Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0118s0005 Marchantia polymorpha HOM05D002759 ORTHO05D003290 0.0e+00 4869.3 2457 100.0
Pp3c8_2900 Physcomitrium patens HOM05D002759 ORTHO05D003290 1.7e-311 1074.7 2515 32.2
AagrBONN_evm.TU.Sc2ySwM_117.1581 Anthoceros agrestis HOM05D002759 ORTHO05D003290 1.4e-300 1037.7 2539 31.7
SMO356G0583 Selaginella moellendorffii HOM05D002759 ORTHO05D003290 2.0e-185 655.2 1820 29.9
TAR381G0620 Trochodendron aralioides HOM05D002759 ORTHO05D003290 2.3e-173 615.1 2511 25.8
PSO528G0214 Papaver somniferum HOM05D002759 ORTHO05D003290 8.9e-170 603.2 2526 25.6
PSO170G2118 Papaver somniferum HOM05D002759 ORTHO05D003290 4.4e-169 600.9 2509 25.1
Aqoxy3G00692 Aquilegia oxysepala HOM05D002759 ORTHO05D003290 1.2e-163 582.8 2505 25.3
Nn5g28049 Nelumbo nucifera HOM05D002759 ORTHO05D003290 2.3e-162 578.6 2503 25.2
Ciclev10000008m.g Citrus clementina HOM05D002759 ORTHO05D003290 1.9e-159 568.9 2458 26.0
Duzib052G0069 Durio zibethinus HOM05D002759 ORTHO05D003290 5.4e-159 567.4 2295 25.3
TWI59G0497 Tripterygium wilfordii HOM05D002759 ORTHO05D003290 4.6e-158 564.3 2483 25.4
Actinidia39057 Actinidia chinensis HOM05D002759 ORTHO05D003290 1.3e-157 562.8 2476 25.5
Haze_21022 Corylus avellana HOM05D002759 ORTHO05D003290 1.7e-157 562.4 2504 24.7
Atru.chr6.1027 Acer truncatum HOM05D002759 ORTHO05D003290 2.5e-156 558.5 2292 25.5
Atru.chr6.1078 Acer truncatum HOM05D002759 ORTHO05D003290 2.8e-155 555.1 2293 25.6
Prupe.1G563000 Prunus persica HOM05D002759 ORTHO05D003290 1.8e-154 552.4 2452 25.2
arahy.Tifrunner.gnm1.ann1.YVTC7U Arachis hypogaea HOM05D002759 ORTHO05D003290 3.1e-154 551.6 2460 25.1
CANSAT11G0811 Cannabis sativa HOM05D002759 ORTHO05D003290 1.7e-152 545.8 2485 24.8
RcHm_v2.0_Chr7g0222331 Rosa chinensis HOM05D002759 ORTHO05D003290 2.2e-152 545.4 2494 25.0
DCAR_005626 Daucus carota HOM05D002759 ORTHO05D003290 4.9e-152 544.3 2495 24.0
Manes.07G013200 Manihot esculenta HOM05D002759 ORTHO05D003290 1.1e-151 543.1 2488 25.5
Psat1g219920 Pisum sativum HOM05D002759 ORTHO05D003290 1.4e-151 542.7 2483 24.9
arahy.Tifrunner.gnm1.ann1.VDG0KY Arachis hypogaea HOM05D002759 ORTHO05D003290 4.1e-151 541.2 2464 25.0
FvH4_3g35420 Fragaria vesca HOM05D002759 ORTHO05D003290 1.1e-148 533.1 2497 25.0
PGR042G2027 Punica granatum HOM05D002759 ORTHO05D003290 1.1e-148 533.1 2429 24.8
FAN16G3014 Fragaria x ananassa HOM05D002759 ORTHO05D003290 5.6e-148 530.8 2501 25.0
CAN.G1352.21 Capsicum annuum HOM05D002759 ORTHO05D003290 3.6e-147 528.1 2455 25.0
