Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0132s0018 Marchantia polymorpha HOM05D006737 ORTHO05D008418 5.0e-182 641.0 318 100.0
Pp3c24_12380 Physcomitrium patens HOM05D006737 ORTHO05D008418 2.8e-36 156.8 268 38.4
Potri.002G203900 Populus trichocarpa HOM05D006737 ORTHO05D008418 4.1e-35 152.9 236 38.1
arahy.Tifrunner.gnm1.ann1.AY1VU4 Arachis hypogaea HOM05D006737 ORTHO05D008418 9.1e-35 151.8 250 35.6
FvH4_2g25800 Fragaria vesca HOM05D006737 ORTHO05D008418 1.2e-34 151.4 236 36.4
FAN24G1027 Fragaria x ananassa HOM05D006737 ORTHO05D008418 1.2e-34 151.4 236 36.4
FAN15G3576 Fragaria x ananassa HOM05D006737 ORTHO05D008418 2.0e-34 150.6 236 36.4
RcHm_v2.0_Chr6g0294111 Rosa chinensis HOM05D006737 ORTHO05D008418 2.0e-34 150.6 236 36.0
FAN27G1696 Fragaria x ananassa HOM05D006737 ORTHO05D008418 2.7e-34 150.2 236 36.0
arahy.Tifrunner.gnm1.ann1.B4PCIP Arachis hypogaea HOM05D006737 ORTHO05D008418 3.5e-34 149.8 254 35.0
GSVIVG01028025001 Vitis vinifera HOM05D006737 ORTHO05D008418 1.0e-33 148.3 236 35.2
Actinidia01489 Actinidia chinensis HOM05D006737 ORTHO05D008418 1.3e-33 147.9 236 35.2
MD11G1309100 Malus domestica HOM05D006737 ORTHO05D008418 1.3e-33 147.9 236 36.0
Atru.chr5.1140 Acer truncatum HOM05D006737 ORTHO05D008418 1.7e-33 147.5 237 36.3
Peaxi162Scf00140g01213 Petunia axillaris HOM05D006737 ORTHO05D008418 2.3e-33 147.1 240 37.1
SalBow2G2271 Salvia bowleyana HOM05D006737 ORTHO05D008418 2.3e-33 147.1 239 36.8
Eucgr.H01107 Eucalyptus grandis HOM05D006737 ORTHO05D008418 2.9e-33 146.7 240 35.4
FAN20G1602 Fragaria x ananassa HOM05D006737 ORTHO05D008418 2.9e-33 146.7 238 35.3
vmacro02447 Vaccinium macrocarpon HOM05D006737 ORTHO05D008418 2.9e-33 146.7 237 37.1
Nn3g21504 Nelumbo nucifera HOM05D006737 ORTHO05D008418 5.0e-33 146.0 236 35.6
Cfa005906 Carpinus fangiana HOM05D006737 ORTHO05D008418 1.1e-32 144.8 236 34.3
Oeu048335.1 Olea europaea HOM05D006737 ORTHO05D008418 1.1e-32 144.8 236 35.6
Ciclev10021225m.g Citrus clementina HOM05D006737 ORTHO05D008418 1.5e-32 144.4 236 34.7
MD03G1288800 Malus domestica HOM05D006737 ORTHO05D008418 1.9e-32 144.1 236 35.6
Lj6g0001904 Lotus japonicus HOM05D006737 ORTHO05D008418 4.2e-32 142.9 236 32.2
Manes.01G219800 Manihot esculenta HOM05D006737 ORTHO05D008418 5.5e-32 142.5 236 33.9
Hund05430 Selenicereus undatus HOM05D006737 ORTHO05D008418 5.5e-32 142.5 235 33.6
TAR365G0544 Trochodendron aralioides HOM05D006737 ORTHO05D008418 7.2e-32 142.1 240 35.4
Cpa.g.sc9.256 Carica papaya HOM05D006737 ORTHO05D008418 9.5e-32 141.7 236 36.0
