Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0128s0022 Marchantia polymorpha HOM05D007550 ORTHO05D009474 1.1e-69 266.5 134 100.0
AagrBONN_evm.TU.Sc2ySwM_344.2781 Anthoceros agrestis HOM05D007550 ORTHO05D009474 7.8e-28 127.5 97 66.0
A10p12800 Brassica napus HOM05D007550 ORTHO05D009474 1.5e-26 123.2 85 64.7
BraA10t43373Z Brassica rapa HOM05D007550 ORTHO05D009474 1.5e-26 123.2 85 64.7
Peaxi162Scf00955g00219 Petunia axillaris HOM05D007550 ORTHO05D009474 1.9e-26 122.9 102 55.9
Actinidia39070 Actinidia chinensis HOM05D007550 ORTHO05D009474 2.5e-26 122.5 103 55.3
FAN16G0277 Fragaria x ananassa HOM05D007550 ORTHO05D009474 4.3e-26 121.7 85 65.9
Dinv10312 Davidia involucrata HOM05D007550 ORTHO05D009474 5.6e-26 121.3 90 62.2
GSVIVG01037778001 Vitis vinifera HOM05D007550 ORTHO05D009474 5.6e-26 121.3 77 71.4
Aa31LG3G11520 Aethionema arabicum HOM05D007550 ORTHO05D009474 7.3e-26 120.9 85 63.5
FAN11G2859 Fragaria x ananassa HOM05D007550 ORTHO05D009474 9.5e-26 120.6 84 70.2
Os01g0762300 Oryza sativa ssp. japonica HOM05D007550 ORTHO05D009474 9.5e-26 120.6 69 72.5
PGSC0003DMG400029800 Solanum tuberosum HOM05D007550 ORTHO05D009474 9.5e-26 120.6 96 56.2
BolC9t57498H Brassica oleracea HOM05D007550 ORTHO05D009474 1.2e-25 120.2 85 63.5
Thhalv10014968m.g Eutrema salsugineum HOM05D007550 ORTHO05D009474 1.2e-25 120.2 100 59.0
QL08p005510 Quercus lobata HOM05D007550 ORTHO05D009474 1.2e-25 120.2 120 55.8
Solyc12g015630.2 Solanum lycopersicum HOM05D007550 ORTHO05D009474 1.2e-25 120.2 105 53.3
Thecc.07G022400 Theobroma cacao HOM05D007550 ORTHO05D009474 1.2e-25 120.2 85 64.7
C09p46340 Brassica napus HOM05D007550 ORTHO05D009474 1.6e-25 119.8 85 63.5
Sc18g0004240 Simmondsia chinensis HOM05D007550 ORTHO05D009474 1.6e-25 119.8 88 67.0
TAR626G1551 Trochodendron aralioides HOM05D007550 ORTHO05D009474 1.6e-25 119.8 75 72.0
Manes.15G063300 Manihot esculenta HOM05D007550 ORTHO05D009474 2.1e-25 119.4 108 58.3
FvH4_3g24050 Fragaria vesca HOM05D007550 ORTHO05D009474 2.8e-25 119.0 136 47.8
AL8G31140 Arabidopsis lyrata HOM05D007550 ORTHO05D009474 3.6e-25 118.6 106 53.8
CiPaw.12G135900 Carya illinoinensis HOM05D007550 ORTHO05D009474 3.6e-25 118.6 88 63.6
CDE06G2160 Ceratophyllum demersum HOM05D007550 ORTHO05D009474 3.6e-25 118.6 113 53.1
Lj1A885G31 Lonicera japonica HOM05D007550 ORTHO05D009474 4.7e-25 118.2 87 62.1
TWI38G1227 Tripterygium wilfordii HOM05D007550 ORTHO05D009474 4.7e-25 118.2 133 51.1
AT5G55570 Arabidopsis thaliana HOM05D007550 ORTHO05D009474 6.2e-25 117.9 99 57.6
Nitab4.5_0001750g0040 Nicotiana tabacum HOM05D007550 ORTHO05D009474 6.2e-25 117.9 86 61.6