Potri.003G021700 Populus trichocarpa HOM05D002759 ORTHO05D003290 4.7e-147 527.7 2466 24.7
Rhsim11G0131800 Rhododendron simsii HOM05D002759 ORTHO05D003290 6.2e-147 527.3 2526 24.5
CiPaw.05G042600 Carya illinoinensis HOM05D002759 ORTHO05D003290 1.4e-146 526.2 2520 25.0
FAN11G2638 Fragaria x ananassa HOM05D002759 ORTHO05D003290 1.5e-145 522.7 2506 24.8
QL02p098685 Quercus lobata HOM05D002759 ORTHO05D003290 2.0e-145 522.3 2561 24.1
AT4G22970 Arabidopsis thaliana HOM05D002759 ORTHO05D003290 9.9e-145 520.0 2519 24.1
Thecc.02G041500 Theobroma cacao HOM05D002759 ORTHO05D003290 9.9e-145 520.0 2284 24.4
GSVIVG01023021001 Vitis vinifera HOM05D002759 ORTHO05D003290 1.4e-143 516.2 2332 25.0
ClCG08G010020 Citrullus lanatus HOM05D002759 ORTHO05D003290 1.2e-142 513.1 2498 24.3
Lsat_1_v5_gn_5_109460 Lactuca sativa HOM05D002759 ORTHO05D003290 4.6e-142 511.1 2486 23.6
Phvul.006G212401 Phaseolus vulgaris HOM05D002759 ORTHO05D003290 3.3e-140 505.0 2474 24.5
Lj6g0007416 Lotus japonicus HOM05D002759 ORTHO05D003290 9.6e-140 503.4 2462 24.1
Solyc01g104490.3 Solanum lycopersicum HOM05D002759 ORTHO05D003290 2.8e-139 501.9 2439 24.9
Sopen01g046990 Solanum pennellii HOM05D002759 ORTHO05D003290 3.6e-139 501.5 2435 24.7
Thhalv10024187m.g Eutrema salsugineum HOM05D002759 ORTHO05D003290 4.7e-139 501.1 2506 24.2
Sed0002146 Sechium edule HOM05D002759 ORTHO05D003290 2.4e-138 498.8 2488 24.7
C07p52320 Brassica napus HOM05D002759 ORTHO05D003290 1.2e-137 496.5 2521 24.0
Glyma.08G184200 Glycine max HOM05D002759 ORTHO05D003290 1.5e-137 496.1 2277 25.3
BolC1t01691H Brassica oleracea HOM05D002759 ORTHO05D003290 2.0e-137 495.7 2527 23.8
BraA01t01371Z Brassica rapa HOM05D002759 ORTHO05D003290 3.4e-137 495.0 2513 23.8
MELO3C011463.2 Cucumis melo HOM05D002759 ORTHO05D003290 5.8e-137 494.2 2492 24.4
Sp7g21060 Schrenkiella parvula HOM05D002759 ORTHO05D003290 7.6e-137 493.8 2513 24.2
THA.LOC104814230 Tarenaya hassleriana HOM05D002759 ORTHO05D003290 9.9e-137 493.4 2341 24.7
Carub.0007s1830 Capsella rubella HOM05D002759 ORTHO05D003290 2.9e-136 491.9 2522 24.1
Nitab4.5_0004005g0050 Nicotiana tabacum HOM05D002759 ORTHO05D003290 2.9e-136 491.9 2467 24.6
Peaxi162Scf00011g00138 Petunia axillaris HOM05D002759 ORTHO05D003290 3.8e-136 491.5 2454 25.1
A01p14240 Brassica napus HOM05D002759 ORTHO05D003290 4.9e-136 491.1 2518 23.8
AL7G30550 Arabidopsis lyrata HOM05D002759 ORTHO05D003290 1.1e-135 490.0 2519 23.7
BcaC09g51048 Brassica carinata HOM05D002759 ORTHO05D003290 2.4e-135 488.8 2520 23.5