CiPaw.07G109600 Carya illinoinensis HOM05D006737 ORTHO05D008418 9.5e-32 141.7 236 35.2
Migut.O00484 Erythranthe guttata HOM05D006737 ORTHO05D008418 9.5e-32 141.7 233 37.3
TWI14G0449 Tripterygium wilfordii HOM05D006737 ORTHO05D008418 9.5e-32 141.7 236 34.7
Aqoxy2G02933 Aquilegia oxysepala HOM05D006737 ORTHO05D008418 1.2e-31 141.4 240 35.8
AL6G50710 Arabidopsis lyrata HOM05D006737 ORTHO05D008418 1.2e-31 141.4 234 32.9
PSO407G0435 Papaver somniferum HOM05D006737 ORTHO05D008418 1.6e-31 141.0 240 34.6
Prupe.8G262100 Prunus persica HOM05D006737 ORTHO05D008418 1.6e-31 141.0 236 34.3
Sabra02G0155300 Salix brachista HOM05D006737 ORTHO05D008418 1.6e-31 141.0 266 33.5
A03p31080 Brassica napus HOM05D006737 ORTHO05D008418 2.1e-31 140.6 231 33.3
BraA03t12285Z Brassica rapa HOM05D006737 ORTHO05D008418 2.1e-31 140.6 231 33.3
CSS0030900 Camellia sinensis var. sinensis HOM05D006737 ORTHO05D008418 2.1e-31 140.6 235 34.0
PSO170G1161 Papaver somniferum HOM05D006737 ORTHO05D008418 2.1e-31 140.6 241 35.3
BcaC01g06761 Brassica carinata HOM05D006737 ORTHO05D008418 2.8e-31 140.2 231 32.9
Nitab4.5_0004367g0110 Nicotiana tabacum HOM05D006737 ORTHO05D008418 2.8e-31 140.2 249 34.9
Thecc.01G301300 Theobroma cacao HOM05D006737 ORTHO05D008418 2.8e-31 140.2 268 34.0
CANSAT25G2451 Cannabis sativa HOM05D006737 ORTHO05D008418 3.6e-31 139.8 239 35.1
Phvul.001G207600 Phaseolus vulgaris HOM05D006737 ORTHO05D008418 6.1e-31 139.0 253 32.8
Aa31LG5G2050 Aethionema arabicum HOM05D006737 ORTHO05D008418 8.0e-31 138.7 240 34.2
C03p37890 Brassica napus HOM05D006737 ORTHO05D008418 8.0e-31 138.7 231 33.3
BcaB01g02446 Brassica carinata HOM05D006737 ORTHO05D008418 1.0e-30 138.3 231 32.0
Haze_04944 Corylus avellana HOM05D006737 ORTHO05D008418 1.0e-30 138.3 236 33.1
BolC3t16077H Brassica oleracea HOM05D006737 ORTHO05D008418 2.3e-30 137.1 231 32.9
Sopen06g035940 Solanum pennellii HOM05D006737 ORTHO05D008418 2.3e-30 137.1 236 33.9
PGR119G0152 Punica granatum HOM05D006737 ORTHO05D008418 3.0e-30 136.7 236 33.5
QL12p028401 Quercus lobata HOM05D006737 ORTHO05D008418 3.0e-30 136.7 237 35.4
CARHR250600 Cardamine hirsuta HOM05D006737 ORTHO05D008418 4.0e-30 136.3 231 32.5
Migut.N01508 Erythranthe guttata HOM05D006737 ORTHO05D008418 4.0e-30 136.3 233 36.5
Glyma.19G211400 Glycine max HOM05D006737 ORTHO05D008418 4.0e-30 136.3 236 34.3
COL.COLO4_23338 Corchorus olitorius HOM05D006737 ORTHO05D008418 5.2e-30 136.0 218 37.2
VMungo1383G2597 Vigna mungo HOM05D006737 ORTHO05D008418 5.2e-30 136.0 245 33.1
Carub.0006s3475 Capsella rubella HOM05D006737 ORTHO05D008418 6.8e-30 135.6 231 32.5
