Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0120s0016 Marchantia polymorpha HOM05D000809 ORTHO05D007735 4.6e-82 307.8 146 100.0
Mapoly0200s0003 Marchantia polymorpha HOM05D000809 ORTHO05D007735 5.1e-41 171.4 140 67.1
Pp3c18_10900 Physcomitrium patens HOM05D000809 ORTHO05D007735 1.2e-26 123.6 140 48.6
AagrBONN_evm.TU.Sc2ySwM_228.4030 Anthoceros agrestis HOM05D000809 ORTHO05D007735 3.7e-23 112.1 122 49.2
SMO351G0428 Selaginella moellendorffii HOM05D000809 ORTHO05D007735 1.1e-19 100.5 140 42.9
TAR365G0495 Trochodendron aralioides HOM05D000809 ORTHO05D007735 2.5e-19 99.4 122 47.5
CSS0007694 Camellia sinensis var. sinensis HOM05D000809 ORTHO05D007735 1.2e-18 97.1 122 45.1
CSS0013115 Camellia sinensis var. sinensis HOM05D000809 ORTHO05D007735 1.6e-18 96.7 122 45.1
Aqoxy5G00305 Aquilegia oxysepala HOM05D000809 ORTHO05D007735 2.7e-18 95.9 138 42.0
Cc01_g18660 Coffea canephora HOM05D000809 ORTHO05D007735 2.3e-17 92.8 118 44.9
HPP92_013588 Vanilla planifolia HOM05D000809 ORTHO05D007735 6.7e-17 91.3 122 44.3
CAN.G771.19 Capsicum annuum HOM05D000809 ORTHO05D007735 8.8e-17 90.9 122 43.4
TWI12G0549 Tripterygium wilfordii HOM05D000809 ORTHO05D007735 1.1e-16 90.5 122 41.0
Lj2A1156T48 Lonicera japonica HOM05D000809 ORTHO05D007735 2.6e-16 89.4 122 41.8
Nitab4.5_0001044g0150 Nicotiana tabacum HOM05D000809 ORTHO05D007735 2.6e-16 89.4 122 42.6
Solyc06g083990.3 Solanum lycopersicum HOM05D000809 ORTHO05D007735 2.6e-16 89.4 122 42.6
Sopen06g035380 Solanum pennellii HOM05D000809 ORTHO05D007735 2.6e-16 89.4 122 42.6
ATR0665G343 Amborella trichopoda HOM05D000809 ORTHO05D007735 3.3e-16 89.0 107 48.6
Nn3g19549 Nelumbo nucifera HOM05D000809 ORTHO05D007735 3.3e-16 89.0 137 41.6
Medtr1g070360 Medicago truncatula HOM05D000809 ORTHO05D007735 4.4e-16 88.6 107 47.7
ECA248G3003 Erigeron canadensis HOM05D000809 ORTHO05D007735 7.4e-16 87.8 127 42.5
Psat6g056240 Pisum sativum HOM05D000809 ORTHO05D007735 7.4e-16 87.8 107 47.7
Sed0013800 Sechium edule HOM05D000809 ORTHO05D007735 7.4e-16 87.8 118 43.2
Lj5A346T16 Lonicera japonica HOM05D000809 ORTHO05D007735 9.7e-16 87.4 122 41.8
PSO210G6413 Papaver somniferum HOM05D000809 ORTHO05D007735 9.7e-16 87.4 122 43.4
VMungo0720G1163 Vigna mungo HOM05D000809 ORTHO05D007735 9.7e-16 87.4 107 45.8
ClCG07G000690 Citrullus lanatus HOM05D000809 ORTHO05D007735 1.3e-15 87.0 112 43.8
Lsat_1_v5_gn_5_186520 Lactuca sativa HOM05D000809 ORTHO05D007735 1.3e-15 87.0 129 41.1
TPR.G9053 Trifolium pratense HOM05D000809 ORTHO05D007735 1.3e-15 87.0 107 46.7
Phvul.007G178700 Phaseolus vulgaris HOM05D000809 ORTHO05D007735 1.7e-15 86.7 107 45.8
TAR636G0452 Trochodendron aralioides HOM05D000809 ORTHO05D007735 1.7e-15 86.7 118 44.9
PSO832G2272 Papaver somniferum HOM05D000809 ORTHO05D007735 2.2e-15 86.3 122 43.4
PGSC0003DMG400020142 Solanum tuberosum HOM05D000809 ORTHO05D007735 2.2e-15 86.3 122 41.8
CBR_g8372 Chara braunii HOM05D000809 ORTHO05D007735 3.7e-15 85.5 131 41.2
Rhsim13G0031900 Rhododendron simsii HOM05D000809 ORTHO05D007735 4.8e-15 85.1 122 40.2
COL.COLO4_08270 Corchorus olitorius HOM05D000809 ORTHO05D007735 6.3e-15 84.7 122 42.6
Eucgr.B01526 Eucalyptus grandis HOM05D000809 ORTHO05D007735 6.3e-15 84.7 107 43.9
