Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0124s0028 Marchantia polymorpha HOM05D006711 ORTHO05D008104 7.9e-39 163.3 83 100.0
CBR_g49624 Chara braunii HOM05D006711 ORTHO05D008104 1.1e-16 89.7 66 66.7
AagrBONN_evm.TU.Sc2ySwM_368.1224 Anthoceros agrestis HOM05D006711 ORTHO05D008104 2.5e-16 88.6 67 70.1
BcaC07g39289 Brassica carinata HOM05D006711 ORTHO05D008104 2.5e-16 88.6 67 68.7
A06p19610 Brassica napus HOM05D006711 ORTHO05D008104 2.5e-16 88.6 67 68.7
C08p22960 Brassica napus HOM05D006711 ORTHO05D008104 2.5e-16 88.6 67 68.7
BolC8t49933H Brassica oleracea HOM05D006711 ORTHO05D008104 2.5e-16 88.6 67 68.7
BraA06t25041Z Brassica rapa HOM05D006711 ORTHO05D008104 2.5e-16 88.6 67 68.7
Oeu047317.1 Olea europaea HOM05D006711 ORTHO05D008104 5.5e-16 87.4 69 62.3
BcaB01g00848 Brassica carinata HOM05D006711 ORTHO05D008104 7.2e-16 87.0 67 67.2
Ciclev10023110m.g Citrus clementina HOM05D006711 ORTHO05D008104 7.2e-16 87.0 76 61.8
Thhalv10010870m.g Eutrema salsugineum HOM05D006711 ORTHO05D008104 7.2e-16 87.0 67 67.2
Pp3c3_16770 Physcomitrium patens HOM05D006711 ORTHO05D008104 7.2e-16 87.0 72 63.9
Aa31LG4G16690 Aethionema arabicum HOM05D006711 ORTHO05D008104 9.4e-16 86.7 67 67.2
AL5G27360 Arabidopsis lyrata HOM05D006711 ORTHO05D008104 9.4e-16 86.7 67 67.2
EL10Ac5g10797 Beta vulgaris HOM05D006711 ORTHO05D008104 9.4e-16 86.7 74 62.2
CARHR156770 Cardamine hirsuta HOM05D006711 ORTHO05D008104 9.4e-16 86.7 67 67.2
Duzib084G0075 Durio zibethinus HOM05D006711 ORTHO05D008104 9.4e-16 86.7 69 65.2
Sp5g13950 Schrenkiella parvula HOM05D006711 ORTHO05D008104 9.4e-16 86.7 67 67.2
CsaV3_1G008300 Cucumis sativus L. HOM05D006711 ORTHO05D008104 1.6e-15 85.9 68 63.2
Manes.14G068400 Manihot esculenta HOM05D006711 ORTHO05D008104 1.6e-15 85.9 73 63.0
THA.LOC104821460 Tarenaya hassleriana HOM05D006711 ORTHO05D008104 1.6e-15 85.9 75 61.3
ATR1149G012 Amborella trichopoda HOM05D006711 ORTHO05D008104 2.1e-15 85.5 84 58.3
MBI15_g24174_MAGBIO Magnolia biondii HOM05D006711 ORTHO05D008104 2.1e-15 85.5 69 63.8
SalBow6G5258 Salvia bowleyana HOM05D006711 ORTHO05D008104 2.1e-15 85.5 69 63.8
CDE10G0118 Ceratophyllum demersum HOM05D001322 ORTHO05D001301 3.6e-15 84.7 82 54.9
DCAR_011220 Daucus carota HOM05D006711 ORTHO05D008104 3.6e-15 84.7 69 62.3
Duzib068G0631 Durio zibethinus HOM05D006711 ORTHO05D008104 3.6e-15 84.7 70 62.9
Aqoxy3G00948 Aquilegia oxysepala HOM05D006711 ORTHO05D008104 4.7e-15 84.3 79 57.0
MELO3C002246.2 Cucumis melo HOM05D006711 ORTHO05D008104 4.7e-15 84.3 68 61.8
