Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0118s0035 Marchantia polymorpha HOM05D018237 ORTHO05D019651 9.8e-248 859.8 458 100.0
SMO302G0039 Selaginella moellendorffii HOM05D018237 ORTHO05D019651 5.1e-79 299.3 439 44.6
Pp3c12_7440 Physcomitrium patens HOM05D018237 ORTHO05D019651 3.7e-77 293.1 525 39.6
SEGI_00591 Sequoiadendron giganteum HOM05D018237 ORTHO05D019651 1.2e-75 288.1 431 41.1
Pp3c4_13570 Physcomitrium patens HOM05D018237 ORTHO05D019651 1.5e-75 287.7 544 35.7
Pp3c3_16720 Physcomitrium patens HOM05D018237 ORTHO05D019651 2.5e-73 280.4 502 39.0
AagrBONN_evm.TU.Sc2ySwM_344.4769 Anthoceros agrestis HOM05D018237 ORTHO05D019651 1.4e-65 254.6 648 33.0
AagrBONN_evm.TU.Sc2ySwM_228.2712 Anthoceros agrestis HOM05D000948 ORTHO05D002102 3.7e-21 107.1 177 44.6
Mapoly0001s0248 Marchantia polymorpha HOM05D000948 ORTHO05D002102 3.1e-20 104.0 198 38.9
SEGI_23734 Sequoiadendron giganteum HOM05D000948 ORTHO05D002138 2.3e-18 97.8 193 36.3
SEGI_15006 Sequoiadendron giganteum HOM05D000948 ORTHO05D002138 6.6e-18 96.3 193 33.2
ATR0602G064 Amborella trichopoda HOM05D000948 ORTHO05D002102 5.6e-17 93.2 165 37.0
Actinidia20241 Actinidia chinensis HOM05D000948 ORTHO05D002102 7.3e-17 92.8 217 31.8
TAR375G0802 Trochodendron aralioides HOM05D000948 ORTHO05D002102 4.7e-16 90.1 213 32.9
TAR375G0965 Trochodendron aralioides HOM05D000948 ORTHO05D002102 4.7e-16 90.1 213 32.9
MBI06_g08475_MAGBIO Magnolia biondii HOM05D000948 ORTHO05D002102 6.1e-16 89.7 208 32.2
Rhsim07G0004300 Rhododendron simsii HOM05D000948 ORTHO05D002102 8.0e-16 89.4 194 33.0
vmacro13160 Vaccinium macrocarpon HOM05D000948 ORTHO05D002102 4.0e-15 87.0 194 32.0
Peaxi162Scf00786g00014 Petunia axillaris HOM05D000948 ORTHO05D002138 2.0e-14 84.7 213 30.5
CSS0027934 Camellia sinensis var. sinensis HOM05D000328 ORTHO05D000191 3.4e-14 84.0 194 33.5
Eucgr.D02375 Eucalyptus grandis HOM05D000948 ORTHO05D002102 5.8e-14 83.2 194 33.0
Pp3c9_7130 Physcomitrium patens HOM05D000948 ORTHO05D002138 5.8e-14 83.2 205 31.2
SalBow5G1876 Salvia bowleyana HOM05D000948 ORTHO05D002102 5.8e-14 83.2 194 33.0
Cpa.g.sc96.14 Carica papaya HOM05D000948 ORTHO05D002102 7.5e-14 82.8 206 32.0
QL04p060904 Quercus lobata HOM05D000948 ORTHO05D002102 7.5e-14 82.8 199 32.2
Pp3c15_12130 Physcomitrium patens HOM05D000948 ORTHO05D002102 9.8e-14 82.4 207 30.0
Cfa003803 Carpinus fangiana HOM05D000948 ORTHO05D002102 1.3e-13 82.0 198 31.8
Lj1g0001462 Lotus japonicus HOM05D000948 ORTHO05D002102 1.3e-13 82.0 195 34.4
GSVIVG01027123001 Vitis vinifera HOM05D000948 ORTHO05D002102 1.7e-13 81.6 215 31.6
Duzib138G1291 Durio zibethinus HOM05D000948 ORTHO05D002138 3.7e-13 80.5 194 32.0
