Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0117s0044 Marchantia polymorpha HOM05D016123 ORTHO05D001958 3.5e-66 255.0 146 100.0
Mapoly0117s0041 Marchantia polymorpha HOM05D016123 ORTHO05D001958 3.2e-59 231.9 146 92.5
Mapoly0117s0036 Marchantia polymorpha HOM05D016123 ORTHO05D001958 6.0e-58 227.6 146 91.1
Mapoly0117s0038 Marchantia polymorpha HOM05D016123 ORTHO05D001958 6.7e-57 224.2 146 89.7
Mapoly0117s0037 Marchantia polymorpha HOM05D016123 ORTHO05D001958 8.7e-57 223.8 146 90.4
Mapoly0117s0039 Marchantia polymorpha HOM05D016123 ORTHO05D001958 1.8e-54 216.1 146 87.0
Mapoly0117s0042 Marchantia polymorpha HOM05D016123 ORTHO05D001958 4.5e-45 184.9 146 78.1
Mapoly0117s0043 Marchantia polymorpha HOM05D016123 ORTHO05D001958 1.7e-28 129.8 137 65.7
Mapoly0117s0040 Marchantia polymorpha HOM05D016123 ORTHO05D001958 4.2e-27 125.2 139 64.0
Prupe.4G020300 Prunus persica HOM05D002014 ORTHO05D001958 6.1e-10 68.2 67 44.8
Prupe.4G017100 Prunus persica HOM05D002014 ORTHO05D001958 3.0e-09 65.9 60 50.0
FAN25G0379 Fragaria x ananassa HOM05D002014 ORTHO05D001958 5.2e-09 65.1 89 38.2
Prupe.4G017000 Prunus persica HOM05D002014 ORTHO05D001958 6.7e-09 64.7 58 50.0
Duzib235G0981 Durio zibethinus HOM05D002014 ORTHO05D001958 1.5e-08 63.5 79 41.8
ATR0585G040 Amborella trichopoda HOM05D002014 ORTHO05D001958 2.0e-08 63.2 55 50.9
FvH4_7g17590 Fragaria vesca HOM05D002014 ORTHO05D001958 3.3e-08 62.4 108 51.9
FAN03G3151 Fragaria x ananassa HOM05D002014 ORTHO05D001958 3.3e-08 62.4 108 51.9
Lj6C71T2 Lonicera japonica HOM05D002014 ORTHO05D001958 5.7e-08 61.6 54 50.0
Lj6C72G5 Lonicera japonica HOM05D002014 ORTHO05D001958 5.7e-08 61.6 54 50.0
Lj6C73T1 Lonicera japonica HOM05D002014 ORTHO05D001958 5.7e-08 61.6 54 50.0
Lj6C74T0 Lonicera japonica HOM05D002014 ORTHO05D001958 5.7e-08 61.6 54 50.0
Lj6C9T0 Lonicera japonica HOM05D002014 ORTHO05D001958 5.7e-08 61.6 54 50.0
FAN10G4021 Fragaria x ananassa HOM05D002014 ORTHO05D001958 9.7e-08 60.8 138 44.9
MD10G1325100 Malus domestica HOM05D002014 ORTHO05D001958 9.7e-08 60.8 44 54.5
Duzib235G1176 Durio zibethinus HOM05D002014 ORTHO05D001958 1.3e-07 60.5 79 40.5
FvH4_3g01660 Fragaria vesca HOM05D002014 ORTHO05D001958 1.3e-07 60.5 109 34.9
FAN06G0196 Fragaria x ananassa HOM05D002014 ORTHO05D001958 1.3e-07 60.5 108 50.9
Gohir.D05G175500 Gossypium hirsutum HOM05D002014 ORTHO05D001958 1.3e-07 60.5 56 48.2
Gorai.009G180900 Gossypium raimondii HOM05D002014 ORTHO05D001958 1.3e-07 60.5 56 48.2
Sabra11G0007100 Salix brachista HOM05D002014 ORTHO05D001958 1.3e-07 60.5 54 51.9
Sabra11G0009000 Salix brachista HOM05D002014 ORTHO05D012114 1.3e-07 60.5 54 51.9
ClCG03G004340 Citrullus lanatus HOM05D002014 ORTHO05D001958 1.7e-07 60.1 70 40.0
