Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0118s0023 Marchantia polymorpha HOM05D004215 ORTHO05D018306 5.6e-209 730.7 373 100.0
AagrBONN_evm.TU.Sc2ySwM_228.585 Anthoceros agrestis HOM05D004215 ORTHO05D018306 1.7e-96 357.1 302 55.0
Pp3c20_8810 Physcomitrium patens HOM05D004215 ORTHO05D018306 6.4e-88 328.6 357 46.8
SEGI_37569 Sequoiadendron giganteum HOM05D004215 ORTHO05D018306 1.6e-78 297.4 288 49.7
CBR_g8311 Chara braunii HOM05D004215 ORTHO05D018306 4.5e-65 252.7 332 42.5
SMO356G0347 Selaginella moellendorffii HOM05D004215 ORTHO05D018306 4.6e-46 189.5 159 55.3
Cre01.g005950 Chlamydomonas reinhardtii HOM05D004215 ORTHO05D018306 9.4e-39 165.2 271 36.9
PRCOL_00003073 Prasinoderma coloniale HOM05D004215 ORTHO05D018306 6.3e-27 125.9 279 32.6
CANSAT01G2004 Cannabis sativa HOM05D004215 ORTHO05D005293 4.0e-21 106.7 271 28.8
Aa31LG1G20 Aethionema arabicum HOM05D004215 ORTHO05D005293 1.3e-19 101.7 306 27.8
Glyma.10G267000 Glycine max HOM05D004215 ORTHO05D005293 1.3e-19 101.7 270 28.1
Migut.E00397 Erythranthe guttata HOM05D004215 ORTHO05D005293 3.7e-19 100.1 270 27.8
Lsat_1_v5_gn_8_41661 Lactuca sativa HOM05D004215 ORTHO05D005293 1.1e-18 98.6 271 28.8
Sed0020304 Sechium edule HOM05D004215 ORTHO05D005293 1.8e-18 97.8 274 28.5
AagrBONN_evm.TU.Sc2ySwM_228.3165 Anthoceros agrestis HOM05D004215 ORTHO05D005293 2.4e-18 97.4 270 27.0
CSS0000916 Camellia sinensis var. sinensis HOM05D004215 ORTHO05D005293 4.1e-18 96.7 271 29.2
Potri.008G126700 Populus trichocarpa HOM05D004215 ORTHO05D005293 5.3e-18 96.3 271 27.7
CSS0048780 Camellia sinensis var. sinensis HOM05D004215 ORTHO05D005293 7.0e-18 95.9 267 28.5
ClCG05G022300 Citrullus lanatus HOM05D004215 ORTHO05D005293 7.0e-18 95.9 271 26.2
ECA233G2791 Erigeron canadensis HOM05D004215 ORTHO05D005293 7.0e-18 95.9 271 28.8
unitig_699.g19481 Utricularia gibba HOM05D004215 ORTHO05D005293 7.0e-18 95.9 272 27.2
Dinv16170 Davidia involucrata HOM05D004215 ORTHO05D005293 1.2e-17 95.1 270 28.1
Actinidia31987 Actinidia chinensis HOM05D004215 ORTHO05D005293 1.6e-17 94.7 271 28.4
MSTRG.13568 Avicennia marina HOM05D004215 ORTHO05D005293 1.6e-17 94.7 272 27.2
EL10Ac6g14267 Beta vulgaris HOM05D004215 ORTHO05D005293 1.6e-17 94.7 237 29.1
HanXRQChr15g0466211 Helianthus annuus HOM05D004215 ORTHO05D005293 1.6e-17 94.7 271 28.0
arahy.Tifrunner.gnm1.ann1.BMT3C6 Arachis hypogaea HOM05D004215 ORTHO05D005293 2.7e-17 94.0 270 26.7
CARHR015680 Cardamine hirsuta HOM05D004215 ORTHO05D005293 2.7e-17 94.0 306 26.1
Ciclev10016124m.g Citrus clementina HOM05D004215 ORTHO05D005293 2.7e-17 94.0 268 26.5
arahy.Tifrunner.gnm1.ann1.IPKA5V Arachis hypogaea HOM05D004215 ORTHO05D005293 3.5e-17 93.6 270 26.7