unitig_8.g4779 Utricularia gibba HOM05D000948 ORTHO05D002102 3.7e-13 80.5 156 35.3
Oeu008697.1 Olea europaea HOM05D000948 ORTHO05D002102 8.3e-13 79.3 200 30.0
CAN.G986.3 Capsicum annuum HOM05D000948 ORTHO05D002138 1.1e-12 79.0 207 29.5
Prupe.2G188300 Prunus persica HOM05D000948 ORTHO05D002102 1.4e-12 78.6 216 30.6
Migut.N01543 Erythranthe guttata HOM05D000948 ORTHO05D002138 1.9e-12 78.2 212 29.7
Solyc01g095920.4 Solanum lycopersicum HOM05D000948 ORTHO05D002102 1.9e-12 78.2 162 32.7
TPR.G4796 Trifolium pratense HOM05D000948 ORTHO05D002102 2.4e-12 77.8 196 31.1
GSVIVG01036302001 Vitis vinifera HOM05D000948 ORTHO05D002102 2.4e-12 77.8 195 27.7
Haze_15653 Corylus avellana HOM05D000948 ORTHO05D002102 3.2e-12 77.4 198 31.3
Lalb_Chr18g0044461 Lupinus albus HOM05D000948 ORTHO05D002102 3.2e-12 77.4 164 37.2
PGSC0003DMG400000225 Solanum tuberosum HOM05D000948 ORTHO05D002138 3.2e-12 77.4 200 29.5
Cc02_g39360 Coffea canephora HOM05D000948 ORTHO05D002102 4.1e-12 77.0 157 34.4
Sopen01g039650 Solanum pennellii HOM05D000948 ORTHO05D002102 5.4e-12 76.6 162 32.7
Thecc.01G342700 Theobroma cacao HOM05D000948 ORTHO05D002138 7.0e-12 76.3 194 30.4
CAN.G72.18 Capsicum annuum HOM05D000948 ORTHO05D002102 9.2e-12 75.9 153 34.6
DCAR_014069 Daucus carota HOM05D001790 ORTHO05D007425 9.2e-12 75.9 213 29.1
Dinv35117 Davidia involucrata HOM05D000948 ORTHO05D002102 9.2e-12 75.9 204 30.4
Cc10_g08670 Coffea canephora HOM05D000948 ORTHO05D002138 1.2e-11 75.5 223 33.2
CiPaw.01G076300 Carya illinoinensis HOM05D000948 ORTHO05D002102 1.6e-11 75.1 198 31.8
Nitab4.5_0000213g0150 Nicotiana tabacum HOM05D000948 ORTHO05D002102 2.7e-11 74.3 214 31.3
COL.COLO4_06288 Corchorus olitorius HOM05D000328 ORTHO05D000191 6.0e-11 73.2 216 30.1
Medtr7g117380 Medicago truncatula HOM05D000948 ORTHO05D002102 1.0e-10 72.4 220 29.1
Thecc.08G178000 Theobroma cacao HOM05D000948 ORTHO05D002102 1.3e-10 72.0 199 31.2
Manes.02G207809 Manihot esculenta HOM05D000948 ORTHO05D002102 2.3e-10 71.2 217 27.2
Phvul.006G113200 Phaseolus vulgaris HOM05D000948 ORTHO05D002138 3.0e-10 70.9 193 29.5
RcHm_v2.0_Chr1g0359471 Rosa chinensis HOM05D000948 ORTHO05D002102 3.0e-10 70.9 168 33.3
Nitab4.5_0005989g0050 Nicotiana tabacum HOM05D000948 ORTHO05D002102 3.9e-10 70.5 153 32.0
TWI59G0248 Tripterygium wilfordii HOM05D000948 ORTHO05D002102 3.9e-10 70.5 225 28.9
Glyma.16G024400 Glycine max HOM05D000948 ORTHO05D002102 8.6e-10 69.3 199 30.7
Nitab4.5_0002326g0130 Nicotiana tabacum HOM05D000948 ORTHO05D002102 8.6e-10 69.3 163 30.7
Sabra14G0072400 Salix brachista HOM05D000948 ORTHO05D002102 8.6e-10 69.3 157 30.6
SEGI_06904 Sequoiadendron giganteum HOM05D000948 ORTHO05D002102 8.6e-10 69.3 193 30.1