MELO3C014336.2 Cucumis melo HOM05D000809 ORTHO05D007735 8.2e-15 84.3 118 41.5
Thecc.01G264600 Theobroma cacao HOM05D000809 ORTHO05D007735 8.2e-15 84.3 122 42.6
GSVIVG01000762001 Vitis vinifera HOM05D000809 ORTHO05D007735 8.2e-15 84.3 112 42.0
Glyma.10G034100 Glycine max HOM05D000809 ORTHO05D007735 1.4e-14 83.6 107 43.9
FvH4_2g22230 Fragaria vesca HOM05D000809 ORTHO05D007735 2.4e-14 82.8 137 38.0
FAN24G2288 Fragaria x ananassa HOM05D000809 ORTHO05D007735 2.4e-14 82.8 137 38.0
FAN27G0496 Fragaria x ananassa HOM05D000809 ORTHO05D007735 2.4e-14 82.8 137 38.0
HanXRQChr11g0336671 Helianthus annuus HOM05D000809 ORTHO05D007735 2.4e-14 82.8 118 41.5
Prupe.8G229700 Prunus persica HOM05D000809 ORTHO05D007735 2.4e-14 82.8 122 41.0
CANSAT01G1378 Cannabis sativa HOM05D000809 ORTHO05D007735 3.1e-14 82.4 122 41.0
Duzib133G1201 Durio zibethinus HOM05D000809 ORTHO05D007735 3.1e-14 82.4 122 40.2
Gohir.A08G060900 Gossypium hirsutum HOM05D000809 ORTHO05D007735 3.1e-14 82.4 122 41.0
MD10G1190700 Malus domestica HOM05D000809 ORTHO05D007735 3.1e-14 82.4 118 39.8
PGR031G2014 Punica granatum HOM05D000809 ORTHO05D007735 3.1e-14 82.4 112 42.0
arahy.Tifrunner.gnm1.ann1.2C7EET Arachis hypogaea HOM05D000809 ORTHO05D007735 4.1e-14 82.0 107 43.9
arahy.Tifrunner.gnm1.ann1.T0T3KN Arachis hypogaea HOM05D000809 ORTHO05D007735 4.1e-14 82.0 107 43.9
CsaV3_6G036790 Cucumis sativus L. HOM05D000809 ORTHO05D007735 4.1e-14 82.0 118 40.7
Duzib138G0205 Durio zibethinus HOM05D000809 ORTHO05D007735 4.1e-14 82.0 107 44.9
Gorai.004G073900 Gossypium raimondii HOM05D000809 ORTHO05D007735 4.1e-14 82.0 122 41.0
MD05G1203400 Malus domestica HOM05D000809 ORTHO05D007735 4.1e-14 82.0 122 38.5
Cfa002347 Carpinus fangiana HOM05D000809 ORTHO05D007735 5.3e-14 81.6 103 43.7
Migut.D00395 Erythranthe guttata HOM05D000809 ORTHO05D007735 5.3e-14 81.6 122 41.8
DCAR_019439 Daucus carota HOM05D000809 ORTHO05D007735 7.0e-14 81.3 118 40.7
RcHm_v2.0_Chr6g0289151 Rosa chinensis HOM05D000809 ORTHO05D007735 7.0e-14 81.3 122 40.2
Glyma.13G120300 Glycine max HOM05D000809 ORTHO05D007735 9.1e-14 80.9 107 43.0
Potri.005G220500 Populus trichocarpa HOM05D000809 ORTHO05D007735 9.1e-14 80.9 107 44.9
Sc17g0000830 Simmondsia chinensis HOM05D006365 ORTHO05D007893 9.1e-14 80.9 118 39.8
Ciclev10021421m.g Citrus clementina HOM05D000809 ORTHO05D007735 1.2e-13 80.5 107 40.2
Ca_09701_v3 Cicer arietinum L. HOM05D006365 ORTHO05D007893 1.6e-13 80.1 110 43.6
FAN15G3720 Fragaria x ananassa HOM05D000809 ORTHO05D007735 1.6e-13 80.1 137 37.2
Lalb_Chr02g0142341 Lupinus albus HOM05D000809 ORTHO05D007735 1.6e-13 80.1 107 43.0
Lj5g0009043 Lotus japonicus HOM05D000809 ORTHO05D007735 2.6e-13 79.3 107 43.0
MSTRG.21505 Avicennia marina HOM05D000809 ORTHO05D007735 4.5e-13 78.6 122 39.3
vmacro02636 Vaccinium macrocarpon HOM05D000809 ORTHO05D007735 4.5e-13 78.6 133 36.1
Manes.01G200200 Manihot esculenta HOM05D000809 ORTHO05D007735 1.3e-12 77.0 100 44.0
SGA_v2.0_scaffold138G35256 Striga asiatica HOM05D000809 ORTHO05D007735 1.7e-12 76.6 122 40.2
CiPaw.04G183400 Carya illinoinensis HOM05D000809 ORTHO05D007735 2.2e-12 76.3 103 41.7
Sabra05G0169200 Salix brachista HOM05D000809 ORTHO05D007735 2.2e-12 76.3 107 43.0
unitig_0.g148 Utricularia gibba HOM05D000809 ORTHO05D007735 2.2e-12 76.3 122 38.5
