Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0117s0041 Marchantia polymorpha HOM05D016123 ORTHO05D001958 2.7e-66 255.4 146 100.0
Mapoly0117s0036 Marchantia polymorpha HOM05D016123 ORTHO05D001958 3.1e-62 241.9 146 95.9
Mapoly0117s0037 Marchantia polymorpha HOM05D016123 ORTHO05D001958 5.8e-61 237.7 146 94.5
Mapoly0117s0038 Marchantia polymorpha HOM05D016123 ORTHO05D001958 1.9e-59 232.6 146 93.2
Mapoly0117s0044 Marchantia polymorpha HOM05D016123 ORTHO05D001958 3.2e-59 231.9 146 92.5
Mapoly0117s0039 Marchantia polymorpha HOM05D016123 ORTHO05D001958 9.3e-59 230.3 146 91.8
Mapoly0117s0042 Marchantia polymorpha HOM05D016123 ORTHO05D001958 2.1e-47 192.6 146 80.8
Mapoly0117s0043 Marchantia polymorpha HOM05D016123 ORTHO05D001958 1.0e-28 130.6 141 65.2
Mapoly0117s0040 Marchantia polymorpha HOM05D016123 ORTHO05D001958 2.1e-26 122.9 141 61.7
Prupe.4G020300 Prunus persica HOM05D002014 ORTHO05D001958 2.7e-10 69.3 71 43.7
FAN25G0379 Fragaria x ananassa HOM05D002014 ORTHO05D001958 2.3e-09 66.2 65 47.7
Prupe.4G017100 Prunus persica HOM05D002014 ORTHO05D001958 2.3e-09 66.2 60 50.0
Prupe.4G017000 Prunus persica HOM05D002014 ORTHO05D001958 5.2e-09 65.1 58 50.0
MD10G1324900 Malus domestica HOM05D002014 ORTHO05D001958 1.2e-08 63.9 91 42.9
Duzib235G0981 Durio zibethinus HOM05D002014 ORTHO05D001958 1.5e-08 63.5 57 50.9
Potri.011G009100 Populus trichocarpa HOM05D002014 ORTHO05D001958 1.5e-08 63.5 71 42.3
ATR0585G040 Amborella trichopoda HOM05D002014 ORTHO05D001958 2.0e-08 63.2 55 50.9
Sabra11G0007100 Salix brachista HOM05D002014 ORTHO05D001958 2.0e-08 63.2 77 44.2
CANSAT56G2270 Cannabis sativa HOM05D002014 ORTHO05D001958 2.6e-08 62.8 104 34.6
Lj6C72G5 Lonicera japonica HOM05D002014 ORTHO05D001958 2.6e-08 62.8 76 38.2
Sabra11G0009000 Salix brachista HOM05D002014 ORTHO05D012114 2.6e-08 62.8 55 52.7
FvH4_3g01660 Fragaria vesca HOM05D002014 ORTHO05D001958 3.3e-08 62.4 58 48.3
Lj6C71T2 Lonicera japonica HOM05D002014 ORTHO05D001958 3.3e-08 62.4 76 38.2
Lj6C74T0 Lonicera japonica HOM05D002014 ORTHO05D001958 3.3e-08 62.4 76 38.2
Potri.011G008804 Populus trichocarpa HOM05D002014 ORTHO05D001958 4.4e-08 62.0 72 41.7
FvH4_7g17590 Fragaria vesca HOM05D002014 ORTHO05D001958 5.7e-08 61.6 104 52.9
FAN03G3151 Fragaria x ananassa HOM05D002014 ORTHO05D001958 5.7e-08 61.6 104 52.9
Gohir.D01G069400 Gossypium hirsutum HOM05D002014 ORTHO05D001958 7.5e-08 61.2 102 38.2
Gorai.002G091700 Gossypium raimondii HOM05D002014 ORTHO05D001958 7.5e-08 61.2 102 38.2
Potri.011G009000 Populus trichocarpa HOM05D002014 ORTHO05D001958 7.5e-08 61.2 72 41.7
ECA248G0686 Erigeron canadensis HOM05D000131 ORTHO05D000086 9.7e-08 60.8 71 43.7
Gohir.A01G082700 Gossypium hirsutum HOM05D002014 ORTHO05D001958 9.7e-08 60.8 104 38.5
HanXRQChr01g0004071 Helianthus annuus HOM05D002014 ORTHO05D001958 9.7e-08 60.8 62 48.4
Lj6C73T1 Lonicera japonica HOM05D002014 ORTHO05D001958 9.7e-08 60.8 99 32.3
ClCG03G004340 Citrullus lanatus HOM05D002014 ORTHO05D001958 1.3e-07 60.5 84 35.7
