Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0129s0050 Marchantia polymorpha HOM05D005895 ORTHO05D007916 0.0e+00 1245.7 622 100.0
MBI10_g00734_MAGBIO Magnolia biondii HOM05D005895 ORTHO05D007916 3.7e-205 718.8 508 69.7
Eucgr.H02516 Eucalyptus grandis HOM05D005895 ORTHO05D007916 2.0e-203 713.0 561 64.2
Atru.chr11.2133 Acer truncatum HOM05D005895 ORTHO05D007916 2.6e-203 712.6 539 65.7
Pp3c12_14340 Physcomitrium patens HOM05D005895 ORTHO05D007916 3.4e-203 712.2 506 70.4
Haze_12237 Corylus avellana HOM05D005895 ORTHO05D007916 4.5e-203 711.8 509 68.4
Atru.chr11.2117 Acer truncatum HOM05D005895 ORTHO05D007916 1.0e-202 710.7 539 65.5
Gorai.012G172600 Gossypium raimondii HOM05D005895 ORTHO05D007916 2.2e-202 709.5 537 65.7
CsaV3_5G031240 Cucumis sativus L. HOM05D005895 ORTHO05D007916 2.9e-202 709.1 562 63.5
MD13G1098000 Malus domestica HOM05D005895 ORTHO05D007916 5.0e-202 708.4 510 67.8
Ciclev10030909m.g Citrus clementina HOM05D005895 ORTHO05D007916 8.5e-202 707.6 575 63.1
MELO3C011963.2 Cucumis melo HOM05D005895 ORTHO05D007916 1.1e-201 707.2 562 63.3
COL.COLO4_24246 Corchorus olitorius HOM05D005895 ORTHO05D007916 1.4e-201 706.8 507 68.2
Gohir.A04G136400 Gossypium hirsutum HOM05D005895 ORTHO05D007916 1.4e-201 706.8 551 64.6
CANSAT01G2589 Cannabis sativa HOM05D005895 ORTHO05D007916 2.5e-201 706.1 510 68.4
THA.LOC104822982 Tarenaya hassleriana HOM05D005895 ORTHO05D007916 2.5e-201 706.1 508 68.5
GSVIVG01004086001 Vitis vinifera HOM05D005895 ORTHO05D007916 4.2e-201 705.3 510 68.0
Cfa009199 Carpinus fangiana HOM05D005895 ORTHO05D007916 9.3e-201 704.1 506 67.8
CAN.G7.20 Capsicum annuum HOM05D005895 ORTHO05D007916 1.2e-200 703.7 509 68.2
Thhalv10018314m.g Eutrema salsugineum HOM05D005895 ORTHO05D007916 4.6e-200 701.8 510 67.5
Migut.E00194 Erythranthe guttata HOM05D005895 ORTHO05D007916 1.3e-199 700.3 510 68.0
ECA233G5390 Erigeron canadensis HOM05D005895 ORTHO05D007916 2.3e-199 699.5 508 67.7
Prupe.1G247400 Prunus persica HOM05D005895 ORTHO05D007916 6.7e-199 698.0 541 64.7
MD16G1098900 Malus domestica HOM05D005895 ORTHO05D007916 8.7e-199 697.6 510 66.9
Hund06020 Selenicereus undatus HOM05D005895 ORTHO05D007916 8.7e-199 697.6 510 67.8
Sp5g25720 Schrenkiella parvula HOM05D005895 ORTHO05D007916 4.3e-198 695.3 510 67.5
Thecc.02G257400 Theobroma cacao HOM05D005895 ORTHO05D007916 7.4e-198 694.5 507 67.3
Solyc04g025540.3 Solanum lycopersicum HOM05D005895 ORTHO05D007916 1.3e-197 693.7 506 67.6
Sopen04g012770 Solanum pennellii HOM05D005895 ORTHO05D007916 1.3e-197 693.7 509 67.2
SalBow8G2958 Salvia bowleyana HOM05D005895 ORTHO05D007916 2.2e-197 693.0 528 65.5
BcaB05g24593 Brassica carinata HOM05D005895 ORTHO05D007916 2.8e-197 692.6 510 67.6
PGR119G2505 Punica granatum HOM05D005895 ORTHO05D007916 2.8e-197 692.6 537 65.0
TWI36G0590 Tripterygium wilfordii HOM05D005895 ORTHO05D007916 3.7e-197 692.2 509 68.0
