35.2
FAN10G4176 Fragaria x ananassa HOM05D004671 ORTHO05D005638 4.6e-74 283.1 562 35.4
SalBow1G2445 Salvia bowleyana HOM05D004671 ORTHO05D005638 4.6e-74 283.1 561 34.0
Psat6g198360 Pisum sativum HOM05D004671 ORTHO05D005638 6.0e-74 282.7 554 35.2
EL10Ac3g05622 Beta vulgaris HOM05D004671 ORTHO05D005638 1.0e-73 282.0 559 35.1
Thhalv10003189m.g Eutrema salsugineum HOM05D004671 ORTHO05D005638 2.3e-73 280.8 549 35.3
AUR62015967 Chenopodium quinoa HOM05D004671 ORTHO05D005638 3.9e-73 280.0 574 33.4
FAN06G3892 Fragaria x ananassa HOM05D004671 ORTHO05D005638 3.9e-73 280.0 575 35.7
Sp5g13050 Schrenkiella parvula HOM05D004671 ORTHO05D005638 3.9e-73 280.0 549 34.8
Ca_10754_v3 Cicer arietinum L. HOM05D004671 ORTHO05D005638 5.1e-73 279.6 556 34.9
Medtr1g101100 Medicago truncatula HOM05D004671 ORTHO05D005638 5.1e-73 279.6 557 34.3
arahy.Tifrunner.gnm1.ann1.U8RPI8 Arachis hypogaea HOM05D004671 ORTHO05D005638 6.7e-73 279.3 641 33.5
FAN10G3685 Fragaria x ananassa HOM05D004671 ORTHO05D005638 8.7e-73 278.9 562 35.4
SalBow1G5895 Salvia bowleyana HOM05D004671 ORTHO05D005638 1.5e-72 278.1 571 33.6
SHI26612 Sapria himalayana HOM05D004671 ORTHO05D005638 2.5e-72 277.3 560 33.2
Sabra15G0154400 Salix brachista HOM05D004671 ORTHO05D005638 4.3e-72 276.6 586 33.4
CARHR157820 Cardamine hirsuta HOM05D004671 ORTHO05D005638 1.3e-71 275.0 551 34.1
Hund04757 Selenicereus undatus HOM05D004671 ORTHO05D005638 1.6e-71 274.6 555 33.9
BcaB02g09572 Brassica carinata HOM05D004671 ORTHO05D005638 3.7e-71 273.5 550 35.3
BraA06t25741Z Brassica rapa HOM05D004671 ORTHO05D005638 3.7e-71 273.5 550 35.5
A06p28000 Brassica napus HOM05D004671 ORTHO05D005638 4.8e-71 273.1 550 35.3
HPP92_020192 Vanilla planifolia HOM05D004671 ORTHO05D005638 6.9e-70 269.2 548 33.2
Sc13g0008760 Simmondsia chinensis HOM05D004671 ORTHO05D005638 1.9e-67 261.2 541 34.0
Sed0007536 Sechium edule HOM05D004671 ORTHO05D005638 2.7e-66 257.3 451 39.0
Ah.13g068640 Amaranthus hybridus HOM05D004671 ORTHO05D005638 5.7e-64 249.6 551 32.7
RcHm_v2.0_Chr6g0258831 Rosa chinensis HOM05D004671 ORTHO05D005638 2.1e-63 247.7 550 32.5
Nitab4.5_0000080g0100 Nicotiana tabacum HOM05D004671 ORTHO05D005638 3.7e-63 246.9 569 33.2
Carub.0004s0531 Capsella rubella HOM05D004671 ORTHO05D005638 1.4e-62 245.0 557 32.3
MELO3C031814.2 Cucumis melo HOM05D004671 ORTHO05D005638 1.2e-61 241.9 503 36.0
Zm00001eb160040 Zea mays HOM05D004671 ORTHO05D005638 1.7e-60 238.0 566 31.4
Os01g0679000 Oryza sativa ssp. japonica HOM05D004671 ORTHO05D005638 3.8e-60 236.9 564 31.7
Cre16.g673900 Chlamydomonas reinhardtii HOM05D004671 ORTHO05D005638 2.5e-59 234.2 669 28.7
Sc13g0008680 Simmondsia chinensis HOM05D004671 ORTHO05D005638 3.3e-56 223.8 477 33.1
unitig_37.g12531 Utricularia gibba HOM05D004671 ORTHO05D005638 9.7e-56 222.2 567 32.8
AUR62021173 Chenopodium quinoa HOM05D004671 ORTHO05D005638 2.2e-55 221.1 551 31.4