Sp1g13480 Schrenkiella parvula HOM05D004215 ORTHO05D005293 3.5e-17 93.6 263 28.9
MELO3C012293.2 Cucumis melo HOM05D004215 ORTHO05D005293 5.9e-17 92.8 271 25.5
Thhalv10008333m.g Eutrema salsugineum HOM05D004215 ORTHO05D005293 5.9e-17 92.8 306 26.8
Lj5g0023519 Lotus japonicus HOM05D004215 ORTHO05D005293 5.9e-17 92.8 270 25.2
PGR119G1032 Punica granatum HOM05D004215 ORTHO05D005293 5.9e-17 92.8 239 28.0
Hund25007 Selenicereus undatus HOM05D004215 ORTHO05D005293 5.9e-17 92.8 271 27.3
CsaV3_5G034820 Cucumis sativus L. HOM05D004215 ORTHO05D005293 7.7e-17 92.4 271 25.8
Rhsim09G0069000 Rhododendron simsii HOM05D004215 ORTHO05D005293 7.7e-17 92.4 270 28.1
Lj3A876G45 Lonicera japonica HOM05D004215 ORTHO05D005293 1.0e-16 92.0 283 26.9
Solyc05g008450.3 Solanum lycopersicum HOM05D004215 ORTHO05D005293 1.0e-16 92.0 275 28.7
Sopen05g004280 Solanum pennellii HOM05D004215 ORTHO05D005293 1.0e-16 92.0 275 29.1
VMungo0720G1296 Vigna mungo HOM05D004215 ORTHO05D005293 1.0e-16 92.0 270 26.7
Atru.chr11.354 Acer truncatum HOM05D004215 ORTHO05D005293 1.3e-16 91.7 271 26.6
Eucgr.B02879 Eucalyptus grandis HOM05D004215 ORTHO05D005293 1.3e-16 91.7 270 26.7
Sc14g0007220 Simmondsia chinensis HOM05D004215 ORTHO05D005293 1.3e-16 91.7 270 25.9
CAN.G1489.9 Capsicum annuum HOM05D004215 ORTHO05D005293 1.7e-16 91.3 238 29.8
CiPaw.06G014700 Carya illinoinensis HOM05D004215 ORTHO05D005293 1.7e-16 91.3 281 26.7
Peaxi162Scf00205g00925 Petunia axillaris HOM05D004215 ORTHO05D005293 1.7e-16 91.3 275 28.4
Phvul.007G035000 Phaseolus vulgaris HOM05D004215 ORTHO05D005293 1.7e-16 91.3 270 27.0
PGR102G1684 Punica granatum HOM05D004215 ORTHO05D005293 1.7e-16 91.3 254 28.3
SEGI_29541 Sequoiadendron giganteum HOM05D004215 ORTHO05D005293 1.7e-16 91.3 280 26.8
Nitab4.5_0000293g0040 Nicotiana tabacum HOM05D004215 ORTHO05D005293 2.2e-16 90.9 237 30.4
HPP92_021849 Vanilla planifolia HOM05D004215 ORTHO05D005293 2.2e-16 90.9 267 27.3
BcaC05g25445 Brassica carinata HOM05D004215 ORTHO05D005293 2.9e-16 90.5 307 27.4
C05p13270 Brassica napus HOM05D004215 ORTHO05D005293 2.9e-16 90.5 307 27.4
BolC5t30064H Brassica oleracea HOM05D004215 ORTHO05D005293 2.9e-16 90.5 307 27.4
Migut.L00828 Erythranthe guttata HOM05D004215 ORTHO05D005293 3.8e-16 90.1 269 28.6
THA.LOC104805048 Tarenaya hassleriana HOM05D004215 ORTHO05D005293 3.8e-16 90.1 271 28.0
A06p11150 Brassica napus HOM05D004215 ORTHO05D005293 5.0e-16 89.7 269 27.9
BraA06t24295Z Brassica rapa HOM05D004215 ORTHO05D005293 5.0e-16 89.7 269 27.9
Psat6g222520 Pisum sativum HOM05D004215 ORTHO05D005293 5.0e-16 89.7 270 25.2
Potri.010G116500 Populus trichocarpa HOM05D004215 ORTHO05D005293 5.0e-16 89.7 266 27.1
