Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0127s0023 Marchantia polymorpha HOM05D006857 ORTHO05D008679 0.0e+00 1147.1 570 100.0
Pp3c15_24290 Physcomitrium patens HOM05D006857 ORTHO05D008679 3.1e-118 429.9 469 49.9
RcHm_v2.0_Chr4g0395361 Rosa chinensis HOM05D006857 ORTHO05D008679 6.4e-79 299.3 469 40.3
arahy.Tifrunner.gnm1.ann1.I81STG Arachis hypogaea HOM05D006857 ORTHO05D008679 5.0e-76 289.7 470 38.1
arahy.Tifrunner.gnm1.ann1.SJBM1Y Arachis hypogaea HOM05D006857 ORTHO05D008679 4.3e-75 286.6 470 37.9
MD16G1226200 Malus domestica HOM05D006857 ORTHO05D008679 9.5e-75 285.4 458 38.6
Cfa014781 Carpinus fangiana HOM05D006857 ORTHO05D008679 8.0e-74 282.3 462 38.1
CANSAT78G0655 Cannabis sativa HOM05D006857 ORTHO05D008679 1.1e-73 282.0 460 37.6
Lalb_Chr03g0036951 Lupinus albus HOM05D006857 ORTHO05D008679 1.1e-73 282.0 461 37.3
vmacro08554 Vaccinium macrocarpon HOM05D006857 ORTHO05D008679 1.1e-73 282.0 446 39.9
Medtr8g085480 Medicago truncatula HOM05D006857 ORTHO05D008679 1.8e-73 281.2 506 36.8
Ca_17963_v3 Cicer arietinum L. HOM05D006857 ORTHO05D008679 3.1e-73 280.4 457 38.1
Cc03_g06310 Coffea canephora HOM05D006857 ORTHO05D008679 3.1e-73 280.4 455 38.9
EL10Ac3g06657 Beta vulgaris HOM05D006857 ORTHO05D008679 4.0e-73 280.0 458 36.9
Psat7g076560 Pisum sativum HOM05D006857 ORTHO05D008679 4.0e-73 280.0 447 38.9
Prupe.1G048100 Prunus persica HOM05D006857 ORTHO05D008679 5.2e-73 279.6 462 39.0
Rhsim04G0172300 Rhododendron simsii HOM05D006857 ORTHO05D008679 5.2e-73 279.6 456 38.6
Potri.008G171900 Populus trichocarpa HOM05D006857 ORTHO05D008679 8.9e-73 278.9 463 38.0
Haze_11458 Corylus avellana HOM05D006857 ORTHO05D008679 1.5e-72 278.1 464 39.0
ATR0787G032 Amborella trichopoda HOM05D006857 ORTHO05D008679 3.4e-72 276.9 439 36.9
Glyma.10G132600 Glycine max HOM05D006857 ORTHO05D008679 4.4e-72 276.6 454 38.8
MD07G1289900 Malus domestica HOM05D006857 ORTHO05D008679 4.4e-72 276.6 459 39.2
TAR362G0064 Trochodendron aralioides HOM05D006857 ORTHO05D008679 5.8e-72 276.2 451 39.7
FvH4_4g04570 Fragaria vesca HOM05D006857 ORTHO05D008679 7.5e-72 275.8 454 37.2
Actinidia35816 Actinidia chinensis HOM05D006857 ORTHO05D008679 1.3e-71 275.0 449 38.3
Nn1g02958 Nelumbo nucifera HOM05D006857 ORTHO05D008679 1.3e-71 275.0 444 40.5
VMungo0720G0849 Vigna mungo HOM05D006857 ORTHO05D008679 4.9e-71 273.1 461 38.4
Aqoxy2G03746 Aquilegia oxysepala HOM05D006857 ORTHO05D008679 1.1e-70 271.9 467 37.9
QL06p021004 Quercus lobata HOM05D006857 ORTHO05D008679 1.1e-70 271.9 461 39.0
CiPaw.02G107000 Carya illinoinensis HOM05D006857 ORTHO05D008679 1.4e-70 271.6 461 38.0
Atru.chr4.1915 Acer truncatum HOM05D006857 ORTHO05D008679 1.9e-70 271.2 447 40.5
Migut.G00555 Erythranthe guttata HOM05D006857 ORTHO05D008679 2.4e-70 270.8 456 37.5
FAN17G2805 Fragaria x ananassa HOM05D006857 ORTHO05D008679 3.2e-70 270.4 454 36.8
Nitab4.5_0013063g0010 Nicotiana tabacum HOM05D006857 ORTHO05D008679 5.4e-70 269.6 453 38.0
Sed0022275 Sechium edule HOM05D006857 ORTHO05D008679 5.4e-70 269.6 401 41.6
Aqoxy7G02302 Aquilegia oxysepala HOM05D006857 ORTHO05D008679 7.0e-70 269.2 467 37.7
TWI09G0838 Tripterygium wilfordii HOM05D006857 ORTHO05D008679 7.0e-70 269.2 447 39.1
CsaV3_3G011690 Cucumis sativus L. HOM05D006857 ORTHO05D008679 9.2e-70 268.9 456 38.6
