Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0129s0003 Marchantia polymorpha HOM05D007388 ORTHO05D009421 3.5e-115 418.3 212 100.0
AagrBONN_evm.TU.Sc2ySwM_368.3296 Anthoceros agrestis HOM05D007388 ORTHO05D009421 8.5e-21 104.8 192 38.0
TAR383G1008 Trochodendron aralioides HOM05D007388 ORTHO05D009421 1.4e-18 97.4 188 35.1
Pp3c12_9640 Physcomitrium patens HOM05D007388 ORTHO05D009421 2.3e-18 96.7 191 35.1
Pp3c4_14700 Physcomitrium patens HOM05D007388 ORTHO05D009421 4.0e-18 95.9 199 34.2
Dinv41838 Davidia involucrata HOM05D007388 ORTHO05D009421 1.2e-17 94.4 184 33.7
MBI19_g11844_MAGBIO Magnolia biondii HOM05D007388 ORTHO05D009421 1.2e-17 94.4 148 37.8
Ciclev10009451m.g Citrus clementina HOM05D007388 ORTHO05D009421 3.4e-17 92.8 155 34.8
CDE06G1148 Ceratophyllum demersum HOM05D007388 ORTHO05D009421 4.4e-17 92.4 182 33.5
PGR044G0912 Punica granatum HOM05D007388 ORTHO05D009421 7.5e-17 91.7 179 35.2
ATR0598G070 Amborella trichopoda HOM05D007388 ORTHO05D009421 9.8e-17 91.3 195 31.8
CAN.G246.5 Capsicum annuum HOM05D007388 ORTHO05D009421 1.7e-16 90.5 175 35.4
Sopen06g034360 Solanum pennellii HOM05D007388 ORTHO05D009421 2.2e-16 90.1 196 31.6
Aqoxy7G01075 Aquilegia oxysepala HOM05D007388 ORTHO05D009421 2.8e-16 89.7 187 36.9
Lj1g0010451 Lotus japonicus HOM05D007388 ORTHO05D009421 2.8e-16 89.7 184 33.7
Nn8g38703 Nelumbo nucifera HOM05D007388 ORTHO05D009421 2.8e-16 89.7 187 36.4
Cfa018015 Carpinus fangiana HOM05D007388 ORTHO05D009421 4.9e-16 89.0 198 32.8
Eucgr.C03150 Eucalyptus grandis HOM05D007388 ORTHO05D009421 4.9e-16 89.0 202 32.2
CSS0004113 Camellia sinensis var. sinensis HOM05D007388 ORTHO05D009421 6.3e-16 88.6 185 31.9
MD15G1051600 Malus domestica HOM05D007388 ORTHO05D009421 8.3e-16 88.2 202 32.7
Migut.A00083 Erythranthe guttata HOM05D007388 ORTHO05D009421 1.4e-15 87.4 159 38.4
Gohir.A05G039100 Gossypium hirsutum HOM05D007388 ORTHO05D009421 1.4e-15 87.4 189 32.3
Solyc06g082970.3 Solanum lycopersicum HOM05D007388 ORTHO05D009421 1.4e-15 87.4 196 31.1
PGSC0003DMG400027673 Solanum tuberosum HOM05D007388 ORTHO05D009421 1.4e-15 87.4 199 32.2
Glyma.04G055400 Glycine max HOM05D007388 ORTHO05D009421 1.8e-15 87.0 188 30.9
ECA240G1505 Erigeron canadensis HOM05D007388 ORTHO05D009421 3.1e-15 86.3 147 34.0
Glyma.06G055600 Glycine max HOM05D007388 ORTHO05D009421 3.1e-15 86.3 179 31.3
Nitab4.5_0001705g0020 Nicotiana tabacum HOM05D007388 ORTHO05D009421 3.1e-15 86.3 173 34.1
Peaxi162Scf00596g00105 Petunia axillaris HOM05D007388 ORTHO05D009421 3.1e-15 86.3 188 33.0
MSTRG.25983 Avicennia marina HOM05D007388 ORTHO05D009421 4.1e-15 85.9 183 35.0
Phvul.009G081500 Phaseolus vulgaris HOM05D007388 ORTHO05D009421 5.4e-15 85.5 178 32.0