Sed0027520 Sechium edule HOM05D004671 ORTHO05D005638 4.1e-54 216.9 447 33.6
CDE04G3622 Ceratophyllum demersum HOM05D004671 ORTHO05D005638 1.7e-52 211.5 351 39.6
Peaxi162Scf00848g00012 Petunia axillaris HOM05D004671 ORTHO05D005638 5.0e-52 209.9 409 36.9
Haze_13677 Corylus avellana HOM05D004671 ORTHO05D005638 2.5e-51 207.6 688 29.1
Solyc06g036000.4 Solanum lycopersicum HOM05D004671 ORTHO05D005638 5.5e-51 206.5 409 37.2
Sopen06g011780 Solanum pennellii HOM05D004671 ORTHO05D005638 9.1e-46 189.1 349 38.7
CBR_g5701 Chara braunii HOM05D004671 ORTHO05D005638 2.5e-43 181.0 193 50.8
CBR_g5700 Chara braunii HOM05D004671 ORTHO05D005638 7.2e-43 179.5 185 51.9
arahy.Tifrunner.gnm1.ann1.R5FQEP Arachis hypogaea HOM05D004671 ORTHO05D005638 1.2e-42 178.7 428 32.9
CDE04G1371 Ceratophyllum demersum HOM05D004671 ORTHO05D005638 1.8e-41 174.9 181 48.1
MCO01G383 Micromonas commoda HOM05D004671 ORTHO05D005638 4.4e-40 170.2 552 27.4
QL09p013914 Quercus lobata HOM05D004671 ORTHO05D005638 8.2e-39 166.0 292 37.3
CSS0016908 Camellia sinensis var. sinensis HOM05D004671 ORTHO05D005638 2.2e-36 157.9 145 53.1
arahy.Tifrunner.gnm1.ann1.4LKL39 Arachis hypogaea HOM05D004671 ORTHO05D005638 1.0e-33 149.1 369 31.4
MD07G1271300 Malus domestica HOM05D004671 ORTHO05D005638 1.3e-31 142.1 278 35.6
Ah.13g076510 Amaranthus hybridus HOM05D004671 ORTHO05D007692 2.8e-31 141.0 467 27.2
CSS0035516 Camellia sinensis var. sinensis HOM05D004671 ORTHO05D005638 8.2e-31 139.4 270 38.1
Oeu002719.1 Olea europaea HOM05D004671 ORTHO05D005638 3.5e-29 134.0 284 35.6
Migut.K01220 Erythranthe guttata HOM05D004671 ORTHO05D005638 1.7e-28 131.7 260 36.2
Oeu004097.1 Olea europaea HOM05D004671 ORTHO05D005638 2.2e-28 131.3 245 38.4
Glyma.20G157700 Glycine max HOM05D004671 ORTHO05D005638 4.7e-26 123.6 136 50.0
Zm00001eb440850 Zea mays HOM05D004671 ORTHO05D005638 1.2e-24 119.0 177 42.4
HanXRQChr06g0163701 Helianthus annuus HOM05D001754 ORTHO05D005638 4.4e-24 117.1 410 28.8
Cre11.g476376 Chlamydomonas reinhardtii HOM05D030013 ORTHO05D028799 1.3e-23 115.5 242 35.5
Glyma.12G162990 Glycine max HOM05D004671 ORTHO05D005638 3.1e-22 110.9 145 44.8
CBR_g26425 Chara braunii HOM05D004671 ORTHO05D005638 1.3e-20 105.5 111 50.5
Peaxi162Scf00848g00015 Petunia axillaris HOM05D004671 ORTHO05D005638 3.6e-18 97.4 134 39.6
CAN.G527.1 Capsicum annuum HOM05D004671 ORTHO05D005638 2.3e-17 94.7 239 27.6
BolC8t50021H Brassica oleracea HOM05D004671 ORTHO05D005638 3.5e-13 80.9 169 33.7
C08p23970 Brassica napus HOM05D004671 ORTHO05D005638 5.9e-13 80.1 169 34.3
BcaC07g39376 Brassica carinata HOM05D004671 ORTHO05D005638 3.3e-11 74.3 164 33.5
BcaB01g00761 Brassica carinata HOM05D004671 ORTHO05D005638 2.8e-10 71.2 225 28.4
SEGI_00380 Sequoiadendron giganteum HOM05D004671 ORTHO05D005638 8.0e-10 69.7 67 52.2
PRCOL_00005694 Prasinoderma coloniale HOM05D004671 ORTHO05D005638 6.8e-09 66.6 626 20.9


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