Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0122s0023 Marchantia polymorpha HOM05D006058 ORTHO05D007686 3.2e-96 355.1 184 100.0
Mapoly0068s0046 Marchantia polymorpha HOM05D006058 ORTHO05D007686 2.5e-45 186.0 132 69.7
Pp3c3_34830 Physcomitrium patens HOM05D006058 ORTHO05D007686 2.4e-43 179.5 159 58.5
AagrBONN_evm.TU.Sc2ySwM_369.269 Anthoceros agrestis HOM05D006058 ORTHO05D007686 2.0e-42 176.4 152 59.2
SMO244G0033 Selaginella moellendorffii HOM05D006058 ORTHO05D007686 5.5e-40 168.3 144 60.4
CBR_g26410 Chara braunii HOM05D006058 ORTHO05D007686 2.1e-36 156.4 122 60.7
SEGI_21939 Sequoiadendron giganteum HOM05D006058 ORTHO05D007686 1.4e-35 153.7 122 59.8
Rhsim13G0018500 Rhododendron simsii HOM05D003625 ORTHO05D004382 9.0e-35 151.0 120 56.7
Psat4g228760 Pisum sativum HOM05D006058 ORTHO05D007686 2.0e-34 149.8 118 60.2
MD04G1200100 Malus domestica HOM05D006058 ORTHO05D007686 2.6e-34 149.4 123 54.5
Peaxi162Scf00273g00034 Petunia axillaris HOM05D006058 ORTHO05D007686 2.6e-34 149.4 122 55.7
TAR636G0052 Trochodendron aralioides HOM05D006058 ORTHO05D007686 3.4e-34 149.1 123 55.3
Nitab4.5_0009592g0010 Nicotiana tabacum HOM05D006058 ORTHO05D007686 4.5e-34 148.7 122 54.9
FAN24G0575 Fragaria x ananassa HOM05D006058 ORTHO05D007686 5.8e-34 148.3 124 56.5
FAN27G3183 Fragaria x ananassa HOM05D006058 ORTHO05D007686 5.8e-34 148.3 124 56.5
Nitab4.5_0001499g0140 Nicotiana tabacum HOM05D006058 ORTHO05D007686 5.8e-34 148.3 122 55.7
DCAR_018372 Daucus carota HOM05D006058 ORTHO05D007686 1.0e-33 147.5 121 56.2
Manes.07G087200 Manihot esculenta HOM05D006058 ORTHO05D007686 1.0e-33 147.5 122 54.9
PSO170G2912 Papaver somniferum HOM05D006058 ORTHO05D007686 1.0e-33 147.5 122 53.3
PSO407G0089 Papaver somniferum HOM05D006058 ORTHO05D007686 1.0e-33 147.5 122 54.1
vmacro04594 Vaccinium macrocarpon HOM05D006058 ORTHO05D007686 1.0e-33 147.5 120 55.8
PGR119G2453 Punica granatum HOM05D006058 ORTHO05D007686 1.3e-33 147.1 118 55.1
CDE02G3716 Ceratophyllum demersum HOM05D006058 ORTHO05D007686 1.7e-33 146.7 120 57.5
CSS0022820 Camellia sinensis var. sinensis HOM05D006058 ORTHO05D007686 2.2e-33 146.4 120 54.2
COL.COLO4_08051 Corchorus olitorius HOM05D006058 ORTHO05D007686 2.2e-33 146.4 123 55.3
Ca_03230_v3 Cicer arietinum L. HOM05D006058 ORTHO05D007686 2.9e-33 146.0 121 57.0
FvH4_2g24470 Fragaria vesca HOM05D006058 ORTHO05D007686 2.9e-33 146.0 121 57.0
Nitab4.5_0004672g0030 Nicotiana tabacum HOM05D006058 ORTHO05D007686 2.9e-33 146.0 122 53.3
Prupe.8G268000 Prunus persica HOM05D006058 ORTHO05D007686 2.9e-33 146.0 119 53.8
vmacro02518 Vaccinium macrocarpon HOM05D006058 ORTHO05D007686 2.9e-33 146.0 120 55.0
Aqoxy4G03219 Aquilegia oxysepala HOM05D006058 ORTHO05D007686 3.8e-33 145.6 122 55.7
Duzib211G0114 Durio zibethinus HOM05D006058 ORTHO05D007686 3.8e-33 145.6 119 55.5
