Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0117s0039 Marchantia polymorpha HOM05D016123 ORTHO05D001958 3.0e-65 251.9 146 100.0
Mapoly0117s0036 Marchantia polymorpha HOM05D016123 ORTHO05D001958 2.2e-60 235.7 146 94.5
Mapoly0117s0038 Marchantia polymorpha HOM05D016123 ORTHO05D001958 8.4e-60 233.8 146 93.8
Mapoly0117s0037 Marchantia polymorpha HOM05D016123 ORTHO05D001958 4.2e-59 231.5 146 93.2
Mapoly0117s0041 Marchantia polymorpha HOM05D016123 ORTHO05D001958 3.5e-58 228.4 146 91.8
Mapoly0117s0044 Marchantia polymorpha HOM05D016123 ORTHO05D001958 6.9e-54 214.2 146 87.0
Mapoly0117s0042 Marchantia polymorpha HOM05D016123 ORTHO05D001958 4.5e-45 184.9 146 80.1
Mapoly0117s0043 Marchantia polymorpha HOM05D016123 ORTHO05D001958 1.4e-25 120.2 141 63.1
Mapoly0117s0040 Marchantia polymorpha HOM05D016123 ORTHO05D001958 1.7e-23 113.2 143 60.8
Prupe.4G020300 Prunus persica HOM05D002014 ORTHO05D001958 2.1e-10 69.7 69 44.9
FAN03G3151 Fragaria x ananassa HOM05D002014 ORTHO05D001958 3.0e-09 65.9 108 53.7
Prupe.4G017100 Prunus persica HOM05D002014 ORTHO05D001958 5.2e-09 65.1 63 46.0
FAN25G0379 Fragaria x ananassa HOM05D002014 ORTHO05D001958 1.2e-08 63.9 56 50.0
Prupe.4G017000 Prunus persica HOM05D002014 ORTHO05D001958 1.5e-08 63.5 73 42.5
ATR0585G040 Amborella trichopoda HOM05D002014 ORTHO05D001958 2.6e-08 62.8 55 49.1
MD10G1325100 Malus domestica HOM05D002014 ORTHO05D001958 2.6e-08 62.8 63 47.6
FAN10G4021 Fragaria x ananassa HOM05D002014 ORTHO05D001958 3.3e-08 62.4 138 46.4
ClCG03G004340 Citrullus lanatus HOM05D002014 ORTHO05D001958 4.4e-08 62.0 73 42.5
FvH4_7g17590 Fragaria vesca HOM05D002014 ORTHO05D001958 4.4e-08 62.0 142 45.8
HPP92_019369 Vanilla planifolia HOM05D002014 ORTHO05D001958 4.4e-08 62.0 88 39.8
Duzib235G0981 Durio zibethinus HOM05D002014 ORTHO05D001958 7.5e-08 61.2 77 41.6
Sabra11G0007100 Salix brachista HOM05D002014 ORTHO05D001958 9.7e-08 60.8 55 50.9
Sabra11G0009000 Salix brachista HOM05D002014 ORTHO05D012114 9.7e-08 60.8 55 50.9
COL.COLO4_31810 Corchorus olitorius HOM05D002014 ORTHO05D001958 1.3e-07 60.5 76 39.5
FvH4_3g01660 Fragaria vesca HOM05D002014 ORTHO05D001958 1.3e-07 60.5 56 48.2
Thecc.06G225300 Theobroma cacao HOM05D002014 ORTHO05D001958 1.3e-07 60.5 79 41.8
Duzib235G1176 Durio zibethinus HOM05D002014 ORTHO05D001958 1.7e-07 60.1 77 40.3
RcHm_v2.0_Chr5g0002441 Rosa chinensis HOM05D002014 ORTHO05D001958 1.7e-07 60.1 54 50.0
Nn5g28113 Nelumbo nucifera HOM05D002014 ORTHO05D001958 2.2e-07 59.7 63 49.2
Potri.011G009100 Populus trichocarpa HOM05D002014 ORTHO05D001958 2.2e-07 59.7 71 39.4
FAN06G4303 Fragaria x ananassa HOM05D002014 ORTHO05D001958 2.8e-07 59.3 94 39.4
MELO3C002422.2 Cucumis melo HOM05D002014 ORTHO05D001958 3.7e-07 58.9 73 41.1