Cfa008080 Carpinus fangiana HOM05D000948 ORTHO05D002102 1.1e-09 68.9 215 31.2
MD10G1005000 Malus domestica HOM05D000948 ORTHO05D002102 1.1e-09 68.9 214 28.5
Manes.02G201000 Manihot esculenta HOM05D000948 ORTHO05D002102 1.5e-09 68.6 217 26.3
SGA_v2.0_scaffold43G16351 Striga asiatica HOM05D000948 ORTHO05D002138 1.9e-09 68.2 212 31.6
Ciclev10023319m.g Citrus clementina HOM05D000948 ORTHO05D002102 2.5e-09 67.8 196 31.6
DCAR_001169 Daucus carota HOM05D000001 ORTHO05D000424 2.5e-09 67.8 187 28.3
Prupe.8G007800 Prunus persica HOM05D000948 ORTHO05D002102 3.3e-09 67.4 207 28.5
Haze_13954 Corylus avellana HOM05D000948 ORTHO05D002102 9.5e-09 65.9 212 32.5
Glyma.07G055700 Glycine max HOM05D000948 ORTHO05D002102 9.5e-09 65.9 198 29.8
Manes.02G201351 Manihot esculenta HOM05D000948 ORTHO05D002102 9.5e-09 65.9 174 28.7
Potri.014G098800 Populus trichocarpa HOM05D000948 ORTHO05D002102 1.2e-08 65.5 201 28.4
MD01G1080700 Malus domestica HOM05D000948 ORTHO05D002138 2.1e-08 64.7 153 32.7
Os08g0110600 Oryza sativa ssp. japonica HOM05D000948 ORTHO05D002102 2.1e-08 64.7 142 33.8
FAN27G0206 Fragaria x ananassa HOM05D000948 ORTHO05D002102 2.8e-08 64.3 210 29.5
Mapoly0030s0078 Marchantia polymorpha HOM05D000832 ORTHO05D031242 2.8e-08 64.3 87 40.2
CANSAT56G2570 Cannabis sativa HOM05D000948 ORTHO05D002138 3.6e-08 63.9 208 29.3
HPP92_000508 Vanilla planifolia HOM05D000948 ORTHO05D002102 3.6e-08 63.9 135 33.3
Atru.chr5.670 Acer truncatum HOM05D000948 ORTHO05D002102 4.7e-08 63.5 226 28.3
FAN20G0058 Fragaria x ananassa HOM05D000948 ORTHO05D002102 4.7e-08 63.5 224 28.6
Phvul.010G114300 Phaseolus vulgaris HOM05D000948 ORTHO05D002102 4.7e-08 63.5 228 29.4
RcHm_v2.0_Chr6g0251271 Rosa chinensis HOM05D000948 ORTHO05D002102 6.2e-08 63.2 219 29.7
FAN15G1264 Fragaria x ananassa HOM05D000948 ORTHO05D002102 1.1e-07 62.4 224 28.6
COL.COLO4_06912 Corchorus olitorius HOM05D000948 ORTHO05D002138 1.4e-07 62.0 182 29.1
TWI18G1076 Tripterygium wilfordii HOM05D000948 ORTHO05D002102 1.4e-07 62.0 124 34.7
FAN24G0387 Fragaria x ananassa HOM05D000948 ORTHO05D002102 1.8e-07 61.6 218 27.5
Manes.02G221660 Manihot esculenta HOM05D000948 ORTHO05D002102 1.8e-07 61.6 208 26.0
DCAR_010101 Daucus carota HOM05D000948 ORTHO05D002138 2.3e-07 61.2 156 29.5
FvH4_2g00920 Fragaria vesca HOM05D000948 ORTHO05D002102 8.9e-07 59.3 224 27.2
Lj7A500G121 Lonicera japonica HOM05D000328 ORTHO05D000191 1.5e-06 58.5 117 35.0
Nitab4.5_0012404g0010 Nicotiana tabacum HOM05D000948 ORTHO05D002102 3.4e-06 57.4 178 32.0
Hma1.2p1_0295F.1_g116760 Hydrangea macrophylla HOM05D000948 ORTHO05D002102 4.4e-06 57.0 149 32.9


User provided reference genes

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