RcHm_v2.0_Chr4g0433881 Rosa chinensis HOM05D004215 ORTHO05D005293 6.5e-16 89.4 274 26.6
DCAR_023619 Daucus carota HOM05D004215 ORTHO05D005293 8.5e-16 89.0 284 27.1
Migut.L00651 Erythranthe guttata HOM05D004215 ORTHO05D005293 1.1e-15 88.6 269 28.3
Medtr1g108710 Medicago truncatula HOM05D004215 ORTHO05D005293 1.1e-15 88.6 254 26.8
Lalb_Chr06g0165701 Lupinus albus HOM05D004215 ORTHO05D005293 1.5e-15 88.2 264 26.9
Mapoly0004s0030 Marchantia polymorpha HOM05D004215 ORTHO05D005293 1.5e-15 88.2 270 24.8
PGSC0003DMG400030559 Solanum tuberosum HOM05D004215 ORTHO05D005293 1.5e-15 88.2 275 28.7
AL1G27210 Arabidopsis lyrata HOM05D004215 ORTHO05D005293 1.9e-15 87.8 267 25.8
MSTRG.2195 Avicennia marina HOM05D004215 ORTHO05D005293 1.9e-15 87.8 261 28.4
BcaB03g13074 Brassica carinata HOM05D004215 ORTHO05D005293 1.9e-15 87.8 268 26.5
QL01p002798 Quercus lobata HOM05D004215 ORTHO05D005293 1.9e-15 87.8 255 27.5
Actinidia14939 Actinidia chinensis HOM05D004215 ORTHO05D005293 2.5e-15 87.4 270 27.0
Actinidia36693 Actinidia chinensis HOM05D004215 ORTHO05D005293 2.5e-15 87.4 270 27.0
BcaC07g38770 Brassica carinata HOM05D004215 ORTHO05D005293 2.5e-15 87.4 268 26.1
C08p17030 Brassica napus HOM05D004215 ORTHO05D005293 2.5e-15 87.4 268 26.1
CiPaw.05G246100 Carya illinoinensis HOM05D004215 ORTHO05D005293 3.2e-15 87.0 168 31.5
Manes.14G110200 Manihot esculenta HOM05D004215 ORTHO05D005293 3.2e-15 87.0 265 27.2
BolC8t49328H Brassica oleracea HOM05D004215 ORTHO05D005293 4.2e-15 86.7 268 25.7
Cpa.g.sc65.98 Carica papaya HOM05D004215 ORTHO05D005293 4.2e-15 86.7 271 26.9
Prupe.1G320800 Prunus persica HOM05D004215 ORTHO05D005293 4.2e-15 86.7 236 26.7
BcaB02g06582 Brassica carinata HOM05D004215 ORTHO05D005293 5.5e-15 86.3 160 32.5
A08p31720 Brassica napus HOM05D004215 ORTHO05D005293 5.5e-15 86.3 268 26.1
BraA08t35094Z Brassica rapa HOM05D004215 ORTHO05D005293 5.5e-15 86.3 268 26.1
CDE04G0818 Ceratophyllum demersum HOM05D004215 ORTHO05D005293 9.4e-15 85.5 174 30.5
COL.COLO4_15325 Corchorus olitorius HOM05D004215 ORTHO05D005293 1.2e-14 85.1 160 34.4
MD13G1031300 Malus domestica HOM05D004215 ORTHO05D005293 1.2e-14 85.1 270 24.8
TWI31G0297 Tripterygium wilfordii HOM05D004215 ORTHO05D005293 1.2e-14 85.1 271 26.9
DCAR_030188 Daucus carota HOM05D004215 ORTHO05D005293 1.6e-14 84.7 261 26.8
Carub.0001s1491 Capsella rubella HOM05D004215 ORTHO05D005293 2.1e-14 84.3 160 31.9
Cfa015796 Carpinus fangiana HOM05D004215 ORTHO05D005293 2.1e-14 84.3 160 31.9
PSO478G0614 Papaver somniferum HOM05D004215 ORTHO05D005293 2.1e-14 84.3 271 25.8
FvH4_4g26280 Fragaria vesca HOM05D004215 ORTHO05D005293 2.7e-14 84.0 274 25.9