BolC7t45725H Brassica oleracea HOM05D002759 ORTHO05D003290 3.2e-135 488.4 2530 24.0
C01p17510 Brassica napus HOM05D002759 ORTHO05D003290 2.1e-134 485.7 2528 23.7
Zm00001eb193470 Zea mays HOM05D002759 ORTHO05D003290 6.0e-134 484.2 2531 24.0
Lj1g0017629 Lotus japonicus HOM05D002759 ORTHO05D003290 1.7e-133 482.6 2457 24.1
Lalb_Chr20g0123401 Lupinus albus HOM05D002759 ORTHO05D003290 3.0e-133 481.9 2505 24.2
Cfa017189 Carpinus fangiana HOM05D002759 ORTHO05D003290 1.1e-132 479.9 1901 26.2
SGA_v2.0_scaffold110G31284 Striga asiatica HOM05D002759 ORTHO05D003290 5.6e-132 477.6 2515 23.9
Medtr7g023120 Medicago truncatula HOM05D002759 ORTHO05D003290 7.3e-132 477.2 2484 23.9
Migut.B00666 Erythranthe guttata HOM05D002759 ORTHO05D003290 1.3e-131 476.5 2442 24.9
TPR.G2149 Trifolium pratense HOM05D002759 ORTHO05D003290 1.3e-131 476.5 2513 23.7
BcaNung01007 Brassica carinata HOM05D002759 ORTHO05D003290 3.6e-131 474.9 2519 23.5
CsaV3_6G032190 Cucumis sativus L. HOM05D002759 ORTHO05D003290 3.6e-131 474.9 2492 23.9
Aa31LG6G5020 Aethionema arabicum HOM05D002759 ORTHO05D003290 6.2e-131 474.2 2542 22.9
COL.COLO4_08439 Corchorus olitorius HOM05D002759 ORTHO05D003290 4.0e-130 471.5 2312 24.0
Glyma.15G048100 Glycine max HOM05D002759 ORTHO05D003290 9.0e-130 470.3 2219 25.0
Medtr2g007790 Medicago truncatula HOM05D002759 ORTHO05D003290 3.4e-129 468.4 2273 24.1
Nitab4.5_0005539g0020 Nicotiana tabacum HOM05D002759 ORTHO05D003290 7.6e-129 467.2 2329 25.0
A03p53910 Brassica napus HOM05D002759 ORTHO05D003290 2.9e-128 465.3 2324 23.7
HanXRQChr10g0290421 Helianthus annuus HOM05D002759 ORTHO05D003290 1.9e-127 462.6 1915 25.5
BraA03t14460Z Brassica rapa HOM05D002759 ORTHO05D003290 3.2e-127 461.8 2324 23.8
Gorai.002G207900 Gossypium raimondii HOM05D002759 ORTHO05D003290 1.2e-126 459.9 1882 25.6
ECA234G1843 Erigeron canadensis HOM05D002759 ORTHO05D003290 2.7e-126 458.8 1912 24.4
Sabra03G0013600 Salix brachista HOM05D002759 ORTHO05D003290 1.3e-125 456.4 2535 23.9
Eucgr.G00634 Eucalyptus grandis HOM05D002759 ORTHO05D003290 1.1e-124 453.4 2353 24.3
CSS0015736 Camellia sinensis var. sinensis HOM05D002759 ORTHO05D003290 1.6e-123 449.5 2068 24.6
Ca_00091_v3 Cicer arietinum L. HOM05D002759 ORTHO05D003290 2.8e-123 448.7 2474 23.8
Ca_29930_v3 Cicer arietinum L. HOM05D002759 ORTHO05D003290 2.8e-123 448.7 2474 23.8
Cc02_g22260 Coffea canephora HOM05D002759 ORTHO05D003290 3.8e-120 438.3 1899 24.9
FAN25G1732 Fragaria x ananassa HOM05D002759 ORTHO05D003290 6.4e-120 437.6 2379 23.7
