Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0117s0038 Marchantia polymorpha HOM05D016123 ORTHO05D001958 2.3e-65 252.3 146 100.0
Mapoly0117s0036 Marchantia polymorpha HOM05D016123 ORTHO05D001958 1.7e-60 236.1 146 94.5
Mapoly0117s0039 Marchantia polymorpha HOM05D016123 ORTHO05D001958 1.1e-59 233.4 146 93.8
Mapoly0117s0037 Marchantia polymorpha HOM05D016123 ORTHO05D001958 3.2e-59 231.9 146 93.2
Mapoly0117s0041 Marchantia polymorpha HOM05D016123 ORTHO05D001958 9.3e-59 230.3 146 93.2
Mapoly0117s0044 Marchantia polymorpha HOM05D016123 ORTHO05D001958 3.3e-56 221.9 146 89.7
Mapoly0117s0042 Marchantia polymorpha HOM05D016123 ORTHO05D001958 6.5e-44 181.0 146 78.1
Mapoly0117s0043 Marchantia polymorpha HOM05D016123 ORTHO05D001958 1.5e-24 116.7 141 61.7
Mapoly0117s0040 Marchantia polymorpha HOM05D016123 ORTHO05D001958 1.8e-22 109.8 143 59.4
Prupe.4G020300 Prunus persica HOM05D002014 ORTHO05D001958 3.6e-10 68.9 77 42.9
Prupe.4G017100 Prunus persica HOM05D002014 ORTHO05D001958 3.0e-09 65.9 60 50.0
Prupe.4G017000 Prunus persica HOM05D002014 ORTHO05D001958 6.7e-09 64.7 58 50.0
ATR0585G040 Amborella trichopoda HOM05D002014 ORTHO05D001958 2.0e-08 63.2 55 50.9
Potri.011G009100 Populus trichocarpa HOM05D002014 ORTHO05D001958 2.0e-08 63.2 71 42.3
Potri.011G008804 Populus trichocarpa HOM05D002014 ORTHO05D001958 4.4e-08 62.0 73 41.1
Lj6C71T2 Lonicera japonica HOM05D002014 ORTHO05D001958 5.7e-08 61.6 54 50.0
Lj6C72G5 Lonicera japonica HOM05D002014 ORTHO05D001958 5.7e-08 61.6 54 50.0
Lj6C73T1 Lonicera japonica HOM05D002014 ORTHO05D001958 5.7e-08 61.6 54 50.0
Lj6C74T0 Lonicera japonica HOM05D002014 ORTHO05D001958 5.7e-08 61.6 54 50.0
Lj6C9T0 Lonicera japonica HOM05D002014 ORTHO05D001958 5.7e-08 61.6 54 50.0
ClCG03G004340 Citrullus lanatus HOM05D002014 ORTHO05D001958 7.5e-08 61.2 76 40.8
CsaV3_1G010310 Cucumis sativus L. HOM05D002014 ORTHO05D001958 7.5e-08 61.2 76 38.2
Duzib235G0981 Durio zibethinus HOM05D002014 ORTHO05D001958 7.5e-08 61.2 56 50.0
Potri.011G009000 Populus trichocarpa HOM05D002014 ORTHO05D001958 7.5e-08 61.2 73 41.1
Sabra11G0007100 Salix brachista HOM05D002014 ORTHO05D001958 7.5e-08 61.2 85 41.2
FAN10G4021 Fragaria x ananassa HOM05D002014 ORTHO05D001958 9.7e-08 60.8 138 45.7
Gohir.D05G175500 Gossypium hirsutum HOM05D002014 ORTHO05D001958 1.3e-07 60.5 56 48.2
Gorai.009G180900 Gossypium raimondii HOM05D002014 ORTHO05D001958 1.3e-07 60.5 56 48.2
Sabra11G0009000 Salix brachista HOM05D002014 ORTHO05D012114 1.3e-07 60.5 54 51.9