CSS0034732 Camellia sinensis var. sinensis HOM05D006857 ORTHO05D008679 2.0e-69 267.7 452 37.2
Aqoxy7G02465 Aquilegia oxysepala HOM05D006857 ORTHO05D008679 2.7e-69 267.3 467 37.7
Gohir.D10G158400 Gossypium hirsutum HOM05D006857 ORTHO05D008679 3.5e-69 266.9 450 39.1
Gorai.011G177900 Gossypium raimondii HOM05D006857 ORTHO05D008679 4.6e-69 266.5 450 39.1
PSO017G4333 Papaver somniferum HOM05D006857 ORTHO05D008679 4.6e-69 266.5 439 38.5
PGR031G1141 Punica granatum HOM05D006857 ORTHO05D008679 6.0e-69 266.2 464 37.3
PGR031G1585 Punica granatum HOM05D006857 ORTHO05D008679 6.0e-69 266.2 464 37.3
Sopen09g033630 Solanum pennellii HOM05D006857 ORTHO05D008679 1.7e-68 264.6 452 37.6
PGSC0003DMG400017145 Solanum tuberosum HOM05D006857 ORTHO05D008679 3.0e-68 263.8 453 38.2
Hund20529 Selenicereus undatus HOM05D006857 ORTHO05D008679 3.9e-68 263.5 449 36.3
Solyc09g090690.4 Solanum lycopersicum HOM05D006857 ORTHO05D008679 3.9e-68 263.5 452 37.6
ClCG05G004000 Citrullus lanatus HOM05D006857 ORTHO05D008679 5.0e-68 263.1 454 37.9
COL.COLO4_15963 Corchorus olitorius HOM05D006857 ORTHO05D008679 5.0e-68 263.1 411 40.4
PSO063G2784 Papaver somniferum HOM05D006857 ORTHO05D008679 5.0e-68 263.1 439 38.5
Duzib151G0230 Durio zibethinus HOM05D006857 ORTHO05D008679 8.6e-68 262.3 456 37.1
AUR62015271 Chenopodium quinoa HOM05D006857 ORTHO05D008679 1.5e-67 261.5 474 35.9
Nitab4.5_0000194g0200 Nicotiana tabacum HOM05D006857 ORTHO05D008679 1.5e-67 261.5 457 37.0
Sabra08G0131200 Salix brachista HOM05D006857 ORTHO05D008679 3.3e-67 260.4 454 37.0
Ah.04g153670 Amaranthus hybridus HOM05D006857 ORTHO05D008679 5.6e-67 259.6 450 38.0
Cpa.g.sc44.1 Carica papaya HOM05D006857 ORTHO05D008679 5.6e-67 259.6 446 36.8
Lj6g0000537 Lotus japonicus HOM05D006857 ORTHO05D008679 5.6e-67 259.6 436 38.1
THA.LOC104804575 Tarenaya hassleriana HOM05D006857 ORTHO05D008679 7.3e-67 259.2 464 36.6
CAN.G524.29 Capsicum annuum HOM05D006857 ORTHO05D008679 9.5e-67 258.8 457 36.5
Ciclev10005032m.g Citrus clementina HOM05D006857 ORTHO05D008679 1.6e-66 258.1 449 38.8
Sp7g10880 Schrenkiella parvula HOM05D006857 ORTHO05D008679 2.1e-66 257.7 464 34.5
Zm00001eb077400 Zea mays HOM05D006857 ORTHO05D008679 2.1e-66 257.7 440 37.7
Lsat_1_v5_gn_2_41360 Lactuca sativa HOM05D006857 ORTHO05D008679 2.8e-66 257.3 442 37.6
Manes.03G158900 Manihot esculenta HOM05D006857 ORTHO05D008679 2.8e-66 257.3 448 37.7
Thhalv10026810m.g Eutrema salsugineum HOM05D006857 ORTHO05D008679 3.6e-66 256.9 474 35.4
Thecc.04G264000 Theobroma cacao HOM05D006857 ORTHO05D008679 6.2e-66 256.1 460 36.1
CARHR218870 Cardamine hirsuta HOM05D006857 ORTHO05D008679 1.1e-65 255.4 408 38.5
Os04g0510700 Oryza sativa ssp. japonica HOM05D006857 ORTHO05D008679 1.1e-65 255.4 450 38.7
GSVIVG01027915001 Vitis vinifera HOM05D006857 ORTHO05D008679 1.1e-65 255.4 449 37.9
HanXRQChr06g0182801 Helianthus annuus HOM05D006857 ORTHO05D008679 2.3e-65 254.2 441 36.7
AT4G13330 Arabidopsis thaliana HOM05D006857 ORTHO05D008679 3.1e-65 253.8 444 36.0
MELO3C006377.2 Cucumis melo HOM05D006857 ORTHO05D008679 1.2e-64 251.9 472 36.7
C06p17330 Brassica napus HOM05D006857 ORTHO05D008679 2.6e-64 250.8 465 33.8
BolC6t36929H Brassica oleracea HOM05D006857 ORTHO05D008679 2.6e-64 250.8 465 33.8