Cpa.g.sc152.40 Carica papaya HOM05D002014 ORTHO05D001958 2.8e-07 59.3 78 37.2
CsaV3_1G010310 Cucumis sativus L. HOM05D002014 ORTHO05D001958 2.8e-07 59.3 66 40.9
Potri.011G008804 Populus trichocarpa HOM05D002014 ORTHO05D001958 2.8e-07 59.3 52 48.1
Potri.011G009000 Populus trichocarpa HOM05D002014 ORTHO05D001958 2.8e-07 59.3 52 48.1
MELO3C002422.2 Cucumis melo HOM05D002014 ORTHO05D001958 3.7e-07 58.9 66 40.9
FAN06G4303 Fragaria x ananassa HOM05D002014 ORTHO05D001958 3.7e-07 58.9 60 46.7
Potri.011G009100 Populus trichocarpa HOM05D002014 ORTHO05D001958 3.7e-07 58.9 71 39.4
arahy.Tifrunner.gnm1.ann1.62F4QN Arachis hypogaea HOM05D002014 ORTHO05D001958 4.8e-07 58.5 45 53.3
arahy.Tifrunner.gnm1.ann1.WJ6Y4Y Arachis hypogaea HOM05D002014 ORTHO05D001958 4.8e-07 58.5 45 53.3
Duzib235G0547 Durio zibethinus HOM05D002014 ORTHO05D001958 4.8e-07 58.5 56 46.4
Eucgr.E04009 Eucalyptus grandis HOM05D002014 ORTHO05D001958 4.8e-07 58.5 45 53.3
Gohir.A05G172400 Gossypium hirsutum HOM05D002014 ORTHO05D001958 4.8e-07 58.5 56 46.4
VMungo0540G0699 Vigna mungo HOM05D002014 ORTHO05D001958 4.8e-07 58.5 91 39.6
HanXRQChr01g0006441 Helianthus annuus HOM05D002014 ORTHO05D001958 6.3e-07 58.2 63 46.0
MELO3C002423.2 Cucumis melo HOM05D002014 ORTHO05D001958 8.2e-07 57.8 66 42.4
CsaV3_1G010320 Cucumis sativus L. HOM05D002014 ORTHO05D001958 8.2e-07 57.8 66 42.4
RcHm_v2.0_Chr5g0002441 Rosa chinensis HOM05D002014 ORTHO05D001958 8.2e-07 57.8 53 49.1
Lj6g0008980 Lotus japonicus HOM05D002014 ORTHO05D001958 1.1e-06 57.4 45 55.6
Psat0s4506g0080 Pisum sativum HOM05D002014 ORTHO05D001958 1.1e-06 57.4 88 37.5
Sed0027752 Sechium edule HOM05D002014 ORTHO05D001958 1.1e-06 57.4 65 41.5
FAN20G2181 Fragaria x ananassa HOM05D002014 ORTHO05D001958 1.4e-06 57.0 100 34.0
Phvul.006G147300 Phaseolus vulgaris HOM05D002014 ORTHO05D001958 1.4e-06 57.0 81 39.5
Prupe.4G218600 Prunus persica HOM05D002014 ORTHO05D001958 1.4e-06 57.0 80 40.0
Sabra04G0003900 Salix brachista HOM05D002014 ORTHO05D001958 1.4e-06 57.0 80 38.8
COL.COLO4_31810 Corchorus olitorius HOM05D002014 ORTHO05D001958 1.8e-06 56.6 57 47.4
Duzib235G0137 Durio zibethinus HOM05D002014 ORTHO05D001958 1.8e-06 56.6 74 40.5
Lj6g0024439 Lotus japonicus HOM05D002014 ORTHO05D001958 1.8e-06 56.6 45 51.1
MD10G1324900 Malus domestica HOM05D002014 ORTHO05D001958 1.8e-06 56.6 93 39.8
Phvul.006G147200 Phaseolus vulgaris HOM05D002014 ORTHO05D001958 1.8e-06 56.6 93 37.6
Psat1g178760 Pisum sativum HOM05D002014 ORTHO05D001958 1.8e-06 56.6 45 55.6
Thecc.06G225500 Theobroma cacao HOM05D002014 ORTHO05D001958 1.8e-06 56.6 56 46.4
VMungo0540G0755 Vigna mungo HOM05D002014 ORTHO05D001958 1.8e-06 56.6 45 51.1
HanXRQChr01g0004071 Helianthus annuus HOM05D002014 ORTHO05D001958 2.4e-06 56.2 100 36.0