Sc19g0000800 Simmondsia chinensis HOM05D002759 ORTHO05D003290 2.3e-117 429.1 1942 24.3
CBR_g18638 Chara braunii HOM05D002759 ORTHO05D003290 8.4e-112 410.6 3191 21.9
Aqoxy7G02142 Aquilegia oxysepala HOM05D002759 ORTHO05D003290 5.5e-111 407.9 2278 23.3
AUR62035559 Chenopodium quinoa HOM05D002759 ORTHO05D003290 1.5e-108 399.8 1873 24.7
Gohir.D01G167432 Gossypium hirsutum HOM05D002759 ORTHO05D003290 4.1e-106 391.7 1405 27.7
Thhalv10029518m.g Eutrema salsugineum HOM05D002759 ORTHO05D003290 1.5e-105 389.8 2189 24.4
SEGI_09006 Sequoiadendron giganteum HOM05D002759 ORTHO05D003290 7.6e-105 387.5 703 35.4
EL10Ac3g05252 Beta vulgaris HOM05D002759 ORTHO05D003290 2.2e-104 386.0 1909 24.4
Dinv24260 Davidia involucrata HOM05D002759 ORTHO05D003290 3.8e-104 385.2 2077 23.4
HPP92_009112 Vanilla planifolia HOM05D002759 ORTHO05D003290 1.4e-101 376.7 1820 24.1
SEGI_09272 Sequoiadendron giganteum HOM05D002759 ORTHO05D003290 1.1e-100 373.6 1433 26.0
SalBow5G5260 Salvia bowleyana HOM05D002759 ORTHO05D003290 3.7e-99 368.6 1564 25.6
Hund21015 Selenicereus undatus HOM05D002759 ORTHO05D003290 4.1e-98 365.2 1789 24.5
Hund11642 Selenicereus undatus HOM05D002759 ORTHO05D003290 5.0e-96 358.2 2583 22.1
Gohir.A01G176651 Gossypium hirsutum HOM05D002759 ORTHO05D003290 1.8e-93 349.7 1279 26.9
AUR62006068 Chenopodium quinoa HOM05D002759 ORTHO05D003290 1.1e-90 340.5 1578 24.4
Os02g0770700 Oryza sativa ssp. japonica HOM05D002759 ORTHO05D003290 9.4e-87 327.4 1273 26.8
MSTRG.16534 Avicennia marina HOM05D002759 ORTHO05D003290 2.6e-84 319.3 1276 26.9
CDE09G0711 Ceratophyllum demersum HOM05D002759 ORTHO05D003290 1.7e-83 316.6 1423 25.3
Lj9A311T56 Lonicera japonica HOM05D002759 ORTHO05D003290 2.8e-83 315.8 824 28.2
MD15G1419000 Malus domestica HOM05D002759 ORTHO05D003290 2.4e-82 312.8 950 29.5
MD00G1166400 Malus domestica HOM05D002759 ORTHO05D003290 1.1e-79 303.9 1961 23.3
ATR0661G182 Amborella trichopoda HOM05D002759 ORTHO05D003290 3.6e-78 298.9 574 33.6
SEGI_00066 Sequoiadendron giganteum HOM05D002759 ORTHO05D003290 3.2e-71 275.8 555 33.0
ATR0661G443 Amborella trichopoda HOM05D002759 ORTHO05D003290 7.2e-71 274.6 1514 23.6
Lj9C311G18 Lonicera japonica HOM05D002759 ORTHO05D003290 2.8e-67 262.7 1658 22.4
RcHm_v2.0_Chr7g0177921 Rosa chinensis HOM05D002759 ORTHO05D003290 2.8e-67 262.7 1845 21.9
BcaC02g11623 Brassica carinata HOM05D002759 ORTHO05D003290 5.4e-66 258.5 1881 22.2
SEGI_24894 Sequoiadendron giganteum HOM05D002759 ORTHO05D003290 2.0e-65 256.5 562 32.6