Gohir.D04G179500 Gossypium hirsutum HOM05D005895 ORTHO05D007916 4.8e-197 691.8 532 65.4
arahy.Tifrunner.gnm1.ann1.LQ91H7 Arachis hypogaea HOM05D005895 ORTHO05D007916 8.2e-197 691.0 511 65.8
A02p16660 Brassica napus HOM05D005895 ORTHO05D007916 8.2e-197 691.0 511 67.7
BraA02t06722Z Brassica rapa HOM05D005895 ORTHO05D007916 8.2e-197 691.0 511 67.7
C02p27920 Brassica napus HOM05D005895 ORTHO05D007916 1.4e-196 690.3 511 67.3
BolC2t08837H Brassica oleracea HOM05D005895 ORTHO05D007916 1.4e-196 690.3 511 67.3
CARHR063780 Cardamine hirsuta HOM05D005895 ORTHO05D007916 1.8e-196 689.9 510 67.1
Actinidia27801 Actinidia chinensis HOM05D005895 ORTHO05D007916 2.4e-196 689.5 508 66.5
AT1G70570 Arabidopsis thaliana HOM05D005895 ORTHO05D007916 2.4e-196 689.5 510 67.1
TAR371G0306 Trochodendron aralioides HOM05D005895 ORTHO05D007916 3.1e-196 689.1 539 64.9
CSS0018548 Camellia sinensis var. sinensis HOM05D005895 ORTHO05D007916 4.1e-196 688.7 506 67.4
Cc04_g11160 Coffea canephora HOM05D005895 ORTHO05D007916 4.1e-196 688.7 509 66.6
QL03p058522 Quercus lobata HOM05D005895 ORTHO05D007916 6.9e-196 688.0 538 63.4
AL2G29960 Arabidopsis lyrata HOM05D005895 ORTHO05D007916 1.2e-195 687.2 510 66.9
Potri.010G044900 Populus trichocarpa HOM05D005895 ORTHO05D007916 1.2e-195 687.2 538 64.1
Carub.0002s1729 Capsella rubella HOM05D005895 ORTHO05D007916 2.0e-195 686.4 510 67.1
Sed0023548 Sechium edule HOM05D005895 ORTHO05D007916 2.0e-195 686.4 557 62.8
Lj6A811T72 Lonicera japonica HOM05D005895 ORTHO05D007916 2.6e-195 686.0 508 66.3
Sc04g0009430 Simmondsia chinensis HOM05D005895 ORTHO05D007916 7.7e-195 684.5 519 67.1
Lj4g0008127 Lotus japonicus HOM05D005895 ORTHO05D007916 1.7e-194 683.3 510 66.1
PSO017G6602 Papaver somniferum HOM05D005895 ORTHO05D007916 1.7e-194 683.3 536 63.6
FvH4_4g25910 Fragaria vesca HOM05D005895 ORTHO05D007916 2.2e-194 682.9 543 63.7
PSO478G2260 Papaver somniferum HOM05D005895 ORTHO05D007916 2.9e-194 682.6 536 63.8
Aqoxy5G03807 Aquilegia oxysepala HOM05D005895 ORTHO05D007916 1.4e-193 680.2 576 61.3
Glyma.08G283100 Glycine max HOM05D005895 ORTHO05D007916 1.9e-193 679.9 510 65.3
Aa31LG4G10380 Aethionema arabicum HOM05D005895 ORTHO05D007916 2.5e-193 679.5 543 63.7
BcaC03g15207 Brassica carinata HOM05D005895 ORTHO05D007916 2.5e-193 679.5 496 67.9
Gorai.005G179700 Gossypium raimondii HOM05D005895 ORTHO05D007916 2.5e-193 679.5 510 66.5
TPR.G34672 Trifolium pratense HOM05D005895 ORTHO05D007916 2.5e-193 679.5 510 66.1
CiPaw.05G183400 Carya illinoinensis HOM05D005895 ORTHO05D007916 5.5e-193 678.3 507 65.5
DCAR_007061 Daucus carota HOM05D005895 ORTHO05D007916 5.5e-193 678.3 506 65.8
AUR62024296 Chenopodium quinoa HOM05D005895 ORTHO05D007916 1.2e-192 677.2 511 66.1
Ah.03g133150 Amaranthus hybridus HOM05D005895 ORTHO05D007916 1.6e-192 676.8 511 65.6