Sed0027665 Sechium edule HOM05D007388 ORTHO05D009421 7.0e-15 85.1 148 35.8
CiPaw.16G070200 Carya illinoinensis HOM05D007388 ORTHO05D009421 9.2e-15 84.7 209 30.1
Aa31LG1G13520 Aethionema arabicum HOM05D007388 ORTHO05D009421 1.2e-14 84.3 209 31.1
Gohir.D05G040600 Gossypium hirsutum HOM05D007388 ORTHO05D009421 1.2e-14 84.3 189 31.7
Actinidia25694 Actinidia chinensis HOM05D007388 ORTHO05D009421 2.7e-14 83.2 178 32.0
QL02p016663 Quercus lobata HOM05D007388 ORTHO05D009421 2.7e-14 83.2 183 32.2
COL.COLO4_21128 Corchorus olitorius HOM05D007388 ORTHO05D009421 3.5e-14 82.8 186 32.8
Sp6g23310 Schrenkiella parvula HOM05D007388 ORTHO05D009421 3.5e-14 82.8 199 31.2
AUR62009088 Chenopodium quinoa HOM05D007388 ORTHO05D009421 5.9e-14 82.0 149 35.6
VMungo1309G3057 Vigna mungo HOM05D007388 ORTHO05D009421 5.9e-14 82.0 190 31.6
AUR62020582 Chenopodium quinoa HOM05D007388 ORTHO05D009421 7.7e-14 81.6 162 34.0
Lalb_Chr11g0063321 Lupinus albus HOM05D007388 ORTHO05D009421 1.3e-13 80.9 147 33.3
Potri.006G221900 Populus trichocarpa HOM05D007388 ORTHO05D009421 2.3e-13 80.1 190 31.1
FAN20G0472 Fragaria x ananassa HOM05D007388 ORTHO05D009421 2.9e-13 79.7 179 29.6
Sabra06G0171500 Salix brachista HOM05D007388 ORTHO05D009421 2.9e-13 79.7 186 31.2
DCAR_003716 Daucus carota HOM05D007388 ORTHO05D009421 3.8e-13 79.3 153 30.7
FvH4_2g31130 Fragaria vesca HOM05D007388 ORTHO05D009421 3.8e-13 79.3 179 29.1
HanXRQChr04g0097861 Helianthus annuus HOM05D007388 ORTHO05D009421 3.8e-13 79.3 179 32.4
Thhalv10014636m.g Eutrema salsugineum HOM05D007388 ORTHO05D009421 5.0e-13 79.0 199 29.1
Duzib168G1804 Durio zibethinus HOM05D007388 ORTHO05D009421 6.6e-13 78.6 186 30.1
FAN24G3326 Fragaria x ananassa HOM05D007388 ORTHO05D009421 6.6e-13 78.6 179 29.6
Rhsim10G0152000 Rhododendron simsii HOM05D007388 ORTHO05D009421 8.6e-13 78.2 162 31.5
BcaB08g36472 Brassica carinata HOM05D007388 ORTHO05D009421 1.1e-12 77.8 200 30.0
A10p18840 Brassica napus HOM05D007388 ORTHO05D009421 1.1e-12 77.8 201 29.9
Atru.chr7.1857 Acer truncatum HOM05D007388 ORTHO05D009421 1.5e-12 77.4 200 27.5
Gorai.009G041100 Gossypium raimondii HOM05D007388 ORTHO05D009421 1.5e-12 77.4 161 32.9
PSO421G0687 Papaver somniferum HOM05D007388 ORTHO05D009421 1.5e-12 77.4 184 30.4
CANSAT25G2576 Cannabis sativa HOM05D007388 ORTHO05D009421 1.9e-12 77.0 147 32.7
Os12g0498500 Oryza sativa ssp. japonica HOM05D007388 ORTHO05D009421 1.9e-12 77.0 149 33.6
Atru.BG.20.p Acer truncatum HOM05D007388 ORTHO05D009421 2.5e-12 76.6 130 31.5
CARHR191660 Cardamine hirsuta HOM05D007388 ORTHO05D009421 2.5e-12 76.6 197 28.9
Manes.16G084900 Manihot esculenta HOM05D007388 ORTHO05D009421 2.5e-12 76.6 175 30.9
TPR.G3529 Trifolium pratense HOM05D007388 ORTHO05D009421 2.5e-12 76.6 193 29.5