Gohir.A12G275900 Gossypium hirsutum HOM05D006711 ORTHO05D008104 4.7e-15 84.3 69 63.8
Gohir.D12G276600 Gossypium hirsutum HOM05D006711 ORTHO05D008104 4.7e-15 84.3 69 63.8
Gorai.008G297100 Gossypium raimondii HOM05D006711 ORTHO05D008104 4.7e-15 84.3 69 63.8
PSO478G1559 Papaver somniferum HOM05D006711 ORTHO05D008104 4.7e-15 84.3 77 58.4
TWI15G0492 Tripterygium wilfordii HOM05D006711 ORTHO05D008104 4.7e-15 84.3 70 62.9
arahy.Tifrunner.gnm1.ann1.5NY27E Arachis hypogaea HOM05D006711 ORTHO05D008104 6.1e-15 84.0 69 62.3
ClCG01G014050 Citrullus lanatus HOM05D006711 ORTHO05D008104 6.1e-15 84.0 68 61.8
Aa31LG11G810 Aethionema arabicum HOM05D006711 ORTHO05D008104 8.0e-15 83.6 67 64.2
Eucgr.K02867 Eucalyptus grandis HOM05D006711 ORTHO05D008104 8.0e-15 83.6 67 64.2
Pp3c14_16830 Physcomitrium patens HOM05D006711 ORTHO05D008104 8.0e-15 83.6 68 63.2
Sabra12G0055800 Salix brachista HOM05D006711 ORTHO05D008104 8.0e-15 83.6 76 59.2
Sc04g0001970 Simmondsia chinensis HOM05D006711 ORTHO05D008104 8.0e-15 83.6 75 60.0
GSVIVG01007800001 Vitis vinifera HOM05D006711 ORTHO05D008104 8.0e-15 83.6 69 62.3
Actinidia33966 Actinidia chinensis HOM05D006711 ORTHO05D008104 1.0e-14 83.2 72 61.1
COL.COLO4_24770 Corchorus olitorius HOM05D006711 ORTHO05D008104 1.0e-14 83.2 68 63.2
Oeu059193.1 Olea europaea HOM05D006711 ORTHO05D008104 1.0e-14 83.2 69 60.9
PGR044G2080 Punica granatum HOM05D006711 ORTHO05D008104 1.0e-14 83.2 67 64.2
Thecc.03G007500 Theobroma cacao HOM05D006711 ORTHO05D008104 1.0e-14 83.2 69 63.8
AUR62031000 Chenopodium quinoa HOM05D006711 ORTHO05D008104 1.4e-14 82.8 68 63.2
Migut.N03365 Erythranthe guttata HOM05D006711 ORTHO05D008104 1.4e-14 82.8 69 60.9
Sabra15G0097500 Salix brachista HOM05D006711 ORTHO05D008104 1.4e-14 82.8 67 62.7
GSVIVG01032507001 Vitis vinifera HOM05D006711 ORTHO05D008104 1.4e-14 82.8 78 57.7
Carub.0005s1414 Capsella rubella HOM05D000086 ORTHO05D008104 1.8e-14 82.4 68 61.8
Cfa019085 Carpinus fangiana HOM05D006711 ORTHO05D008104 1.8e-14 82.4 67 64.2
Ah.10g035450 Amaranthus hybridus HOM05D006711 ORTHO05D008104 2.3e-14 82.0 68 64.7
CDE10G0426 Ceratophyllum demersum HOM05D006711 ORTHO05D008104 2.3e-14 82.0 69 58.0
Lj4g0001750 Lotus japonicus HOM05D006711 ORTHO05D008104 2.3e-14 82.0 66 65.2
Medtr4g106700 Medicago truncatula HOM05D006711 ORTHO05D008104 3.0e-14 81.6 67 64.2
PSO017G6527 Papaver somniferum HOM05D006711 ORTHO05D008104 3.0e-14 81.6 77 57.1
Peaxi162Scf00429g00118 Petunia axillaris HOM05D006711 ORTHO05D008104 3.0e-14 81.6 73 58.9