Potri.002G042600 Populus trichocarpa HOM05D000809 ORTHO05D007735 3.8e-12 75.5 107 41.1
Cpa.g.sc114.64 Carica papaya HOM05D000809 ORTHO05D007735 5.0e-12 75.1 103 42.7
AL7G34590 Arabidopsis lyrata HOM05D000809 ORTHO05D007735 2.5e-11 72.8 103 40.8
THA.LOC104812897 Tarenaya hassleriana HOM05D000809 ORTHO05D007735 3.2e-11 72.4 107 40.2
EL10Ac5g10446 Beta vulgaris HOM05D000809 ORTHO05D007735 4.2e-11 72.0 122 37.7
Aa31LG6G2130 Aethionema arabicum HOM05D000809 ORTHO05D007735 5.5e-11 71.6 103 40.8
A01p11440 Brassica napus HOM05D000809 ORTHO05D007735 5.5e-11 71.6 103 39.8
AT4G19540 Arabidopsis thaliana HOM05D000809 ORTHO05D007735 9.4e-11 70.9 103 39.8
CARHR226340 Cardamine hirsuta HOM05D000809 ORTHO05D007735 9.4e-11 70.9 103 39.8
Actinidia16111 Actinidia chinensis HOM05D000809 ORTHO05D007735 1.2e-10 70.5 80 43.8
BcaNung01773 Brassica carinata HOM05D000005 ORTHO05D011295 1.2e-10 70.5 103 38.8
A08p14390 Brassica napus HOM05D000809 ORTHO05D007735 1.2e-10 70.5 103 38.8
Carub.0007s2166 Capsella rubella HOM05D000809 ORTHO05D007735 1.2e-10 70.5 103 39.8
Thhalv10025776m.g Eutrema salsugineum HOM05D000809 ORTHO05D007735 1.6e-10 70.1 103 39.8
Atru.chr5.1607 Acer truncatum HOM05D000809 ORTHO05D007735 2.7e-10 69.3 103 35.9
BcaC09g51399 Brassica carinata HOM05D000809 ORTHO05D007735 2.7e-10 69.3 103 38.8
BraA01t01090Z Brassica rapa HOM05D000809 ORTHO05D007735 2.7e-10 69.3 103 38.8
C01p13510 Brassica napus HOM05D000809 ORTHO05D007735 3.6e-10 68.9 103 39.8
C03p82080 Brassica napus HOM05D000809 ORTHO05D007735 3.6e-10 68.9 103 38.8
BolC1t01323H Brassica oleracea HOM05D000809 ORTHO05D007735 3.6e-10 68.9 103 39.8
BraA08t33429Z Brassica rapa HOM05D000809 ORTHO05D007735 3.6e-10 68.9 103 38.8
AUR62011918 Chenopodium quinoa HOM05D000809 ORTHO05D007735 3.6e-10 68.9 103 39.8
AUR62032233 Chenopodium quinoa HOM05D000809 ORTHO05D007735 3.6e-10 68.9 103 39.8
BcaB03g11629 Brassica carinata HOM05D000809 ORTHO05D007735 4.7e-10 68.6 103 38.8
BcaC01g00620 Brassica carinata HOM05D000809 ORTHO05D007735 4.7e-10 68.6 103 38.8
BolC3t20487H Brassica oleracea HOM05D000809 ORTHO05D007735 4.7e-10 68.6 103 38.8
Hund09579 Selenicereus undatus HOM05D000809 ORTHO05D007735 6.1e-10 68.2 118 37.3
Sp7g18120 Schrenkiella parvula HOM05D000809 ORTHO05D007735 1.0e-09 67.4 103 37.9
Zm00001eb051140 Zea mays HOM05D000809 ORTHO05D007735 1.0e-09 67.4 79 46.8
Cre10.g427050 Chlamydomonas reinhardtii HOM05D000809 ORTHO05D007735 1.4e-09 67.0 122 33.6
Nitab4.5_0006433g0050 Nicotiana tabacum HOM05D000809 ORTHO05D007735 1.4e-09 67.0 79 45.6
Dinv19134 Davidia involucrata HOM05D000809 ORTHO05D007735 1.5e-08 63.5 118 34.7
PRCOL_00002169 Prasinoderma coloniale HOM05D000809 ORTHO05D007735 2.0e-08 63.2 133 31.6
Peaxi162Scf01530g00020 Petunia axillaris HOM05D000809 ORTHO05D007735 3.3e-08 62.4 76 42.1
SalBow4G2145 Salvia bowleyana HOM05D000809 ORTHO05D007735 3.3e-08 62.4 88 42.0
C03p73580 Brassica napus HOM05D000809 ORTHO05D007735 5.7e-08 61.6 99 37.4
Oeu040445.1 Olea europaea HOM05D000809 ORTHO05D007735 5.7e-08 61.6 76 42.1
Haze_24556 Corylus avellana HOM05D000809 ORTHO05D007735 1.3e-07 60.5 78 43.6


User provided reference genes

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