BolC4t22942H Brassica oleracea HOM05D002759 ORTHO05D003290 3.5e-65 255.8 1885 22.2
Cpa.g.sc148.32 Carica papaya HOM05D002759 ORTHO05D003290 1.1e-63 250.8 785 28.3
MD15G1418900 Malus domestica HOM05D002759 ORTHO05D003290 2.5e-63 249.6 1259 24.7
C04p07370 Brassica napus HOM05D002759 ORTHO05D003290 1.5e-60 240.4 1797 21.2
arahy.Tifrunner.gnm1.ann1.JK8JKR Arachis hypogaea HOM05D002759 ORTHO05D003290 4.9e-59 235.3 982 24.8
BcaB02g09105 Brassica carinata HOM05D002759 ORTHO05D003290 1.8e-58 233.4 1832 21.1
FAN04G1156 Fragaria x ananassa HOM05D002759 ORTHO05D003290 3.1e-58 232.6 810 28.5
FvH4_5g29930 Fragaria vesca HOM05D002759 ORTHO05D003290 1.9e-55 223.4 337 38.9
Ah.07g205400 Amaranthus hybridus HOM05D002759 ORTHO05D003290 4.3e-55 222.2 311 40.8
CARHR230000 Cardamine hirsuta HOM05D002759 ORTHO05D003290 8.0e-54 218.0 337 35.9
Oeu008876.1 Olea europaea HOM05D002759 ORTHO05D003290 2.5e-47 196.4 1640 22.2
BolC4t22359H Brassica oleracea HOM05D002759 ORTHO05D003290 2.8e-46 193.0 1468 21.6
C04p12980 Brassica napus HOM05D002759 ORTHO05D003290 1.4e-45 190.7 922 24.9
Cre01.g029200 Chlamydomonas reinhardtii HOM05D002759 ORTHO05D003290 2.6e-44 186.4 318 34.9
FAN08G3490 Fragaria x ananassa HOM05D002759 ORTHO05D003290 9.8e-44 184.5 232 41.8
CARHR230010 Cardamine hirsuta HOM05D002759 ORTHO05D003290 2.4e-42 179.9 1081 24.2
SEGI_32877 Sequoiadendron giganteum HOM05D015553 ORTHO05D015291 1.6e-41 177.2 352 36.6
Oeu037466.1 Olea europaea HOM05D002759 ORTHO05D003290 1.5e-39 170.6 201 41.8
GSVIVG01013912001 Vitis vinifera HOM05D003578 ORTHO05D004021 9.5e-39 167.9 139 54.0
SEGI_06029 Sequoiadendron giganteum HOM05D015553 ORTHO05D015291 1.2e-38 167.5 345 35.1
BcaB05g23798 Brassica carinata HOM05D002759 ORTHO05D003290 2.1e-38 166.8 745 23.2
SEGI_22976 Sequoiadendron giganteum HOM05D002759 ORTHO05D003290 2.8e-38 166.4 379 31.4
Atru.chr6.1022 Acer truncatum HOM05D002759 ORTHO05D003290 3.6e-38 166.0 327 32.4
Ah.07g205390 Amaranthus hybridus HOM05D002759 ORTHO05D003290 2.6e-36 159.8 1483 21.7
unitig_26.g9017 Utricularia gibba HOM05D002759 ORTHO05D003290 5.8e-36 158.7 202 41.6
C04p13030 Brassica napus HOM05D002759 ORTHO05D003290 1.3e-35 157.5 1594 21.5
Aqoxy3G00697 Aquilegia oxysepala HOM05D002759 ORTHO05D003290 1.6e-33 150.6 198 42.9
SEGI_36049 Sequoiadendron giganteum HOM05D002759 ORTHO05D003290 3.6e-30 139.4 305 29.8
C04p13080 Brassica napus HOM05D002759 ORTHO05D003290 5.8e-28 132.1 318 28.9
vmacro01786 Vaccinium macrocarpon HOM05D002759 ORTHO05D003290 7.6e-28 131.7 202 39.1