FAN12G1757 Fragaria x ananassa HOM05D004215 ORTHO05D005293 2.7e-14 84.0 274 25.9
AT1G15140 Arabidopsis thaliana HOM05D004215 ORTHO05D005293 3.6e-14 83.6 267 25.1
FAN17G1658 Fragaria x ananassa HOM05D004215 ORTHO05D005293 3.6e-14 83.6 274 25.9
Gohir.D05G319000 Gossypium hirsutum HOM05D004215 ORTHO05D005293 3.6e-14 83.6 160 33.1
Gorai.009G341900 Gossypium raimondii HOM05D004215 ORTHO05D005293 3.6e-14 83.6 160 33.1
Sed0017516 Sechium edule HOM05D004215 ORTHO05D005293 3.6e-14 83.6 252 26.2
FAN12G4108 Fragaria x ananassa HOM05D004215 ORTHO05D005293 6.1e-14 82.8 274 25.9
PSO017G7108 Papaver somniferum HOM05D004215 ORTHO05D005293 8.0e-14 82.4 160 31.2
Pp3c16_22650 Physcomitrium patens HOM05D004215 ORTHO05D005293 8.0e-14 82.4 267 27.0
Duzib251G0621 Durio zibethinus HOM05D004215 ORTHO05D005293 1.4e-13 81.6 160 33.1
Lalb_Chr17g0338761 Lupinus albus HOM05D004215 ORTHO05D005293 1.4e-13 81.6 268 25.7
Thecc.02G217400 Theobroma cacao HOM05D004215 ORTHO05D005293 2.3e-13 80.9 271 25.8
Sabra10G0086200 Salix brachista HOM05D004215 ORTHO05D005293 4.0e-13 80.1 262 26.3
Sabra10G0087900 Salix brachista HOM05D004215 ORTHO05D005293 4.0e-13 80.1 262 26.3
AUR62014123 Chenopodium quinoa HOM05D004215 ORTHO05D005293 5.2e-13 79.7 256 25.4
TAR629G2922 Trochodendron aralioides HOM05D004215 ORTHO05D005293 5.2e-13 79.7 289 24.6
SMO174G0012 Selaginella moellendorffii HOM05D004215 ORTHO05D005293 8.8e-13 79.0 240 25.0
Oeu004319.1 Olea europaea HOM05D004215 ORTHO05D005293 1.2e-12 78.6 246 25.6
Aqoxy3G00166 Aquilegia oxysepala HOM05D004215 ORTHO05D005293 1.5e-12 78.2 131 32.1
Hma1.2p1_0114F.1_g055430 Hydrangea macrophylla HOM05D004215 ORTHO05D005293 2.0e-12 77.8 174 29.3
MD16G1033500 Malus domestica HOM05D004215 ORTHO05D005293 4.4e-12 76.6 270 24.1
Os02g0328300 Oryza sativa ssp. japonica HOM05D004215 ORTHO05D005293 1.3e-11 75.1 161 29.8
Nn4g24046 Nelumbo nucifera HOM05D004215 ORTHO05D005293 2.2e-11 74.3 221 27.6
Nitab4.5_0000350g0220 Nicotiana tabacum HOM05D004215 ORTHO05D005293 2.8e-11 73.9 237 28.7
Actinidia33607 Actinidia chinensis HOM05D004215 ORTHO05D005293 8.3e-11 72.4 160 28.8
SHI16315 Sapria himalayana HOM05D004215 ORTHO05D005293 1.8e-10 71.2 144 32.6
Haze_00697 Corylus avellana HOM05D004215 ORTHO05D005293 7.7e-09 65.9 128 32.8
MBI16_g21171_MAGBIO Magnolia biondii HOM05D004215 ORTHO05D005293 1.3e-08 65.1 169 29.0
Actinidia33606 Actinidia chinensis HOM05D004215 ORTHO05D005293 2.3e-08 64.3 130 30.0
Zm00001eb241500 Zea mays HOM05D004215 ORTHO05D005293 3.8e-08 63.5 222 28.8
Ca_23697_v3 Cicer arietinum L. HOM05D004215 ORTHO05D005293 3.3e-07 60.5 193 26.4


User provided reference genes

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