Eucgr.H01614 Eucalyptus grandis HOM05D006058 ORTHO05D007686 5.0e-33 145.2 122 52.5
AT5G63690 Arabidopsis thaliana HOM05D006058 ORTHO05D007686 1.1e-32 144.1 131 52.7
MELO3C015303.2 Cucumis melo HOM05D006058 ORTHO05D007686 1.1e-32 144.1 120 57.5
CsaV3_1G038790 Cucumis sativus L. HOM05D006058 ORTHO05D007686 1.1e-32 144.1 120 57.5
Sc26g0003460 Simmondsia chinensis HOM05D006058 ORTHO05D007686 1.1e-32 144.1 120 53.3
SGA_v2.0_scaffold130G34295 Striga asiatica HOM05D006058 ORTHO05D007686 1.1e-32 144.1 131 50.4
Lj2g0026207 Lotus japonicus HOM05D006058 ORTHO05D007686 1.4e-32 143.7 120 56.7
RcHm_v2.0_Chr6g0292311 Rosa chinensis HOM05D006058 ORTHO05D007686 1.4e-32 143.7 120 54.2
CANSAT25G3509 Cannabis sativa HOM05D006058 ORTHO05D007686 1.9e-32 143.3 121 52.9
Glyma.01G089000 Glycine max HOM05D006058 ORTHO05D007686 1.9e-32 143.3 120 55.0
Glyma.04G146600 Glycine max HOM05D006058 ORTHO05D007686 1.9e-32 143.3 120 55.0
Nn4g26080 Nelumbo nucifera HOM05D006058 ORTHO05D007686 2.5e-32 142.9 118 54.2
Thecc.01G288100 Theobroma cacao HOM05D006058 ORTHO05D007686 2.5e-32 142.9 118 54.2
Actinidia00707 Actinidia chinensis HOM05D006058 ORTHO05D007686 3.2e-32 142.5 120 52.5
BcaC03g18221 Brassica carinata HOM05D006058 ORTHO05D007686 4.2e-32 142.1 131 50.4
Peaxi162Scf00026g00313 Petunia axillaris HOM05D006058 ORTHO05D007686 4.2e-32 142.1 122 54.1
Zm00001eb106990 Zea mays HOM05D006058 ORTHO05D007686 4.2e-32 142.1 125 54.4
arahy.Tifrunner.gnm1.ann1.SHER6S Arachis hypogaea HOM05D006058 ORTHO05D007686 5.5e-32 141.7 122 54.1
CiPaw.07G098200 Carya illinoinensis HOM05D006058 ORTHO05D007686 5.5e-32 141.7 120 54.2
MD12G1212600 Malus domestica HOM05D006058 ORTHO05D007686 5.5e-32 141.7 123 52.0
arahy.Tifrunner.gnm1.ann1.Y2QWLJ Arachis hypogaea HOM05D006058 ORTHO05D007686 7.2e-32 141.4 120 55.0
BcaB07g29701 Brassica carinata HOM05D006058 ORTHO05D007686 7.2e-32 141.4 131 51.9
Sp2g26790 Schrenkiella parvula HOM05D006058 ORTHO05D007686 7.2e-32 141.4 121 53.7
BolC2t12363H Brassica oleracea HOM05D006058 ORTHO05D007686 9.3e-32 141.0 131 50.4
A06p30300 Brassica napus HOM05D006058 ORTHO05D007686 1.2e-31 140.6 133 52.6
BraA06t25979Z Brassica rapa HOM05D006058 ORTHO05D007686 1.2e-31 140.6 133 53.4
Medtr3g010210 Medicago truncatula HOM05D006058 ORTHO05D007686 1.2e-31 140.6 118 56.8
Oeu032852.1 Olea europaea HOM05D006058 ORTHO05D007686 1.2e-31 140.6 129 50.4
Phvul.002G050500 Phaseolus vulgaris HOM05D006058 ORTHO05D007686 1.2e-31 140.6 120 56.7
BcaB02g09737 Brassica carinata HOM05D006058 ORTHO05D007686 1.6e-31 140.2 133 51.9
AUR62036672 Chenopodium quinoa HOM05D006058 ORTHO05D007686 1.6e-31 140.2 119 56.3
GSVIVG01011025001 Vitis vinifera HOM05D006058 ORTHO05D007686 2.1e-31 139.8 118 55.1
C02p62900 Brassica napus HOM05D006058 ORTHO05D007686 2.7e-31 139.4 126 50.8