FAN07G1086 Fragaria x ananassa HOM05D005895 ORTHO05D007916 2.1e-192 676.4 543 63.5
SMO119G0060 Selaginella moellendorffii HOM05D005895 ORTHO05D007916 2.7e-192 676.0 544 63.6
RcHm_v2.0_Chr4g0433361 Rosa chinensis HOM05D005895 ORTHO05D007916 3.6e-192 675.6 510 65.3
Medtr8g069525 Medicago truncatula HOM05D005895 ORTHO05D007916 4.6e-192 675.2 553 61.5
Cpa.g.sc33.4 Carica papaya HOM05D005895 ORTHO05D007916 1.4e-191 673.7 529 64.3
Sabra10G0023200 Salix brachista HOM05D005895 ORTHO05D007916 1.4e-191 673.7 523 64.2
Lalb_Chr05g0228401 Lupinus albus HOM05D005895 ORTHO05D007916 2.3e-191 672.9 511 64.4
EL10Ac6g13787 Beta vulgaris HOM05D005895 ORTHO05D007916 3.0e-191 672.5 531 64.2
AUR62005446 Chenopodium quinoa HOM05D005895 ORTHO05D007916 3.0e-191 672.5 511 65.6
FAN12G2739 Fragaria x ananassa HOM05D005895 ORTHO05D007916 3.0e-191 672.5 542 63.3
FAN12G1268 Fragaria x ananassa HOM05D005895 ORTHO05D007916 3.9e-191 672.2 543 63.2
HanXRQChr08g0208071 Helianthus annuus HOM05D005895 ORTHO05D007916 1.1e-190 670.6 508 65.2
vmacro01130 Vaccinium macrocarpon HOM05D005895 ORTHO05D007916 2.6e-190 669.5 548 62.2
HPP92_003081 Vanilla planifolia HOM05D005895 ORTHO05D007916 3.7e-189 665.6 508 66.3
FAN17G0264 Fragaria x ananassa HOM05D005895 ORTHO05D007916 1.2e-187 660.6 574 59.9
VMungo0251G0514 Vigna mungo HOM05D005895 ORTHO05D007916 1.2e-187 660.6 531 62.0
Zm00001eb231230 Zea mays HOM05D005895 ORTHO05D007916 3.4e-187 659.1 549 63.2
Aqoxy3G01161 Aquilegia oxysepala HOM05D005895 ORTHO05D007916 1.7e-186 656.8 508 64.4
Os02g0131200 Oryza sativa ssp. japonica HOM05D005895 ORTHO05D007916 1.4e-185 653.7 569 61.2
Nitab4.5_0006332g0030 Nicotiana tabacum HOM05D005895 ORTHO05D007916 5.5e-185 651.7 561 60.2
ATR0585G083 Amborella trichopoda HOM05D005895 ORTHO05D007916 1.8e-183 646.7 513 64.1
Gohir.D02G159600 Gossypium hirsutum HOM05D005895 ORTHO05D007916 9.7e-182 641.0 547 61.1
AagrBONN_evm.TU.Sc2ySwM_368.1304 Anthoceros agrestis HOM05D005895 ORTHO05D007916 8.2e-181 637.9 449 71.5
FAN22G0931 Fragaria x ananassa HOM05D005895 ORTHO05D007916 7.7e-179 631.3 577 58.2
MSTRG.2417 Avicennia marina HOM05D005895 ORTHO05D007916 4.2e-177 625.5 446 68.2
ClCG05G025660 Citrullus lanatus HOM05D005895 ORTHO05D007916 1.0e-175 620.9 562 58.4
Phvul.003G063900 Phaseolus vulgaris HOM05D005895 ORTHO05D007916 2.6e-174 616.3 464 64.0
Nitab4.5_0000370g0030 Nicotiana tabacum HOM05D005895 ORTHO05D007916 6.3e-173 611.7 561 57.9
Lsat_1_v5_gn_8_150700 Lactuca sativa HOM05D005895 ORTHO05D007916 3.1e-172 609.4 508 61.8
Nn4g22655 Nelumbo nucifera HOM05D005895 ORTHO05D007916 1.3e-170 604.0 510 60.8
Manes.12G024300 Manihot esculenta HOM05D005895 ORTHO05D007916 1.1e-169 600.9 465 64.9
unitig_52.g17177 Utricularia gibba HOM05D005895 ORTHO05D007916 4.7e-168 595.5 475 64.2
Psat0s3772g0040 Pisum sativum HOM05D005895 ORTHO05D007916 8.0e-168 594.7 461 64.9
