Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0126s0031 Marchantia polymorpha HOM05D007369 ORTHO05D009369 2.8e-255 884.8 448 100.0
AagrBONN_evm.TU.Sc2ySwM_362.2687 Anthoceros agrestis HOM05D007369 ORTHO05D009369 7.0e-65 252.3 479 36.7
ATR0706G035 Amborella trichopoda HOM05D007369 ORTHO05D009369 8.6e-63 245.4 384 42.4
TAR636G2558 Trochodendron aralioides HOM05D007369 ORTHO05D009369 9.8e-51 205.3 420 37.6
Dinv38329 Davidia involucrata HOM05D007369 ORTHO05D009369 9.8e-43 178.7 344 36.3
GSVIVG01017812001 Vitis vinifera HOM05D007369 ORTHO05D009369 5.4e-41 172.9 316 38.0
MBI19_g37517_MAGBIO Magnolia biondii HOM05D007369 ORTHO05D009369 2.3e-39 167.5 316 39.6
Nn3g21294 Nelumbo nucifera HOM05D007369 ORTHO05D009369 2.3e-39 167.5 330 35.5
CSS0015973 Camellia sinensis var. sinensis HOM05D007369 ORTHO05D009369 4.7e-37 159.8 356 35.1
Nn4g26033 Nelumbo nucifera HOM05D007369 ORTHO05D009369 1.1e-36 158.7 168 52.4
Aqoxy2G03087 Aquilegia oxysepala HOM05D007369 ORTHO05D009369 1.8e-36 157.9 330 34.5
Hma1.2p1_0078F.1_g040800 Hydrangea macrophylla HOM05D007369 ORTHO05D009369 2.3e-36 157.5 318 35.8
QL06p007318 Quercus lobata HOM05D007369 ORTHO05D009369 5.2e-36 156.4 322 34.5
Manes.03G190800 Manihot esculenta HOM05D007369 ORTHO05D009369 4.4e-35 153.3 335 36.1
Ciclev10005057m.g Citrus clementina HOM05D007369 ORTHO05D009369 8.3e-34 149.1 321 34.3
Glyma.13G214800 Glycine max HOM05D007369 ORTHO05D009369 7.1e-33 146.0 410 31.2
Actinidia40222 Actinidia chinensis HOM05D007369 ORTHO05D009369 9.2e-33 145.6 311 36.7
Thecc.04G277200 Theobroma cacao HOM05D007369 ORTHO05D009369 1.2e-32 145.2 373 32.4
Oeu044796.2 Olea europaea HOM05D007369 ORTHO05D009369 4.6e-32 143.3 336 31.8
Prupe.1G142600 Prunus persica HOM05D007369 ORTHO05D009369 4.6e-32 143.3 321 32.4
Rhsim04G0215900 Rhododendron simsii HOM05D007369 ORTHO05D009369 4.6e-32 143.3 319 34.5
MD13G1174200 Malus domestica HOM05D007369 ORTHO05D009369 1.3e-31 141.7 319 34.5
Duzib052G0382 Durio zibethinus HOM05D007369 ORTHO05D009369 2.3e-31 141.0 148 50.7
Nitab4.5_0003067g0040 Nicotiana tabacum HOM05D007369 ORTHO05D009369 8.6e-31 139.0 147 50.3
CiPaw.02G086900 Carya illinoinensis HOM05D007369 ORTHO05D009369 1.1e-30 138.7 314 33.4
Gohir.A09G061800 Gossypium hirsutum HOM05D007369 ORTHO05D009369 1.1e-30 138.7 143 51.7
Gohir.D09G060700 Gossypium hirsutum HOM05D007369 ORTHO05D009369 1.5e-30 138.3 143 52.4
RcHm_v2.0_Chr4g0420931 Rosa chinensis HOM05D007369 ORTHO05D009369 1.5e-30 138.3 338 33.4
TPR.G37368 Trifolium pratense HOM05D007369 ORTHO05D009369 1.9e-30 137.9 320 32.5