Potri.012G078000 Populus trichocarpa HOM05D006711 ORTHO05D008104 3.0e-14 81.6 67 62.7
Potri.015G073300 Populus trichocarpa HOM05D006711 ORTHO05D008104 3.0e-14 81.6 67 62.7
CANSAT11G1423 Cannabis sativa HOM05D006711 ORTHO05D008104 4.0e-14 81.3 67 62.7
Cc07_g02450 Coffea canephora HOM05D006711 ORTHO05D008104 4.0e-14 81.3 67 64.2
Psat4g057240 Pisum sativum HOM05D006711 ORTHO05D008104 4.0e-14 81.3 67 62.7
Ca_21901_v3 Cicer arietinum L. HOM05D006711 ORTHO05D008104 5.2e-14 80.9 67 64.2
FvH4_5g05020 Fragaria vesca HOM05D006711 ORTHO05D008104 5.2e-14 80.9 70 61.4
FAN04G0211 Fragaria x ananassa HOM05D006711 ORTHO05D008104 5.2e-14 80.9 70 61.4
FAN08G2471 Fragaria x ananassa HOM05D006711 ORTHO05D008104 5.2e-14 80.9 70 61.4
FAN13G1278 Fragaria x ananassa HOM05D006711 ORTHO05D008104 5.2e-14 80.9 70 61.4
FAN18G1479 Fragaria x ananassa HOM05D006711 ORTHO05D008104 5.2e-14 80.9 70 61.4
FAN18G2156 Fragaria x ananassa HOM05D006711 ORTHO05D008104 5.2e-14 80.9 70 61.4
Atru.chr9.2428 Acer truncatum HOM05D006711 ORTHO05D008104 6.8e-14 80.5 69 60.9
Cpa.g.sc134.10 Carica papaya HOM05D006711 ORTHO05D008104 6.8e-14 80.5 69 60.9
Sed0004980 Sechium edule HOM05D006711 ORTHO05D008104 6.8e-14 80.5 67 61.2
Hund09419 Selenicereus undatus HOM05D006711 ORTHO05D008104 6.8e-14 80.5 70 62.9
THA.LOC104798980 Tarenaya hassleriana HOM05D000086 ORTHO05D008104 6.8e-14 80.5 62 66.1
TPR.G37552 Trifolium pratense HOM05D006711 ORTHO05D008104 6.8e-14 80.5 73 58.9
vmacro05808 Vaccinium macrocarpon HOM05D006711 ORTHO05D008104 6.8e-14 80.5 74 58.1
Hma1.2p1_0697F.1_g204840 Hydrangea macrophylla HOM05D006711 ORTHO05D008104 8.8e-14 80.1 69 58.0
PSO063G1690 Papaver somniferum HOM05D006711 ORTHO05D008104 8.8e-14 80.1 68 60.3
PSO832G1815 Papaver somniferum HOM05D006711 ORTHO05D008104 8.8e-14 80.1 68 60.3
Eucgr.J02179 Eucalyptus grandis HOM05D006711 ORTHO05D008104 1.2e-13 79.7 72 54.2
HanXRQChr09g0265981 Helianthus annuus HOM05D006711 ORTHO05D008104 1.5e-13 79.3 82 56.1
CiPaw.11G029900 Carya illinoinensis HOM05D006711 ORTHO05D008104 2.0e-13 79.0 64 65.6
AUR62008246 Chenopodium quinoa HOM05D001451 ORTHO05D008104 2.0e-13 79.0 62 66.1
Lsat_1_v5_gn_4_181601 Lactuca sativa HOM05D006711 ORTHO05D008104 3.4e-13 78.2 75 60.0
Glyma.05G035600 Glycine max HOM05D006711 ORTHO05D008104 4.4e-13 77.8 62 64.5
Nitab4.5_0002792g0010 Nicotiana tabacum HOM05D006711 ORTHO05D008104 4.4e-13 77.8 67 58.2
Phvul.003G198200 Phaseolus vulgaris HOM05D006711 ORTHO05D008104 4.4e-13 77.8 62 64.5
PRCOL_00004863 Prasinoderma coloniale HOM05D006711 ORTHO05D008104 4.4e-13 77.8 68 60.3