Sc19g0005530 Simmondsia chinensis HOM05D006857 ORTHO05D008679 3.4e-64 250.4 482 35.3
AL9U10380 Arabidopsis lyrata HOM05D006857 ORTHO05D008679 7.5e-64 249.2 448 35.5
AUR62018068 Chenopodium quinoa HOM05D006857 ORTHO05D008679 9.9e-64 248.8 422 37.2
Peaxi162Scf00153g01846 Petunia axillaris HOM05D006857 ORTHO05D008679 2.2e-63 247.7 441 37.0
Carub.0007s2931 Capsella rubella HOM05D006857 ORTHO05D008679 2.9e-63 247.3 397 38.3
SGA_v2.0_scaffold67G22686 Striga asiatica HOM05D006857 ORTHO05D008679 8.3e-63 245.7 456 36.2
BraA05t20557Z Brassica rapa HOM05D006857 ORTHO05D008679 1.4e-62 245.0 461 34.9
Eucgr.H00127 Eucalyptus grandis HOM05D006857 ORTHO05D008679 1.4e-62 245.0 418 39.0
A05p16520 Brassica napus HOM05D006857 ORTHO05D008679 3.2e-62 243.8 461 34.7
Aa31LG9G4440 Aethionema arabicum HOM05D006857 ORTHO05D008679 7.8e-61 239.2 388 38.1
ECA234G1558 Erigeron canadensis HOM05D006857 ORTHO05D005985 3.0e-60 237.3 406 37.7
AagrBONN_evm.TU.Sc2ySwM_117.1189 Anthoceros agrestis HOM05D006857 ORTHO05D008679 2.5e-59 234.2 298 44.3
SalBow3G1529 Salvia bowleyana HOM05D006857 ORTHO05D008679 3.6e-58 230.3 412 37.6
Phvul.007G231500 Phaseolus vulgaris HOM05D006857 ORTHO05D008679 8.1e-58 229.2 370 38.9
DCAR_002298 Daucus carota HOM05D004684 ORTHO05D006904 2.0e-56 224.6 312 41.7
MSTRG.4172 Avicennia marina HOM05D006857 ORTHO05D008679 1.3e-55 221.9 360 38.1
Hma1.2p1_0112F.1_g054740 Hydrangea macrophylla HOM05D006857 ORTHO05D008679 1.3e-55 221.9 367 39.5
Lj6C621T18 Lonicera japonica HOM05D006857 ORTHO05D008679 2.9e-55 220.7 561 31.4
CDE02G1483 Ceratophyllum demersum HOM05D006857 ORTHO05D008679 6.4e-55 219.5 456 32.9
Oeu002936.2 Olea europaea HOM05D006857 ORTHO05D008679 1.2e-50 205.3 458 32.5
TPR.G11804 Trifolium pratense HOM05D006857 ORTHO05D008679 1.5e-48 198.4 329 38.0
Dinv27112 Davidia involucrata HOM05D006857 ORTHO05D008679 5.3e-41 173.3 335 35.2
MBI10_g35430_MAGBIO Magnolia biondii HOM05D006857 ORTHO05D008679 2.2e-39 167.9 318 37.7
SHI00774 Sapria himalayana HOM05D006857 ORTHO05D008679 4.3e-35 153.7 291 39.2
BcaC08g44309 Brassica carinata HOM05D006857 ORTHO05D008679 7.4e-35 152.9 209 41.1
MBI10_g35433_MAGBIO Magnolia biondii HOM05D006857 ORTHO05D008679 2.7e-29 134.4 290 36.2
unitig_748.g8297 Utricularia gibba HOM05D006857 ORTHO05D008679 1.0e-20 105.9 179 36.3
unitig_748.g8298 Utricularia gibba HOM05D006857 ORTHO05D008679 3.3e-19 100.9 248 29.8
FvH4_5g26950 Fragaria vesca HOM05D006857 ORTHO05D008679 9.7e-19 99.4 97 51.5
CDE08G1596 Ceratophyllum demersum HOM05D006857 ORTHO05D008679 1.3e-18 99.0 196 33.2
BcaC08g44310 Brassica carinata HOM05D006857 ORTHO05D008679 3.7e-18 97.4 246 27.2
MBI10_g35434_MAGBIO Magnolia biondii HOM05D006857 ORTHO05D008679 4.8e-18 97.1 155 38.7
FAN13G3085 Fragaria x ananassa HOM05D006857 ORTHO05D008679 1.1e-17 95.9 97 51.5
SEGI_21065 Sequoiadendron giganteum HOM05D006857 ORTHO05D008679 1.6e-13 82.0 101 44.6
MCO09G143 Micromonas commoda HOM05D006857 ORTHO05D008679 1.4e-12 79.0 222 30.2
MCO07G483 Micromonas commoda HOM05D006857 ORTHO05D008679 4.1e-09 67.4 241 26.1
PRCOL_00005388 Prasinoderma coloniale HOM05D009988 ORTHO05D012160 8.5e-07 59.7 227 26.4


User provided reference genes

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