AT5G21430 Arabidopsis thaliana HOM05D007388 ORTHO05D009421 3.3e-12 76.3 200 29.5
THA.LOC104799581 Tarenaya hassleriana HOM05D007388 ORTHO05D009421 4.3e-12 75.9 199 30.2
Zm00001eb409580 Zea mays HOM05D007388 ORTHO05D009421 4.3e-12 75.9 149 35.6
BraA10t43964Z Brassica rapa HOM05D007388 ORTHO05D009421 5.6e-12 75.5 201 29.9
Lsat_1_v5_gn_7_58400 Lactuca sativa HOM05D007388 ORTHO05D009421 5.6e-12 75.5 164 33.5
AL6G32850 Arabidopsis lyrata HOM05D007388 ORTHO05D009421 7.3e-12 75.1 199 29.1
Cc08_g01260 Coffea canephora HOM05D007388 ORTHO05D009421 7.3e-12 75.1 154 35.1
CsaV3_4G036020 Cucumis sativus L. HOM05D007388 ORTHO05D009421 7.3e-12 75.1 195 30.3
RcHm_v2.0_Chr6g0311651 Rosa chinensis HOM05D007388 ORTHO05D009421 7.3e-12 75.1 188 28.7
ClCG05G015710 Citrullus lanatus HOM05D007388 ORTHO05D009421 9.5e-12 74.7 193 29.5
Psat5g102720 Pisum sativum HOM05D007388 ORTHO05D009421 9.5e-12 74.7 187 27.8
BcaC04g19512 Brassica carinata HOM05D007388 ORTHO05D009421 1.2e-11 74.3 201 29.4
C09p54850 Brassica napus HOM05D007388 ORTHO05D009421 1.2e-11 74.3 201 29.4
BolC9t58346H Brassica oleracea HOM05D007388 ORTHO05D009421 1.2e-11 74.3 201 29.4
CDE07G0202 Ceratophyllum demersum HOM05D007388 ORTHO05D001048 1.2e-11 74.3 145 33.1
MELO3C016910.2 Cucumis melo HOM05D007388 ORTHO05D009421 1.2e-11 74.3 195 29.7
GSVIVG01035454001 Vitis vinifera HOM05D007388 ORTHO05D009421 2.8e-11 73.2 160 31.2
TWI63G1062 Tripterygium wilfordii HOM05D007388 ORTHO05D009421 3.6e-11 72.8 190 30.0
EL10Ac2g03792 Beta vulgaris HOM05D007388 ORTHO05D009421 4.7e-11 72.4 136 32.4
FAN27G0155 Fragaria x ananassa HOM05D007388 ORTHO05D009421 1.4e-10 70.9 196 26.0
Thecc.09G062100 Theobroma cacao HOM05D007388 ORTHO05D009421 1.8e-10 70.5 192 29.2
Medtr3g104980 Medicago truncatula HOM05D007388 ORTHO05D009421 2.3e-10 70.1 176 26.7
Prupe.1G405600 Prunus persica HOM05D007388 ORTHO05D009421 3.0e-10 69.7 184 31.0
Ca_15836_v3 Cicer arietinum L. HOM05D007388 ORTHO05D009421 4.0e-10 69.3 169 28.4
Carub.0006s1952 Capsella rubella HOM05D007388 ORTHO05D009421 8.9e-10 68.2 199 28.1
Oeu000765.1 Olea europaea HOM05D007388 ORTHO05D009421 2.0e-09 67.0 145 34.5
arahy.Tifrunner.gnm1.ann1.044LWD Arachis hypogaea HOM05D000560 ORTHO05D000417 1.7e-08 63.9 164 29.3
arahy.Tifrunner.gnm1.ann1.P6UV73 Arachis hypogaea HOM05D007388 ORTHO05D009421 2.2e-08 63.5 147 29.9
vmacro12914 Vaccinium macrocarpon HOM05D007388 ORTHO05D009421 3.7e-08 62.8 106 34.0
Lj7C227T7 Lonicera japonica HOM05D007388 ORTHO05D009421 1.1e-07 61.2 134 27.6
Nitab4.5_0000268g0090 Nicotiana tabacum HOM05D007388 ORTHO05D009421 7.0e-07 58.5 176 28.4
unitig_4.g30329 Utricularia gibba HOM05D007388 ORTHO05D009421 9.2e-07 58.2 82 39.0


User provided reference genes

Program Settings