MD10G1325200 Malus domestica HOM05D002014 ORTHO05D001958 2.4e-06 56.2 45 48.9
Dinv13928 Davidia involucrata HOM05D002014 ORTHO05D001958 3.1e-06 55.8 111 33.3
Lsat_1_v5_gn_7_15340 Lactuca sativa HOM05D002014 ORTHO05D001958 3.1e-06 55.8 52 48.1
Lj6g0003684 Lotus japonicus HOM05D002014 ORTHO05D001958 3.1e-06 55.8 45 55.6
Lj6g0005865 Lotus japonicus HOM05D002014 ORTHO05D001958 3.1e-06 55.8 45 55.6
Nn5g28113 Nelumbo nucifera HOM05D002014 ORTHO05D001958 3.1e-06 55.8 91 38.5
Potri.011G008932 Populus trichocarpa HOM05D002014 ORTHO05D001958 3.1e-06 55.8 107 34.6
Thecc.06G225800 Theobroma cacao HOM05D002014 ORTHO05D001958 3.1e-06 55.8 49 46.9
HPP92_008837 Vanilla planifolia HOM05D002014 ORTHO05D001958 3.1e-06 55.8 45 51.1
Aqoxy4G01348 Aquilegia oxysepala HOM05D002014 ORTHO05D001958 4.1e-06 55.5 57 45.6
arahy.Tifrunner.gnm1.ann1.DG0M13 Arachis hypogaea HOM05D002014 ORTHO05D001958 4.1e-06 55.5 99 32.3
CANSAT56G2270 Cannabis sativa HOM05D002014 ORTHO05D001958 4.1e-06 55.5 101 32.7
COL.COLO4_31812 Corchorus olitorius HOM05D002014 ORTHO05D001958 4.1e-06 55.5 108 40.7
Hma1.2p1_0298F.1_g117580 Hydrangea macrophylla HOM05D002014 ORTHO05D001958 4.1e-06 55.5 92 37.0
Nn1g07225 Nelumbo nucifera HOM05D002014 ORTHO05D001958 4.1e-06 55.5 45 53.3
Dinv20088 Davidia involucrata HOM05D002014 ORTHO05D001958 5.3e-06 55.1 52 48.1
MD07G1060300 Malus domestica HOM05D002014 ORTHO05D001958 5.3e-06 55.1 45 46.7
Sabra04G0003800 Salix brachista HOM05D002014 ORTHO05D001958 5.3e-06 55.1 56 44.6
SalBow8G4319 Salvia bowleyana HOM05D002014 ORTHO05D001958 5.3e-06 55.1 50 50.0
Thecc.06G225200 Theobroma cacao HOM05D002014 ORTHO05D001958 5.3e-06 55.1 113 35.4
Cfa000181 Carpinus fangiana HOM05D002014 ORTHO05D001958 7.0e-06 54.7 54 44.4
CiPaw.09G095700 Carya illinoinensis HOM05D002014 ORTHO05D001958 7.0e-06 54.7 57 43.9
Prupe.4G218500 Prunus persica HOM05D002014 ORTHO05D001958 7.0e-06 54.7 80 40.0
Solyc02g080920.3 Solanum lycopersicum HOM05D002014 ORTHO05D001958 7.0e-06 54.7 87 32.2
Thecc.06G225300 Theobroma cacao HOM05D002014 ORTHO05D001958 7.0e-06 54.7 111 35.1
HPP92_008836 Vanilla planifolia HOM05D002014 ORTHO05D001958 7.0e-06 54.7 92 37.0
Actinidia11865 Actinidia chinensis HOM05D000131 ORTHO05D000086 9.1e-06 54.3 50 50.0
CiPaw.09G095900 Carya illinoinensis HOM05D002014 ORTHO05D001958 9.1e-06 54.3 57 43.9
Lsat_1_v5_gn_7_15400 Lactuca sativa HOM05D002014 ORTHO05D001958 9.1e-06 54.3 92 35.9
Nn1g07227 Nelumbo nucifera HOM05D002014 ORTHO05D001958 9.1e-06 54.3 79 39.2
Nn5g28102 Nelumbo nucifera HOM05D002014 ORTHO05D001958 9.1e-06 54.3 54 50.0
HPP92_019369 Vanilla planifolia HOM05D002014 ORTHO05D001958 9.1e-06 54.3 88 37.5


User provided reference genes

Program Settings