FvH4_3g01660 Fragaria vesca HOM05D002014 ORTHO05D001958 1.7e-07 60.1 57 47.4
FvH4_7g17590 Fragaria vesca HOM05D002014 ORTHO05D001958 1.7e-07 60.1 142 45.1
CANSAT56G2270 Cannabis sativa HOM05D002014 ORTHO05D001958 2.2e-07 59.7 104 35.6
Duzib235G1176 Durio zibethinus HOM05D002014 ORTHO05D001958 2.2e-07 59.7 79 40.5
FAN03G3151 Fragaria x ananassa HOM05D002014 ORTHO05D001958 2.8e-07 59.3 138 44.9
arahy.Tifrunner.gnm1.ann1.62F4QN Arachis hypogaea HOM05D002014 ORTHO05D001958 4.8e-07 58.5 45 53.3
arahy.Tifrunner.gnm1.ann1.WJ6Y4Y Arachis hypogaea HOM05D002014 ORTHO05D001958 4.8e-07 58.5 45 53.3
MELO3C002422.2 Cucumis melo HOM05D002014 ORTHO05D001958 4.8e-07 58.5 66 40.9
Duzib235G0547 Durio zibethinus HOM05D002014 ORTHO05D001958 4.8e-07 58.5 56 46.4
Eucgr.E04009 Eucalyptus grandis HOM05D002014 ORTHO05D001958 4.8e-07 58.5 45 53.3
Gohir.A05G172400 Gossypium hirsutum HOM05D002014 ORTHO05D001958 4.8e-07 58.5 56 46.4
Thecc.06G225300 Theobroma cacao HOM05D002014 ORTHO05D001958 4.8e-07 58.5 81 40.7
FAN20G2181 Fragaria x ananassa HOM05D002014 ORTHO05D001958 6.3e-07 58.2 56 48.2
FAN25G0379 Fragaria x ananassa HOM05D002014 ORTHO05D001958 6.3e-07 58.2 102 34.3
MD10G1324900 Malus domestica HOM05D002014 ORTHO05D001958 6.3e-07 58.2 89 39.3
Thecc.06G225200 Theobroma cacao HOM05D002014 ORTHO05D001958 6.3e-07 58.2 78 39.7
FAN06G0196 Fragaria x ananassa HOM05D002014 ORTHO05D001958 8.2e-07 57.8 142 44.4
Prupe.4G218600 Prunus persica HOM05D002014 ORTHO05D001958 8.2e-07 57.8 80 38.8
RcHm_v2.0_Chr5g0002441 Rosa chinensis HOM05D002014 ORTHO05D001958 8.2e-07 57.8 53 49.1
HPP92_019369 Vanilla planifolia HOM05D002014 ORTHO05D001958 8.2e-07 57.8 88 39.8
MELO3C002423.2 Cucumis melo HOM05D002014 ORTHO05D001958 1.1e-06 57.4 66 42.4
CsaV3_1G010320 Cucumis sativus L. HOM05D002014 ORTHO05D001958 1.1e-06 57.4 66 42.4
Lj6g0008980 Lotus japonicus HOM05D002014 ORTHO05D001958 1.1e-06 57.4 45 55.6
Potri.011G008932 Populus trichocarpa HOM05D002014 ORTHO05D001958 1.1e-06 57.4 56 46.4
Sed0027752 Sechium edule HOM05D002014 ORTHO05D001958 1.1e-06 57.4 71 39.4
Cpa.g.sc152.40 Carica papaya HOM05D002014 ORTHO05D001958 1.4e-06 57.0 58 41.4
Lsat_1_v5_gn_7_15460 Lactuca sativa HOM05D002014 ORTHO05D001958 1.4e-06 57.0 90 38.9
FAN06G4303 Fragaria x ananassa HOM05D002014 ORTHO05D001958 1.8e-06 56.6 94 38.3
Lj6g0024439 Lotus japonicus HOM05D002014 ORTHO05D001958 1.8e-06 56.6 45 51.1
Thecc.06G225500 Theobroma cacao HOM05D002014 ORTHO05D001958 1.8e-06 56.6 56 46.4