arahy.Tifrunner.gnm1.ann1.0I87EX Arachis hypogaea HOM05D005895 ORTHO05D007916 1.0e-167 594.3 438 65.5
Manes.13G025800 Manihot esculenta HOM05D005895 ORTHO05D007916 4.1e-164 582.4 436 66.5
Ca_22578_v3 Cicer arietinum L. HOM05D005895 ORTHO05D007916 5.4e-164 582.0 518 58.9
Oeu059911.1 Olea europaea HOM05D005895 ORTHO05D007916 1.2e-163 580.9 507 59.4
Gohir.A03G136300 Gossypium hirsutum HOM05D005895 ORTHO05D007916 6.5e-162 575.1 478 60.7
THA.LOC104818151 Tarenaya hassleriana HOM05D005895 ORTHO05D007916 7.5e-158 561.6 406 67.5
Sed0009772 Sechium edule HOM05D005895 ORTHO05D007916 1.3e-157 560.8 447 63.3
Zm00001eb209010 Zea mays HOM05D005895 ORTHO05D007916 4.1e-156 555.8 510 57.8
Peaxi162Scf01242g00143 Petunia axillaris HOM05D005895 ORTHO05D007916 5.4e-148 528.9 363 68.6
Duzib251G0200 Durio zibethinus HOM05D005895 ORTHO05D007916 5.6e-145 518.8 510 55.1
Pp3c10_19590 Physcomitrium patens HOM05D005895 ORTHO05D007916 2.4e-124 450.3 370 62.2
Dinv24803 Davidia involucrata HOM05D005895 ORTHO05D007916 4.3e-121 439.5 332 65.1
SHI17741 Sapria himalayana HOM05D000002 ORTHO05D000001 4.5e-78 296.6 253 60.9
FAN18G3006 Fragaria x ananassa HOM05D005895 ORTHO05D007916 1.3e-72 278.5 200 67.5
CBR_g37586 Chara braunii HOM05D000019 ORTHO05D000048 2.0e-65 254.6 274 49.6
CBR_g37584 Chara braunii HOM05D000019 ORTHO05D000048 6.3e-64 249.6 209 60.8
SEGI_05407 Sequoiadendron giganteum HOM05D005895 ORTHO05D007916 1.3e-45 188.7 141 63.1
SEGI_24305 Sequoiadendron giganteum HOM05D005895 ORTHO05D007916 2.2e-40 171.4 100 78.0
Peaxi162Scf02256g00001 Petunia axillaris HOM05D005895 ORTHO05D007916 1.1e-36 159.1 144 59.0
SEGI_08481 Sequoiadendron giganteum HOM05D005895 ORTHO05D007916 1.5e-33 148.7 102 70.6
BcaB08g34808 Brassica carinata HOM05D005895 ORTHO05D007916 1.6e-30 138.7 102 66.7
SMO163G0072 Selaginella moellendorffii HOM05D005895 ORTHO05D007916 2.3e-29 134.8 159 47.2
DCAR_028023 Daucus carota HOM05D005895 ORTHO05D007916 5.4e-23 113.6 77 71.4
Ah.07g201790 Amaranthus hybridus HOM05D005895 ORTHO05D007916 3.0e-21 107.8 66 74.2
BcaB05g24594 Brassica carinata HOM05D005895 ORTHO05D012801 1.3e-16 92.4 74 66.2
A02p16670 Brassica napus HOM05D005895 ORTHO05D012801 2.9e-16 91.3 62 72.6
BraA02t06723Z Brassica rapa HOM05D005895 ORTHO05D012801 2.9e-16 91.3 62 72.6
Rhsim12G0041200 Rhododendron simsii HOM05D005895 ORTHO05D007916 4.1e-15 87.4 69 59.4
C02p27930 Brassica napus HOM05D005895 ORTHO05D012801 1.6e-14 85.5 65 66.2
BolC2t08838H Brassica oleracea HOM05D005895 ORTHO05D012801 1.6e-14 85.5 65 66.2
DCAR_029453 Daucus carota HOM05D005895 ORTHO05D007916 3.9e-13 80.9 64 60.9
Gorai.012G172500 Gossypium raimondii HOM05D005895 ORTHO05D007916 9.2e-07 59.7 41 65.9
SEGI_38231 Sequoiadendron giganteum HOM05D005895 ORTHO05D007916 3.5e-06 57.8 38 68.4


User provided reference genes

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