BolC3t18529H Brassica oleracea HOM05D006058 ORTHO05D007686 3.5e-31 139.0 131 52.7
Sopen12g005770 Solanum pennellii HOM05D006058 ORTHO05D007686 3.5e-31 139.0 134 49.3
TPR.G8807 Trifolium pratense HOM05D006058 ORTHO05D007686 3.5e-31 139.0 118 53.4
unitig_0.g1187 Utricularia gibba HOM05D006058 ORTHO05D007686 3.5e-31 139.0 118 54.2
BcaC01g02630 Brassica carinata HOM05D006058 ORTHO05D007686 4.6e-31 138.7 131 52.7
C03p62750 Brassica napus HOM05D006058 ORTHO05D007686 4.6e-31 138.7 131 52.7
Hma1.2p1_0399F.1_g144340 Hydrangea macrophylla HOM05D006058 ORTHO05D007686 4.6e-31 138.7 130 50.0
PGSC0003DMG400015370 Solanum tuberosum HOM05D006058 ORTHO05D007686 4.6e-31 138.7 134 49.3
Cfa006057 Carpinus fangiana HOM05D006058 ORTHO05D007686 7.9e-31 137.9 121 53.7
Gohir.A12G007700 Gossypium hirsutum HOM05D006058 ORTHO05D007686 7.9e-31 137.9 112 54.5
HanXRQChr15g0476421 Helianthus annuus HOM05D006058 ORTHO05D007686 7.9e-31 137.9 119 56.3
Hma1.2p1_1049F.1_g251900 Hydrangea macrophylla HOM05D006058 ORTHO05D007686 7.9e-31 137.9 130 50.0
Solyc12g014020.2 Solanum lycopersicum HOM05D006058 ORTHO05D007686 7.9e-31 137.9 126 50.8
TPR.G16722 Trifolium pratense HOM05D006058 ORTHO05D007686 7.9e-31 137.9 118 54.2
AL8G40840 Arabidopsis lyrata HOM05D006058 ORTHO05D007686 1.3e-30 137.1 131 51.9
A02p42950 Brassica napus HOM05D006058 ORTHO05D007686 1.3e-30 137.1 131 50.4
Carub.0008s2446 Capsella rubella HOM05D006058 ORTHO05D007686 1.3e-30 137.1 131 51.1
TPR.G22635 Trifolium pratense HOM05D006058 ORTHO05D007686 1.3e-30 137.1 117 55.6
Atru.chr5.1299 Acer truncatum HOM05D006058 ORTHO05D007686 1.8e-30 136.7 120 52.5
CAN.G964.10 Capsicum annuum HOM05D006058 ORTHO05D007686 1.8e-30 136.7 129 51.9
Gohir.D12G007100 Gossypium hirsutum HOM05D006058 ORTHO05D007686 1.8e-30 136.7 112 53.6
Gorai.008G007300 Gossypium raimondii HOM05D006058 ORTHO05D007686 1.8e-30 136.7 112 53.6
Lju470C11T9 Lonicera japonica HOM05D006058 ORTHO05D007686 1.8e-30 136.7 125 48.8
Sabra02G0198900 Salix brachista HOM05D006058 ORTHO05D007686 1.8e-30 136.7 120 53.3
VMungo1215G3318 Vigna mungo HOM05D006058 ORTHO05D007686 1.8e-30 136.7 123 52.8
Ciclev10022776m.g Citrus clementina HOM05D006058 ORTHO05D007686 3.0e-30 136.0 119 51.3
Lalb_Chr07g0187491 Lupinus albus HOM05D006058 ORTHO05D007686 3.0e-30 136.0 120 52.5
MBI07_g41269_MAGBIO Magnolia biondii HOM05D006058 ORTHO05D007686 3.0e-30 136.0 120 51.7
THA.LOC104826323 Tarenaya hassleriana HOM05D006058 ORTHO05D007686 3.0e-30 136.0 121 53.7
CARHR277600 Cardamine hirsuta HOM05D006058 ORTHO05D007686 3.9e-30 135.6 122 54.1
Prupe.3G123100 Prunus persica HOM05D006058 ORTHO05D007686 3.9e-30 135.6 119 52.9
Hund02088 Selenicereus undatus HOM05D006058 ORTHO05D007686 5.1e-30 135.2 118 50.8
CBR_g24266 Chara braunii HOM05D006058 ORTHO05D007686 6.7e-30 134.8 123 55.3