FAN06G0196 Fragaria x ananassa HOM05D002014 ORTHO05D001958 3.7e-07 58.9 94 39.4
Potri.011G008804 Populus trichocarpa HOM05D002014 ORTHO05D001958 3.7e-07 58.9 73 38.4
Prupe.4G218600 Prunus persica HOM05D002014 ORTHO05D001958 3.7e-07 58.9 78 41.0
Duzib235G0547 Durio zibethinus HOM05D002014 ORTHO05D001958 4.8e-07 58.5 63 46.0
FAN20G2181 Fragaria x ananassa HOM05D002014 ORTHO05D001958 4.8e-07 58.5 71 45.1
Gohir.A01G082700 Gossypium hirsutum HOM05D002014 ORTHO05D001958 4.8e-07 58.5 102 38.2
Gohir.D01G069400 Gossypium hirsutum HOM05D002014 ORTHO05D001958 4.8e-07 58.5 102 37.3
Gorai.002G091700 Gossypium raimondii HOM05D002014 ORTHO05D001958 4.8e-07 58.5 102 37.3
HanXRQChr01g0006441 Helianthus annuus HOM05D002014 ORTHO05D001958 4.8e-07 58.5 61 47.5
Lj6C71T2 Lonicera japonica HOM05D002014 ORTHO05D001958 4.8e-07 58.5 54 48.1
Lj6C72G5 Lonicera japonica HOM05D002014 ORTHO05D001958 4.8e-07 58.5 54 48.1
Lj6C73T1 Lonicera japonica HOM05D002014 ORTHO05D001958 4.8e-07 58.5 54 48.1
Lj6C74T0 Lonicera japonica HOM05D002014 ORTHO05D001958 4.8e-07 58.5 54 48.1
Lj6C9T0 Lonicera japonica HOM05D002014 ORTHO05D001958 4.8e-07 58.5 54 48.1
Nn5g28102 Nelumbo nucifera HOM05D002014 ORTHO05D001958 4.8e-07 58.5 63 49.2
Thecc.06G225200 Theobroma cacao HOM05D002014 ORTHO05D001958 4.8e-07 58.5 56 48.2
Potri.011G009000 Populus trichocarpa HOM05D002014 ORTHO05D001958 6.3e-07 58.2 43 51.2
ECA248G0686 Erigeron canadensis HOM05D000131 ORTHO05D000086 8.2e-07 57.8 70 42.9
FAN01G2575 Fragaria x ananassa HOM05D002014 ORTHO05D001958 8.2e-07 57.8 149 30.2
Hma1.2p1_0298F.1_g117580 Hydrangea macrophylla HOM05D002014 ORTHO05D001958 8.2e-07 57.8 92 41.3
Aqoxy4G01348 Aquilegia oxysepala HOM05D002014 ORTHO05D001958 1.1e-06 57.4 63 47.6
Aqoxy4G01491 Aquilegia oxysepala HOM05D002014 ORTHO05D001958 1.1e-06 57.4 63 47.6
CiPaw.09G095700 Carya illinoinensis HOM05D002014 ORTHO05D001958 1.1e-06 57.4 63 47.6
Gohir.D05G175500 Gossypium hirsutum HOM05D002014 ORTHO05D001958 1.4e-06 57.0 54 46.3
Gorai.009G180900 Gossypium raimondii HOM05D002014 ORTHO05D001958 1.4e-06 57.0 54 46.3
Lsat_1_v5_gn_7_15460 Lactuca sativa HOM05D002014 ORTHO05D001958 1.4e-06 57.0 90 38.9
Lj6g0008980 Lotus japonicus HOM05D002014 ORTHO05D001958 1.4e-06 57.0 90 42.2
Phvul.006G147200 Phaseolus vulgaris HOM05D002014 ORTHO05D001958 1.4e-06 57.0 92 40.2
Thecc.06G225500 Theobroma cacao HOM05D002014 ORTHO05D001958 1.4e-06 57.0 79 40.5
Actinidia11865 Actinidia chinensis HOM05D000131 ORTHO05D000086 1.8e-06 56.6 58 50.0
arahy.Tifrunner.gnm1.ann1.62F4QN Arachis hypogaea HOM05D002014 ORTHO05D001958 1.8e-06 56.6 43 53.5
arahy.Tifrunner.gnm1.ann1.WJ6Y4Y Arachis hypogaea HOM05D002014 ORTHO05D001958 1.8e-06 56.6 43 53.5