MD10G1325200 Malus domestica HOM05D002014 ORTHO05D001958 2.4e-06 56.2 45 48.9
Lsat_1_v5_gn_7_15340 Lactuca sativa HOM05D002014 ORTHO05D001958 3.1e-06 55.8 52 48.1
Lj6g0003684 Lotus japonicus HOM05D002014 ORTHO05D001958 3.1e-06 55.8 45 55.6
Lj6g0005865 Lotus japonicus HOM05D002014 ORTHO05D001958 3.1e-06 55.8 45 55.6
MD10G1325100 Malus domestica HOM05D002014 ORTHO05D001958 3.1e-06 55.8 107 34.6
Psat1g178760 Pisum sativum HOM05D002014 ORTHO05D001958 3.1e-06 55.8 90 38.9
Sabra04G0003900 Salix brachista HOM05D002014 ORTHO05D001958 3.1e-06 55.8 54 48.1
Thecc.06G225800 Theobroma cacao HOM05D002014 ORTHO05D001958 3.1e-06 55.8 49 46.9
HPP92_008837 Vanilla planifolia HOM05D002014 ORTHO05D001958 3.1e-06 55.8 45 51.1
Aqoxy4G01348 Aquilegia oxysepala HOM05D002014 ORTHO05D001958 4.1e-06 55.5 57 45.6
Duzib235G0137 Durio zibethinus HOM05D002014 ORTHO05D001958 4.1e-06 55.5 56 44.6
HanXRQChr15g0470481 Helianthus annuus HOM05D002014 ORTHO05D001958 4.1e-06 55.5 87 39.1
Psat0s4506g0080 Pisum sativum HOM05D002014 ORTHO05D001958 4.1e-06 55.5 88 38.6
Prupe.4G218500 Prunus persica HOM05D002014 ORTHO05D001958 4.1e-06 55.5 80 38.8
ECA248G0686 Erigeron canadensis HOM05D000131 ORTHO05D000086 5.3e-06 55.1 70 41.4
FAN01G2575 Fragaria x ananassa HOM05D002014 ORTHO05D001958 5.3e-06 55.1 149 29.5
MD07G1060300 Malus domestica HOM05D002014 ORTHO05D001958 5.3e-06 55.1 45 46.7
Psat1g178720 Pisum sativum HOM05D002014 ORTHO05D001958 5.3e-06 55.1 90 37.8
Sabra04G0003800 Salix brachista HOM05D002014 ORTHO05D001958 5.3e-06 55.1 56 44.6
HPP92_008836 Vanilla planifolia HOM05D002014 ORTHO05D001958 5.3e-06 55.1 94 39.4
Cfa000180 Carpinus fangiana HOM05D002014 ORTHO05D001958 7.0e-06 54.7 70 38.6
Lsat_1_v5_gn_7_15400 Lactuca sativa HOM05D002014 ORTHO05D001958 7.0e-06 54.7 95 37.9
Phvul.006G147200 Phaseolus vulgaris HOM05D002014 ORTHO05D001958 7.0e-06 54.7 89 39.3
SalBow8G4319 Salvia bowleyana HOM05D002014 ORTHO05D001958 7.0e-06 54.7 50 50.0
Sed0013643 Sechium edule HOM05D002014 ORTHO05D001958 7.0e-06 54.7 77 36.4
arahy.Tifrunner.gnm1.ann1.DPYD9S Arachis hypogaea HOM05D002014 ORTHO05D001958 9.1e-06 54.3 90 36.7
Hma1.2p1_0298F.1_g117580 Hydrangea macrophylla HOM05D002014 ORTHO05D001958 9.1e-06 54.3 92 37.0
Nn5g28102 Nelumbo nucifera HOM05D002014 ORTHO05D001958 9.1e-06 54.3 54 50.0
VMungo0540G0699 Vigna mungo HOM05D002014 ORTHO05D001958 9.1e-06 54.3 89 39.3


User provided reference genes

Program Settings