Pp3c20_17540 Physcomitrium patens HOM05D007369 ORTHO05D009369 2.5e-30 137.5 329 35.3
Solyc01g067700.3 Solanum lycopersicum HOM05D007369 ORTHO05D009369 2.5e-30 137.5 341 32.6
Potri.008G195300 Populus trichocarpa HOM05D007369 ORTHO05D009369 3.3e-30 137.1 326 33.7
Cfa015498 Carpinus fangiana HOM05D007369 ORTHO05D009369 5.6e-30 136.3 355 31.3
Oeu062882.1 Olea europaea HOM05D007369 ORTHO05D009369 5.6e-30 136.3 325 34.2
CAN.G223.8 Capsicum annuum HOM05D007369 ORTHO05D009369 7.3e-30 136.0 353 32.6
VMungo0540G1702 Vigna mungo HOM05D007369 ORTHO05D009369 1.6e-29 134.8 369 31.4
FAN17G0929 Fragaria x ananassa HOM05D007369 ORTHO05D009369 2.8e-29 134.0 315 34.3
Peaxi162Scf00386g00219 Petunia axillaris HOM05D007369 ORTHO05D009369 2.8e-29 134.0 302 33.4
Phvul.006G161000 Phaseolus vulgaris HOM05D007369 ORTHO05D009369 3.6e-29 133.7 323 32.8
Potri.010G031250 Populus trichocarpa HOM05D007369 ORTHO05D009369 4.7e-29 133.3 149 49.0
Sopen01g029630 Solanum pennellii HOM05D007369 ORTHO05D009369 6.2e-29 132.9 341 32.0
Gorai.006G075300 Gossypium raimondii HOM05D007369 ORTHO05D009369 1.4e-28 131.7 143 51.7
Glyma.15G098300 Glycine max HOM05D007369 ORTHO05D009369 4.0e-28 130.2 347 31.4
Manes.15G017400 Manihot esculenta HOM05D007369 ORTHO05D009369 5.2e-28 129.8 385 30.4
Cc03_g02400 Coffea canephora HOM05D007369 ORTHO05D009369 6.8e-28 129.4 350 33.1
Sabra08G0148500 Salix brachista HOM05D007369 ORTHO05D009369 8.9e-28 129.0 188 43.6
FvH4_4g17160 Fragaria vesca HOM05D007369 ORTHO05D009369 1.2e-27 128.6 312 33.7
FAN12G1425 Fragaria x ananassa HOM05D007369 ORTHO05D009369 1.2e-27 128.6 312 33.7
FAN12G3176 Fragaria x ananassa HOM05D007369 ORTHO05D009369 1.2e-27 128.6 312 33.7
FAN07G2486 Fragaria x ananassa HOM05D007369 ORTHO05D009369 1.5e-27 128.3 310 34.8
Psat1g187040 Pisum sativum HOM05D007369 ORTHO05D009369 9.9e-27 125.6 407 29.0
Migut.G00214 Erythranthe guttata HOM05D007369 ORTHO05D009369 1.7e-26 124.8 149 43.6
CsaV3_3G014100 Cucumis sativus L. HOM05D007369 ORTHO05D009369 3.8e-26 123.6 315 30.8
TWI73G1273 Tripterygium wilfordii HOM05D007369 ORTHO05D009369 8.4e-26 122.5 148 45.9
Medtr8g093650 Medicago truncatula HOM05D007369 ORTHO05D009369 1.9e-25 121.3 373 26.5
Actinidia23432 Actinidia chinensis HOM05D007369 ORTHO05D009369 2.4e-25 120.9 327 33.0
Sed0026345 Sechium edule HOM05D007369 ORTHO05D009369 2.1e-24 117.9 129 47.3
FAN17G3125 Fragaria x ananassa HOM05D007369 ORTHO05D009369 6.0e-24 116.3 122 51.6
Lalb_Chr18g0055751 Lupinus albus HOM05D007369 ORTHO05D009369 7.8e-24 115.9 339 32.2
SalBow2G2600 Salvia bowleyana HOM05D007369 ORTHO05D009369 1.0e-23 115.5 147 41.5