Zm00001eb370450 Zea mays HOM05D007550 ORTHO05D009474 6.2e-25 117.9 69 73.9
CAN.G410.43 Capsicum annuum HOM05D007550 ORTHO05D009474 8.1e-25 117.5 70 70.0
Duzib213G0332 Durio zibethinus HOM05D007550 ORTHO05D009474 8.1e-25 117.5 87 63.2
LjContig00272g0022958 Lotus japonicus HOM05D007550 ORTHO05D009474 8.1e-25 117.5 94 60.6
MD11G1204800 Malus domestica HOM05D007550 ORTHO05D009474 8.1e-25 117.5 85 64.7
RcHm_v2.0_Chr5g0042631 Rosa chinensis HOM05D007550 ORTHO05D009474 8.1e-25 117.5 77 68.8
Medtr5g094600 Medicago truncatula HOM05D007550 ORTHO05D009474 1.1e-24 117.1 89 62.9
Lalb_Chr17g0348791 Lupinus albus HOM05D007550 ORTHO05D009474 1.4e-24 116.7 100 60.0
ATR1149G080 Amborella trichopoda HOM05D007550 ORTHO05D009474 1.8e-24 116.3 87 64.4
MELO3C014132.2 Cucumis melo HOM05D007550 ORTHO05D009474 1.8e-24 116.3 70 77.1
Nn1g07439 Nelumbo nucifera HOM05D007550 ORTHO05D009474 2.3e-24 115.9 68 76.5
Nitab4.5_0000163g0330 Nicotiana tabacum HOM05D007550 ORTHO05D009474 3.1e-24 115.5 90 62.2
Sed0001315 Sechium edule HOM05D007550 ORTHO05D009474 4.0e-24 115.2 85 64.7
HanXRQChr13g0408011 Helianthus annuus HOM05D007550 ORTHO05D009474 6.8e-24 114.4 70 72.9
Sabra02G0058600 Salix brachista HOM05D007550 ORTHO05D009474 6.8e-24 114.4 98 58.2
Sopen12g007530 Solanum pennellii HOM05D007550 ORTHO05D009474 8.9e-24 114.0 105 52.4
THA.LOC104817699 Tarenaya hassleriana HOM05D007550 ORTHO05D009474 1.2e-23 113.6 99 59.6
CsaV3_3G004390 Cucumis sativus L. HOM05D007550 ORTHO05D009474 3.4e-23 112.1 69 76.8
ECA240G1453 Erigeron canadensis HOM05D007550 ORTHO05D009474 3.4e-23 112.1 87 58.6
Psat2g008720 Pisum sativum HOM05D007550 ORTHO05D009474 3.4e-23 112.1 110 53.6
Atru.chr2.3607 Acer truncatum HOM05D007550 ORTHO05D009474 4.4e-23 111.7 77 63.6
Cc05_g14670 Coffea canephora HOM05D007550 ORTHO05D009474 5.8e-23 111.3 100 53.0
Migut.M01677 Erythranthe guttata HOM05D007550 ORTHO05D009474 5.8e-23 111.3 86 64.0
Gorai.002G096500 Gossypium raimondii HOM05D007550 ORTHO05D009474 5.8e-23 111.3 87 59.8
CARHR268880 Cardamine hirsuta HOM05D007550 ORTHO05D009474 7.5e-23 110.9 112 50.9
Gohir.A01G087300 Gossypium hirsutum HOM05D007550 ORTHO05D009474 7.5e-23 110.9 87 59.8
Phvul.008G275600 Phaseolus vulgaris HOM05D007550 ORTHO05D009474 7.5e-23 110.9 141 48.2
CBR_g30607 Chara braunii HOM05D007550 ORTHO05D009474 4.9e-22 108.2 97 50.5
Hma1.2p1_0036F.1_g022730 Hydrangea macrophylla HOM05D007550 ORTHO05D009474 8.3e-22 107.5 86 61.6
HPP92_028367 Vanilla planifolia HOM05D007550 ORTHO05D009474 8.3e-22 107.5 73 64.4
DCAR_022604 Daucus carota HOM05D007550 ORTHO05D009474 1.4e-21 106.7 139 46.8