Duzib235G1176 Durio zibethinus HOM05D002014 ORTHO05D001958 1.3e-07 60.5 57 49.1
Gohir.D05G175500 Gossypium hirsutum HOM05D002014 ORTHO05D001958 1.3e-07 60.5 56 48.2
Gorai.009G180900 Gossypium raimondii HOM05D002014 ORTHO05D001958 1.3e-07 60.5 56 48.2
Lj6C9T0 Lonicera japonica HOM05D002014 ORTHO05D001958 1.3e-07 60.5 99 32.3
RcHm_v2.0_Chr5g0002441 Rosa chinensis HOM05D002014 ORTHO05D001958 1.3e-07 60.5 54 50.0
Thecc.06G225500 Theobroma cacao HOM05D002014 ORTHO05D001958 1.3e-07 60.5 81 42.0
FAN20G2181 Fragaria x ananassa HOM05D002014 ORTHO05D001958 1.7e-07 60.1 78 41.0
MD10G1325100 Malus domestica HOM05D002014 ORTHO05D001958 1.7e-07 60.1 107 38.3
FAN06G0196 Fragaria x ananassa HOM05D002014 ORTHO05D001958 2.2e-07 59.7 104 51.9
CsaV3_1G010320 Cucumis sativus L. HOM05D002014 ORTHO05D001958 2.8e-07 59.3 82 34.1
Thecc.06G225200 Theobroma cacao HOM05D002014 ORTHO05D001958 2.8e-07 59.3 58 48.3
COL.COLO4_31810 Corchorus olitorius HOM05D002014 ORTHO05D001958 3.7e-07 58.9 58 48.3
MELO3C002423.2 Cucumis melo HOM05D002014 ORTHO05D001958 3.7e-07 58.9 82 34.1
FAN10G4021 Fragaria x ananassa HOM05D002014 ORTHO05D001958 3.7e-07 58.9 138 45.7
Prupe.4G218600 Prunus persica HOM05D002014 ORTHO05D001958 3.7e-07 58.9 108 35.2
arahy.Tifrunner.gnm1.ann1.62F4QN Arachis hypogaea HOM05D002014 ORTHO05D001958 4.8e-07 58.5 45 53.3
arahy.Tifrunner.gnm1.ann1.WJ6Y4Y Arachis hypogaea HOM05D002014 ORTHO05D001958 4.8e-07 58.5 45 53.3
Duzib235G0547 Durio zibethinus HOM05D002014 ORTHO05D001958 4.8e-07 58.5 56 46.4
Gohir.A05G172400 Gossypium hirsutum HOM05D002014 ORTHO05D001958 4.8e-07 58.5 56 46.4
FAN06G4303 Fragaria x ananassa HOM05D002014 ORTHO05D001958 6.3e-07 58.2 56 48.2
Potri.011G008932 Populus trichocarpa HOM05D002014 ORTHO05D001958 6.3e-07 58.2 82 37.8
Sabra04G0003900 Salix brachista HOM05D002014 ORTHO05D001958 6.3e-07 58.2 76 42.1
Thecc.06G225800 Theobroma cacao HOM05D002014 ORTHO05D001958 6.3e-07 58.2 59 45.8
Dinv20088 Davidia involucrata HOM05D002014 ORTHO05D001958 8.2e-07 57.8 53 49.1
Eucgr.E04009 Eucalyptus grandis HOM05D002014 ORTHO05D001958 8.2e-07 57.8 95 40.0
MD10G1325200 Malus domestica HOM05D002014 ORTHO05D001958 8.2e-07 57.8 57 45.6
Thecc.06G225300 Theobroma cacao HOM05D002014 ORTHO05D001958 8.2e-07 57.8 81 40.7
Lsat_1_v5_gn_7_15460 Lactuca sativa HOM05D002014 ORTHO05D001958 1.1e-06 57.4 96 36.5
Prupe.4G218500 Prunus persica HOM05D002014 ORTHO05D001958 1.1e-06 57.4 108 34.3
MELO3C002422.2 Cucumis melo HOM05D002014 ORTHO05D001958 1.4e-06 57.0 45 48.9
CsaV3_1G010310 Cucumis sativus L. HOM05D002014 ORTHO05D001958 1.4e-06 57.0 45 48.9
Hma1.2p1_0298F.1_g117580 Hydrangea macrophylla HOM05D002014 ORTHO05D001958 1.4e-06 57.0 92 35.9
Sed0027752 Sechium edule HOM05D002014 ORTHO05D001958 1.4e-06 57.0 45 51.1
HanXRQChr01g0006441 Helianthus annuus HOM05D002014 ORTHO05D001958 1.8e-06 56.6 89 40.4
Lj6g0024439 Lotus japonicus HOM05D002014 ORTHO05D001958 1.8e-06 56.6 45 51.1
Phvul.006G147200 Phaseolus vulgaris HOM05D002014 ORTHO05D001958 1.8e-06 56.6 93 37.6