ECA236G1530 Erigeron canadensis HOM05D006737 ORTHO05D008418 8.9e-30 135.2 241 35.7
Lalb_Chr02g0146391 Lupinus albus HOM05D006737 ORTHO05D008418 1.2e-29 134.8 233 36.1
MSTRG.12607 Avicennia marina HOM05D006737 ORTHO05D008418 1.5e-29 134.4 239 31.4
CAN.G1209.24 Capsicum annuum HOM05D006737 ORTHO05D008418 1.5e-29 134.4 240 34.2
SGA_v2.0_scaffold198G41142 Striga asiatica HOM05D006737 ORTHO05D008418 1.5e-29 134.4 237 34.2
Solyc06g084570.4 Solanum lycopersicum HOM05D006737 ORTHO05D008418 2.0e-29 134.0 240 33.3
Gorai.008G144900 Gossypium raimondii HOM05D006737 ORTHO05D008418 2.6e-29 133.7 236 33.1
Lsat_1_v5_gn_8_164261 Lactuca sativa HOM05D006737 ORTHO05D008418 2.6e-29 133.7 237 34.6
Sp6g02290 Schrenkiella parvula HOM05D006737 ORTHO05D008418 2.6e-29 133.7 231 32.0
AUR62008669 Chenopodium quinoa HOM05D006737 ORTHO05D008418 3.4e-29 133.3 236 34.3
Thhalv10028823m.g Eutrema salsugineum HOM05D006737 ORTHO05D008418 4.4e-29 132.9 231 31.6
Gohir.D12G133900 Gossypium hirsutum HOM05D006737 ORTHO05D008418 5.7e-29 132.5 236 33.1
Sc05g0003760 Simmondsia chinensis HOM05D006737 ORTHO05D008418 5.7e-29 132.5 238 35.3
Migut.J01135 Erythranthe guttata HOM05D006737 ORTHO05D008418 9.8e-29 131.7 233 35.6
Gorai.004G090400 Gossypium raimondii HOM05D006737 ORTHO05D008418 9.8e-29 131.7 235 34.0
EL10Ac7g17513 Beta vulgaris HOM05D006737 ORTHO05D008418 1.7e-28 131.0 236 33.5
Gohir.D08G085900 Gossypium hirsutum HOM05D006737 ORTHO05D008418 1.7e-28 131.0 235 34.0
Rhsim13G0009900 Rhododendron simsii HOM05D006737 ORTHO05D008418 1.7e-28 131.0 248 33.1
Gohir.A12G130100 Gossypium hirsutum HOM05D006737 ORTHO05D008418 2.2e-28 130.6 239 32.2
Gohir.A08G076400 Gossypium hirsutum HOM05D006737 ORTHO05D008418 2.8e-28 130.2 235 33.6
MBI19_g26092_MAGBIO Magnolia biondii HOM05D006737 ORTHO05D008418 3.7e-28 129.8 237 33.3
DCAR_002840 Daucus carota HOM05D006737 ORTHO05D008418 6.3e-28 129.0 237 33.3
CDE01G0235 Ceratophyllum demersum HOM05D006737 ORTHO05D008418 8.3e-28 128.6 236 33.1
Os07g0247100 Oryza sativa ssp. japonica HOM05D006737 ORTHO05D008418 1.1e-27 128.3 239 34.3
AT4G02405 Arabidopsis thaliana HOM05D006737 ORTHO05D008418 1.4e-27 127.9 213 32.4
Zm00001eb097030 Zea mays HOM05D006737 ORTHO05D008418 1.4e-27 127.9 237 33.8
AUR62025575 Chenopodium quinoa HOM05D006737 ORTHO05D008418 1.8e-27 127.5 236 34.3
Duzib138G1512 Durio zibethinus HOM05D006737 ORTHO05D008418 3.1e-27 126.7 187 35.3
ClCG01G014930 Citrullus lanatus HOM05D006737 ORTHO05D008418 4.1e-27 126.3 238 32.8
Hma1.2p1_0491F.1_g164620 Hydrangea macrophylla HOM05D006737 ORTHO05D008418 3.5e-26 123.2 215 34.0