MSTRG.6984 Avicennia marina HOM05D007550 ORTHO05D009474 1.2e-20 103.6 75 64.0
COL.COLO4_09786 Corchorus olitorius HOM05D007550 ORTHO05D009474 7.8e-20 100.9 96 52.1
BcaB08g35917 Brassica carinata HOM05D007550 ORTHO05D009474 3.0e-19 99.0 85 57.6
Pp3c18_5680 Physcomitrium patens HOM05D007550 ORTHO05D009474 1.6e-17 93.2 100 50.0
Cfa020230 Carpinus fangiana HOM05D007550 ORTHO05D009474 1.1e-16 90.5 62 71.0
arahy.Tifrunner.gnm1.ann1.S0MYI4 Arachis hypogaea HOM05D007550 ORTHO05D009474 5.2e-16 88.2 94 47.9
FAN21G0016 Fragaria x ananassa HOM05D007550 ORTHO05D009474 5.2e-16 88.2 74 59.5
Potri.011G085501 Populus trichocarpa HOM05D007550 ORTHO05D009474 5.2e-16 88.2 85 57.6
arahy.Tifrunner.gnm1.ann1.R7ZLS4 Arachis hypogaea HOM05D007550 ORTHO05D009474 6.8e-16 87.8 77 53.2
Oeu005969.1 Olea europaea HOM05D007550 ORTHO05D009474 6.8e-16 87.8 82 54.9
FAN25G3253 Fragaria x ananassa HOM05D007550 ORTHO05D009474 8.9e-16 87.4 124 42.7
PGR031G0516 Punica granatum HOM05D007550 ORTHO05D009474 8.9e-16 87.4 69 63.8
Aqoxy4G02213 Aquilegia oxysepala HOM05D007550 ORTHO05D009474 1.2e-15 87.0 59 67.8
FAN25G1734 Fragaria x ananassa HOM05D007550 ORTHO05D009474 2.6e-15 85.9 124 41.9
Ciclev10009869m.g Citrus clementina HOM05D007550 ORTHO05D009474 4.4e-15 85.1 120 45.0
VMungo0647G1572 Vigna mungo HOM05D007550 ORTHO05D009474 4.4e-15 85.1 84 54.8
Glyma.14G015900 Glycine max HOM05D007550 ORTHO05D009474 5.8e-15 84.7 89 53.9
PRCOL_00004706 Prasinoderma coloniale HOM05D007550 ORTHO05D009474 7.6e-15 84.3 70 54.3
Carub.0008s1594 Capsella rubella HOM05D007550 ORTHO05D009474 9.9e-15 84.0 93 47.3
ClCG10G004590 Citrullus lanatus HOM05D007550 ORTHO05D009474 2.2e-14 82.8 78 53.8
PSO541G5298 Papaver somniferum HOM05D007550 ORTHO05D009474 1.4e-13 80.1 74 52.7
PSO675G9283 Papaver somniferum HOM05D007550 ORTHO05D009474 1.4e-13 80.1 74 52.7
Cre03.g145567 Chlamydomonas reinhardtii HOM05D007550 ORTHO05D009474 4.1e-13 78.6 71 52.1
EL10Ac4g07615 Beta vulgaris HOM05D007550 ORTHO05D009474 5.4e-13 78.2 96 41.7
CANSAT56G0742 Cannabis sativa HOM05D007550 ORTHO05D009474 7.1e-13 77.8 114 43.9
Gohir.D01G073600 Gossypium hirsutum HOM05D007550 ORTHO05D009474 7.1e-13 77.8 73 54.8
SGA_v2.0_scaffold168G38530 Striga asiatica HOM05D007550 ORTHO05D009474 2.1e-12 76.3 78 51.3
Hma1.2p1_0036F.1_g022720 Hydrangea macrophylla HOM05D007550 ORTHO05D009474 8.6e-11 70.9 128 39.8
unitig_899.g15275 Utricularia gibba HOM05D007550 ORTHO05D009474 2.5e-10 69.3 110 40.9
vmacro09669 Vaccinium macrocarpon HOM05D007550 ORTHO05D009474 6.4e-06 54.7 97 34.0


User provided reference genes

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