Psat1g178760 Pisum sativum HOM05D002014 ORTHO05D001958 1.8e-06 56.6 94 39.4
VMungo0540G0755 Vigna mungo HOM05D002014 ORTHO05D001958 1.8e-06 56.6 45 51.1
arahy.Tifrunner.gnm1.ann1.DPYD9S Arachis hypogaea HOM05D002014 ORTHO05D001958 2.4e-06 56.2 99 37.4
ClCG03G004450 Citrullus lanatus HOM05D002014 ORTHO05D001958 2.4e-06 56.2 87 35.6
Lsat_1_v5_gn_7_15340 Lactuca sativa HOM05D002014 ORTHO05D001958 2.4e-06 56.2 52 48.1
Lj6g0008980 Lotus japonicus HOM05D002014 ORTHO05D001958 2.4e-06 56.2 98 35.7
Phvul.006G147300 Phaseolus vulgaris HOM05D002014 ORTHO05D001958 2.4e-06 56.2 45 51.1
HPP92_019369 Vanilla planifolia HOM05D002014 ORTHO05D001958 2.4e-06 56.2 81 39.5
HanXRQChr15g0470481 Helianthus annuus HOM05D002014 ORTHO05D001958 3.1e-06 55.8 82 40.2
Lsat_1_v5_gn_7_15400 Lactuca sativa HOM05D002014 ORTHO05D001958 3.1e-06 55.8 90 37.8
Lj6g0003684 Lotus japonicus HOM05D002014 ORTHO05D001958 3.1e-06 55.8 45 55.6
Lj6g0005865 Lotus japonicus HOM05D002014 ORTHO05D001958 3.1e-06 55.8 45 55.6
MD07G1060300 Malus domestica HOM05D002014 ORTHO05D001958 3.1e-06 55.8 76 39.5
SalBow8G4319 Salvia bowleyana HOM05D002014 ORTHO05D001958 3.1e-06 55.8 65 49.2
HPP92_008837 Vanilla planifolia HOM05D002014 ORTHO05D001958 3.1e-06 55.8 45 51.1
Aqoxy4G01348 Aquilegia oxysepala HOM05D002014 ORTHO05D001958 4.1e-06 55.5 57 45.6
arahy.Tifrunner.gnm1.ann1.DG0M13 Arachis hypogaea HOM05D002014 ORTHO05D001958 4.1e-06 55.5 99 34.3
Cpa.g.sc152.40 Carica papaya HOM05D002014 ORTHO05D001958 4.1e-06 55.5 49 44.9
Duzib235G0137 Durio zibethinus HOM05D002014 ORTHO05D001958 4.1e-06 55.5 56 44.6
Nn1g07225 Nelumbo nucifera HOM05D002014 ORTHO05D001958 4.1e-06 55.5 45 53.3
Nn5g28102 Nelumbo nucifera HOM05D002014 ORTHO05D001958 4.1e-06 55.5 86 37.2
Psat0s4506g0080 Pisum sativum HOM05D002014 ORTHO05D001958 4.1e-06 55.5 91 36.3
Cfa000181 Carpinus fangiana HOM05D002014 ORTHO05D001958 5.3e-06 55.1 110 31.8
Dinv13928 Davidia involucrata HOM05D002014 ORTHO05D001958 5.3e-06 55.1 112 34.8
Psat1g178720 Pisum sativum HOM05D002014 ORTHO05D001958 5.3e-06 55.1 94 37.2
Sabra04G0003800 Salix brachista HOM05D002014 ORTHO05D001958 5.3e-06 55.1 56 44.6
Haze_06834 Corylus avellana HOM05D002014 ORTHO05D001958 7.0e-06 54.7 76 38.2
HPP92_008836 Vanilla planifolia HOM05D002014 ORTHO05D001958 7.0e-06 54.7 94 38.3
Actinidia11865 Actinidia chinensis HOM05D000131 ORTHO05D000086 9.1e-06 54.3 50 50.0
Aqoxy4G01491 Aquilegia oxysepala HOM05D002014 ORTHO05D001958 9.1e-06 54.3 82 35.4
arahy.Tifrunner.gnm1.ann1.HIXG1Y Arachis hypogaea HOM05D002014 ORTHO05D001958 9.1e-06 54.3 104 34.6
COL.COLO4_31812 Corchorus olitorius HOM05D002014 ORTHO05D001958 9.1e-06 54.3 106 41.5
Nn1g07226 Nelumbo nucifera HOM05D002014 ORTHO05D001958 9.1e-06 54.3 92 37.0
Nn5g27689 Nelumbo nucifera HOM05D002014 ORTHO05D001958 9.1e-06 54.3 68 39.7
Nn5g28113 Nelumbo nucifera HOM05D002014 ORTHO05D001958 9.1e-06 54.3 68 39.7
TAR626G0649 Trochodendron aralioides HOM05D002014 ORTHO05D001958 9.1e-06 54.3 99 34.3


User provided reference genes

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