CiPaw.07G109800 Carya illinoinensis HOM05D006737 ORTHO05D008418 5.9e-26 122.5 273 30.0
Cc01_g20900 Coffea canephora HOM05D006737 ORTHO05D008418 5.9e-26 122.5 236 30.1
CsaV3_6G041030 Cucumis sativus L. HOM05D006737 ORTHO05D008418 2.5e-24 117.1 243 30.5
MELO3C024580.2 Cucumis melo HOM05D006737 ORTHO05D008418 3.3e-24 116.7 243 30.5
HanXRQChr04g0114161 Helianthus annuus HOM05D006737 ORTHO05D008418 1.6e-23 114.4 215 34.4
MBI19_g25361_MAGBIO Magnolia biondii HOM05D006737 ORTHO05D008418 6.8e-22 109.0 262 30.5
Sed0017513 Sechium edule HOM05D006737 ORTHO05D008418 1.9e-19 100.9 159 34.0
Oeu010666.1 Olea europaea HOM05D006737 ORTHO05D008418 2.3e-17 94.0 106 40.6
Nitab4.5_0002820g0110 Nicotiana tabacum HOM05D006737 ORTHO05D008418 3.2e-11 73.6 150 34.7
Lj2A1195G25 Lonicera japonica HOM05D006737 ORTHO05D008418 4.6e-10 69.7 181 29.8
Dinv33057 Davidia involucrata HOM05D006737 ORTHO05D008418 6.0e-10 69.3 75 40.0
Cc10_g02850 Coffea canephora HOM05D006598 ORTHO05D008132 1.7e-09 67.8 112 36.6
PGSC0003DMG400024036 Solanum tuberosum HOM05D006737 ORTHO05D008418 2.3e-09 67.4 83 34.9
Glyma.06G032100 Glycine max HOM05D006598 ORTHO05D008132 3.6e-07 60.1 112 32.1
TWI36G0987 Tripterygium wilfordii HOM05D006598 ORTHO05D008132 3.6e-07 60.1 112 31.2
MCO02G241 Micromonas commoda HOM05D006737 ORTHO05D008418 4.7e-07 59.7 216 26.9
Phvul.009G057800 Phaseolus vulgaris HOM05D006598 ORTHO05D008132 4.7e-07 59.7 112 32.1
arahy.Tifrunner.gnm1.ann1.MB1A81 Arachis hypogaea HOM05D006737 ORTHO05D008418 8.1e-07 58.9 116 34.5
ECA232G3558 Erigeron canadensis HOM05D006598 ORTHO05D008132 8.1e-07 58.9 113 32.7
CSS0013932 Camellia sinensis var. sinensis HOM05D006598 ORTHO05D008132 1.1e-06 58.5 112 31.2
VMungo1309G1899 Vigna mungo HOM05D006598 ORTHO05D008132 1.4e-06 58.2 112 32.1
Dinv36084 Davidia involucrata HOM05D006598 ORTHO05D008132 1.8e-06 57.8 112 32.1
Dinv39426 Davidia involucrata HOM05D006598 ORTHO05D008132 2.3e-06 57.4 112 32.1
Glyma.04G032000 Glycine max HOM05D006598 ORTHO05D008132 2.3e-06 57.4 112 31.2
SMO151G0006 Selaginella moellendorffii HOM05D006737 ORTHO05D008418 2.3e-06 57.4 116 31.9
Psat5g017160 Pisum sativum HOM05D006598 ORTHO05D008132 3.1e-06 57.0 112 31.2
Rhsim06G0033600 Rhododendron simsii HOM05D006598 ORTHO05D008132 3.1e-06 57.0 114 32.5
Actinidia38007 Actinidia chinensis HOM05D006598 ORTHO05D008132 5.2e-06 56.2 112 31.2
Pp3c8_2950 Physcomitrium patens HOM05D006598 ORTHO05D008132 5.2e-06 56.2 118 31.4


User provided reference genes

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