arahy.Tifrunner.gnm1.ann1.ED76E0 Arachis hypogaea HOM05D007369 ORTHO05D009369 3.0e-23 114.0 355 31.3
Eucgr.B01264 Eucalyptus grandis HOM05D007369 ORTHO05D009369 5.1e-23 113.2 140 43.6
arahy.Tifrunner.gnm1.ann1.IR05CW Arachis hypogaea HOM05D007369 ORTHO05D009369 8.7e-23 112.5 369 30.6
ClCG05G005770 Citrullus lanatus HOM05D007369 ORTHO05D009369 8.7e-23 112.5 312 29.5
CANSAT78G0356 Cannabis sativa HOM05D007369 ORTHO05D009369 1.9e-22 111.3 376 28.2
SGA_v2.0_scaffold57G20253 Striga asiatica HOM05D007369 ORTHO05D009369 1.6e-21 108.2 152 40.1
THA.LOC104820236 Tarenaya hassleriana HOM05D007369 ORTHO05D009369 4.8e-21 106.7 117 47.0
Atru.chr4.2749 Acer truncatum HOM05D007369 ORTHO05D009369 6.2e-21 106.3 98 53.1
Ca_00577_v3 Cicer arietinum L. HOM05D007369 ORTHO05D009369 6.2e-21 106.3 359 28.4
COL.COLO4_13933 Corchorus olitorius HOM05D007369 ORTHO05D009369 2.0e-19 101.3 159 39.6
ECA240G2128 Erigeron canadensis HOM05D007369 ORTHO05D009369 3.4e-19 100.5 310 29.7
SMO128G0001 Selaginella moellendorffii HOM05D002232 ORTHO05D002530 4.4e-19 100.1 240 35.0
Haze_01056 Corylus avellana HOM05D007369 ORTHO05D009369 5.8e-19 99.8 370 26.8
Nitab4.5_0000197g0120 Nicotiana tabacum HOM05D007369 ORTHO05D009369 7.6e-19 99.4 146 39.7
SMO351G0254 Selaginella moellendorffii HOM05D002232 ORTHO05D002530 2.2e-18 97.8 252 33.7
DCAR_002440 Daucus carota HOM05D007369 ORTHO05D009369 2.9e-18 97.4 318 28.0
Dinv44429 Davidia involucrata HOM05D007369 ORTHO05D009369 3.8e-18 97.1 285 28.4
Sc13g0003630 Simmondsia chinensis HOM05D007369 ORTHO05D009369 6.4e-18 96.3 289 30.4
HanXRQChr03g0080111 Helianthus annuus HOM05D007369 ORTHO05D009369 5.4e-17 93.2 159 40.3
SEGI_26846 Sequoiadendron giganteum HOM05D007369 ORTHO05D009369 2.7e-16 90.9 163 39.3
Ca_17638_v3 Cicer arietinum L. HOM05D007369 ORTHO05D009369 3.5e-16 90.5 387 27.6
FAN22G0049 Fragaria x ananassa HOM05D007369 ORTHO05D009369 1.0e-15 89.0 309 29.1
MD16G1175700 Malus domestica HOM05D007369 ORTHO05D009369 2.3e-15 87.8 86 52.3
Duzib151G0340 Durio zibethinus HOM05D007369 ORTHO05D009369 8.7e-15 85.9 373 26.3
LjContig00389g0017607 Lotus japonicus HOM05D007369 ORTHO05D009369 4.3e-14 83.6 274 30.3
vmacro08206 Vaccinium macrocarpon HOM05D007369 ORTHO05D009369 9.6e-14 82.4 137 40.1
MELO3C031713.2 Cucumis melo HOM05D007369 ORTHO05D009369 1.3e-13 82.0 150 34.7
Zm00001eb410560 Zea mays HOM05D007369 ORTHO05D009369 3.6e-13 80.5 188 31.9
Mapoly0008s0171 Marchantia polymorpha HOM05D007369 ORTHO05D009369 2.6e-11 74.3 136 35.3
CBR_g38889 Chara braunii HOM05D007369 ORTHO05D009369 2.2e-10 71.2 350 26.6


User provided reference genes

Program Settings