CAN.G742.33 Capsicum annuum HOM05D006711 ORTHO05D008104 1.3e-12 76.3 67 58.2
Nitab4.5_0004762g0010 Nicotiana tabacum HOM05D006711 ORTHO05D008104 1.3e-12 76.3 67 56.7
MD06G1177900 Malus domestica HOM05D006711 ORTHO05D008104 1.7e-12 75.9 67 59.7
MD14G1184500 Malus domestica HOM05D006711 ORTHO05D008104 1.7e-12 75.9 67 59.7
Sopen11g029530 Solanum pennellii HOM05D006711 ORTHO05D008104 2.2e-12 75.5 73 53.4
HPP92_010905 Vanilla planifolia HOM05D006711 ORTHO05D008104 2.2e-12 75.5 69 58.0
HPP92_010907 Vanilla planifolia HOM05D006711 ORTHO05D008104 2.2e-12 75.5 69 58.0
CiPaw.12G024900 Carya illinoinensis HOM05D006711 ORTHO05D008104 2.8e-12 75.1 79 55.7
Os09g0375900 Oryza sativa ssp. japonica HOM05D006711 ORTHO05D008104 3.7e-12 74.7 73 54.8
Zm00001eb311470 Zea mays HOM05D006711 ORTHO05D008104 3.7e-12 74.7 63 60.3
Lalb_Chr12g0201501 Lupinus albus HOM05D006711 ORTHO05D008104 8.3e-12 73.6 61 62.3
Prupe.5G177100 Prunus persica HOM05D006711 ORTHO05D008104 8.3e-12 73.6 68 57.4
HanXRQChr12g0385511 Helianthus annuus HOM05D006711 ORTHO05D008104 3.1e-11 71.6 74 54.1
SEGI_30617 Sequoiadendron giganteum HOM05D006711 ORTHO05D008104 4.1e-11 71.2 68 51.5
Oeu006591.3 Olea europaea HOM05D006711 ORTHO05D008104 1.2e-10 69.7 92 45.7
RcHm_v2.0_Chr7g0194021 Rosa chinensis HOM05D006711 ORTHO05D008104 1.3e-09 66.2 68 55.9
unitig_46.g17997 Utricularia gibba HOM05D006711 ORTHO05D008104 1.7e-09 65.9 87 49.4
Haze_07479 Corylus avellana HOM05D006711 ORTHO05D008104 8.5e-09 63.5 50 66.0
QL10p013547 Quercus lobata HOM05D006711 ORTHO05D008104 8.5e-09 63.5 51 64.7
Rhsim08G0056600 Rhododendron simsii HOM05D000086 ORTHO05D000983 1.1e-08 63.2 52 59.6
Sed0016611 Sechium edule HOM05D006711 ORTHO05D008104 1.1e-08 63.2 67 50.7
CSS0024346 Camellia sinensis var. sinensis HOM05D006711 ORTHO05D008104 1.5e-08 62.8 52 61.5
ATR0820G148 Amborella trichopoda HOM05D006711 ORTHO05D008104 2.5e-08 62.0 83 47.0
Nn4g22854 Nelumbo nucifera HOM05D006711 ORTHO05D008104 3.2e-08 61.6 61 54.1
Rhsim10G0024900 Rhododendron simsii HOM05D006711 ORTHO05D008104 3.2e-08 61.6 81 45.7
Rhsim10G0024700 Rhododendron simsii HOM05D006711 ORTHO05D008104 1.2e-07 59.7 53 60.4
TAR622G0690 Trochodendron aralioides HOM05D001464 ORTHO05D002836 1.6e-07 59.3 53 58.5
ATR0661G003 Amborella trichopoda HOM05D006711 ORTHO05D008104 2.7e-07 58.5 85 44.7
PGSC0003DMG400003004 Solanum tuberosum HOM05D006711 ORTHO05D008104 4.7e-07 57.8 50 60.0


User provided reference genes

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