SEGI_36881 Sequoiadendron giganteum HOM05D002759 ORTHO05D003290 3.8e-27 129.4 150 44.7
vmacro01782 Vaccinium macrocarpon HOM05D002759 ORTHO05D003290 1.1e-26 127.9 99 55.6
CARHR073260 Cardamine hirsuta HOM05D002759 ORTHO05D003290 2.1e-25 123.6 193 36.8
SEGI_38062 Sequoiadendron giganteum HOM05D015553 ORTHO05D015291 6.6e-24 118.6 255 35.3
Actinidia00221 Actinidia chinensis HOM05D002759 ORTHO05D003290 7.3e-23 115.2 160 45.6
RcHm_v2.0_Chr7g0223761 Rosa chinensis HOM05D002759 ORTHO05D003290 3.1e-21 109.8 183 35.0
vmacro01780 Vaccinium macrocarpon HOM05D002759 ORTHO05D003290 2.6e-20 106.7 403 27.5
MD08G1226700 Malus domestica HOM05D002759 ORTHO05D003290 3.4e-20 106.3 317 27.1
SEGI_11513 Sequoiadendron giganteum HOM05D015553 ORTHO05D015291 1.3e-19 104.4 244 31.6
Cpa.g.sc148.31 Carica papaya HOM05D002759 ORTHO05D003290 2.9e-19 103.2 559 22.4
Aqoxy3G00698 Aquilegia oxysepala HOM05D002759 ORTHO05D003290 1.6e-17 97.4 611 22.6
CARHR254490 Cardamine hirsuta HOM05D002759 ORTHO05D003290 6.0e-17 95.5 159 35.8
FAN13G1302 Fragaria x ananassa HOM05D002759 ORTHO05D003290 7.8e-17 95.1 434 27.4
CARHR254480 Cardamine hirsuta HOM05D002759 ORTHO05D003290 3.3e-15 89.7 410 25.4
Gohir.A01G176550 Gossypium hirsutum HOM05D002759 ORTHO05D003290 9.6e-15 88.2 345 22.3
Oeu043988.1 Olea europaea HOM05D002759 ORTHO05D003290 3.6e-14 86.3 93 41.9
Cpa.g.sc148.29 Carica papaya HOM05D002759 ORTHO05D003290 8.1e-14 85.1 334 24.9
Ca_21888_v3 Cicer arietinum L. HOM05D002759 ORTHO05D003290 1.4e-13 84.3 191 27.2
Gohir.D01G167366 Gossypium hirsutum HOM05D002759 ORTHO05D003290 1.4e-13 84.3 345 22.0
COL.COLO4_16679 Corchorus olitorius HOM05D002759 ORTHO05D003290 6.9e-13 82.0 123 38.2
Atru.chr12.1442 Acer truncatum HOM05D002759 ORTHO05D003290 1.3e-11 77.8 100 41.0
unitig_26.g9018 Utricularia gibba HOM05D002759 ORTHO05D003290 2.2e-11 77.0 471 19.7
C04p13010 Brassica napus HOM05D002759 ORTHO05D003290 7.1e-10 72.0 168 28.6
C04p13060 Brassica napus HOM05D002759 ORTHO05D003290 7.1e-10 72.0 168 28.6
CsaV3_6G032170 Cucumis sativus L. HOM05D002759 ORTHO05D003290 3.5e-09 69.7 313 23.6
Actinidia00220 Actinidia chinensis HOM05D002759 ORTHO05D003290 5.1e-08 65.9 133 31.6
COL.COLO4_38329 Corchorus olitorius HOM05D002759 ORTHO05D003290 4.3e-07 62.8 51 54.9
VMungo0251G3589 Vigna mungo HOM05D002759 ORTHO05D003290 1.3e-06 61.2 164 31.1
SHI26607 Sapria himalayana HOM05D002759 ORTHO05D003290 8.1e-06 58.5 353 24.6


User provided reference genes

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