CiPaw.09G095900 Carya illinoinensis HOM05D002014 ORTHO05D001958 1.8e-06 56.6 55 47.3
CiPaw.09G096000 Carya illinoinensis HOM05D002014 ORTHO05D001958 1.8e-06 56.6 55 47.3
CiPaw.10G073600 Carya illinoinensis HOM05D002014 ORTHO05D001958 1.8e-06 56.6 98 40.8
Lj6g0005865 Lotus japonicus HOM05D002014 ORTHO05D001958 1.8e-06 56.6 91 42.9
CsaV3_1G010310 Cucumis sativus L. HOM05D002014 ORTHO05D001958 2.4e-06 56.2 43 51.2
Gohir.A05G172400 Gossypium hirsutum HOM05D002014 ORTHO05D001958 2.4e-06 56.2 54 46.3
Lj6g0024439 Lotus japonicus HOM05D002014 ORTHO05D001958 2.4e-06 56.2 43 53.5
MD10G1324900 Malus domestica HOM05D002014 ORTHO05D001958 2.4e-06 56.2 89 38.2
CANSAT56G2270 Cannabis sativa HOM05D002014 ORTHO05D001958 3.1e-06 55.8 102 34.3
Cpa.g.sc152.40 Carica papaya HOM05D002014 ORTHO05D001958 3.1e-06 55.8 80 38.8
Lj6g0003684 Lotus japonicus HOM05D002014 ORTHO05D001958 3.1e-06 55.8 91 42.9
Phvul.006G147300 Phaseolus vulgaris HOM05D002014 ORTHO05D001958 3.1e-06 55.8 43 53.5
TWI63G0638 Tripterygium wilfordii HOM05D002014 ORTHO05D001958 3.1e-06 55.8 93 36.6
MELO3C002423.2 Cucumis melo HOM05D002014 ORTHO05D001958 4.1e-06 55.5 43 51.2
CsaV3_1G010320 Cucumis sativus L. HOM05D002014 ORTHO05D001958 4.1e-06 55.5 43 51.2
Eucgr.E04009 Eucalyptus grandis HOM05D002014 ORTHO05D001958 4.1e-06 55.5 96 39.6
HanXRQChr01g0004071 Helianthus annuus HOM05D002014 ORTHO05D001958 4.1e-06 55.5 103 37.9
HanXRQChr15g0470481 Helianthus annuus HOM05D002014 ORTHO05D001958 4.1e-06 55.5 87 39.1
Lsat_1_v5_gn_7_15340 Lactuca sativa HOM05D002014 ORTHO05D001958 4.1e-06 55.5 52 48.1
Potri.011G008932 Populus trichocarpa HOM05D002014 ORTHO05D001958 4.1e-06 55.5 54 46.3
SalBow8G4319 Salvia bowleyana HOM05D002014 ORTHO05D001958 4.1e-06 55.5 61 49.2
Nn5g27689 Nelumbo nucifera HOM05D002014 ORTHO05D001958 5.3e-06 55.1 63 46.0
Sabra04G0003900 Salix brachista HOM05D002014 ORTHO05D001958 5.3e-06 55.1 54 46.3
Sed0027752 Sechium edule HOM05D002014 ORTHO05D001958 5.3e-06 55.1 43 51.2
TAR624G0852 Trochodendron aralioides HOM05D002014 ORTHO05D001958 5.3e-06 55.1 63 42.9
Dinv13928 Davidia involucrata HOM05D002014 ORTHO05D001958 7.0e-06 54.7 105 35.2
Lj6C73T0 Lonicera japonica HOM05D002014 ORTHO05D001958 7.0e-06 54.7 72 37.5
Psat0s4506g0080 Pisum sativum HOM05D002014 ORTHO05D001958 7.0e-06 54.7 43 53.5
Prupe.4G218500 Prunus persica HOM05D002014 ORTHO05D001958 7.0e-06 54.7 78 38.5
COL.COLO4_31812 Corchorus olitorius HOM05D002014 ORTHO05D001958 9.1e-06 54.3 101 41.6
Duzib235G0137 Durio zibethinus HOM05D002014 ORTHO05D001958 9.1e-06 54.3 54 44.4
Psat1g178760 Pisum sativum HOM05D002014 ORTHO05D001958 9.1e-06 54.3 88 37.5


User provided reference genes

Program Settings