HanXRQChr03g0093951 Helianthus annuus HOM05D006058 ORTHO05D007686 6.7e-30 134.8 118 51.7
QL12p042454 Quercus lobata HOM05D006058 ORTHO05D007686 6.7e-30 134.8 121 52.1
BraA02t09218Z Brassica rapa HOM05D006058 ORTHO05D007686 8.7e-30 134.4 126 50.8
SHI14488 Sapria himalayana HOM05D006058 ORTHO05D007686 8.7e-30 134.4 124 51.6
Potri.014G083500 Populus trichocarpa HOM05D006058 ORTHO05D007686 1.1e-29 134.0 116 51.7
TWI23G1093 Tripterygium wilfordii HOM05D006058 ORTHO05D007686 1.1e-29 134.0 120 50.8
HPP92_016068 Vanilla planifolia HOM05D006058 ORTHO05D007686 1.5e-29 133.7 120 51.7
Aa31LG10G11090 Aethionema arabicum HOM05D006058 ORTHO05D007686 1.9e-29 133.3 119 52.1
Ah.10g033440 Amaranthus hybridus HOM05D006058 ORTHO05D007686 1.9e-29 133.3 120 51.7
ECA240G0292 Erigeron canadensis HOM05D006058 ORTHO05D007686 1.9e-29 133.3 118 51.7
Hund29081 Selenicereus undatus HOM05D006058 ORTHO05D007686 5.7e-29 131.7 118 48.3
Hund29083 Selenicereus undatus HOM05D006058 ORTHO05D007686 5.7e-29 131.7 118 48.3
Thhalv10005102m.g Eutrema salsugineum HOM05D006058 ORTHO05D007686 9.7e-29 131.0 122 53.3
Cc01_g20070 Coffea canephora HOM05D006058 ORTHO05D007686 1.3e-28 130.6 118 50.8
Prupe.8G250400 Prunus persica HOM05D006058 ORTHO05D007686 6.3e-28 128.3 91 60.4
Nn3g21231 Nelumbo nucifera HOM05D006058 ORTHO05D007686 3.1e-27 125.9 82 69.5
ATR0225G019 Amborella trichopoda HOM05D006058 ORTHO05D007686 6.9e-27 124.8 106 56.6
Sed0020474 Sechium edule HOM05D006058 ORTHO05D007686 1.5e-26 123.6 85 64.7
SalBow3G0902 Salvia bowleyana HOM05D006058 ORTHO05D007686 2.0e-26 123.2 109 49.5
ClCG03G017360 Citrullus lanatus HOM05D006058 ORTHO05D007686 2.6e-26 122.9 83 65.1
Manes.10G061700 Manihot esculenta HOM05D006058 ORTHO05D007686 1.7e-25 120.2 114 51.8
Migut.D00240 Erythranthe guttata HOM05D006058 ORTHO05D007686 3.2e-24 115.9 124 45.2
Eucgr.H01617 Eucalyptus grandis HOM05D006058 ORTHO05D007686 8.8e-22 107.8 116 43.1
BolC4t22707H Brassica oleracea HOM05D006058 ORTHO05D007686 2.5e-21 106.3 85 56.5
EL10Ac7g17168 Beta vulgaris HOM05D006058 ORTHO05D007686 1.3e-20 104.0 118 41.5
AUR62034597 Chenopodium quinoa HOM05D006058 ORTHO05D007686 1.3e-20 104.0 98 53.1
TAR365G0318 Trochodendron aralioides HOM05D006058 ORTHO05D007686 1.7e-20 103.6 69 60.9
EL10Ac3g06921 Beta vulgaris HOM05D006058 ORTHO05D007686 9.1e-19 97.8 92 51.1
Sc05g0004330 Simmondsia chinensis HOM05D006058 ORTHO05D007686 1.7e-17 93.6 81 51.9
Aa31LG1G18150 Aethionema arabicum HOM05D000706 ORTHO05D001554 3.2e-16 89.4 67 58.2
MBI07_g41268_MAGBIO Magnolia biondii HOM05D002731 ORTHO05D003073 1.7e-12 77.0 77 46.8
vmacro09159 Vaccinium macrocarpon HOM05D006058 ORTHO05D007686 9.1e-11 71.2 64 50.0
QL12p023442 Quercus lobata HOM05D006058 ORTHO05D007686 4.7e-07 58.9 85 38.8


User provided reference genes

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