Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0117s0028 Marchantia polymorpha HOM05D006588 ORTHO05D008272 1.7e-285 985.3 499 100.0
Mapoly0029s0113 Marchantia polymorpha HOM05D006588 ORTHO05D008272 3.0e-133 479.6 498 54.6
Mapoly0117s0029 Marchantia polymorpha HOM05D006588 ORTHO05D008272 1.5e-121 440.7 469 51.6
Pp3c10_4240 Physcomitrium patens HOM05D006588 ORTHO05D008272 2.2e-91 340.5 409 44.0
Pp3c1_20980 Physcomitrium patens HOM05D006588 ORTHO05D008272 1.7e-88 330.9 398 43.2
Pp3c2_16400 Physcomitrium patens HOM05D006588 ORTHO05D008272 5.0e-88 329.3 398 42.7
Pp3c21_900 Physcomitrium patens HOM05D006588 ORTHO05D008272 4.7e-70 269.6 482 33.4
Pp3c13_20140 Physcomitrium patens HOM05D006588 ORTHO05D008272 1.3e-67 261.5 408 36.3
Pp3c4_15950 Physcomitrium patens HOM05D006588 ORTHO05D008272 1.6e-65 254.6 397 36.8
Pp3c19_6110 Physcomitrium patens HOM05D006588 ORTHO05D008272 6.2e-62 242.7 520 31.3
Pp3c18_21550 Physcomitrium patens HOM05D006588 ORTHO05D008272 1.1e-61 241.9 409 33.5
Pp3c22_1680 Physcomitrium patens HOM05D006588 ORTHO05D008272 2.2e-59 234.2 517 29.6
Pp3c21_1000 Physcomitrium patens HOM05D006588 ORTHO05D008272 5.4e-50 203.0 472 29.4
Pp3c21_980 Physcomitrium patens HOM05D006588 ORTHO05D008272 5.4e-50 203.0 358 31.8
SEGI_25649 Sequoiadendron giganteum HOM05D006588 ORTHO05D008272 3.1e-45 187.2 426 28.6
AagrBONN_evm.TU.Sc2ySwM_228.3249 Anthoceros agrestis HOM05D006588 ORTHO05D008272 1.2e-36 158.7 346 29.8
Lj4C316T0 Lonicera japonica HOM05D006588 ORTHO05D008272 1.0e-32 145.6 425 26.1
TAR636G2459 Trochodendron aralioides HOM05D006588 ORTHO05D008272 6.7e-32 142.9 452 23.9
CANSAT56G3648 Cannabis sativa HOM05D006588 ORTHO05D008272 8.7e-32 142.5 454 24.7
Thecc.09G094100 Theobroma cacao HOM05D006588 ORTHO05D008272 8.7e-32 142.5 456 25.9
Atru.chr7.1520 Acer truncatum HOM05D006588 ORTHO05D008272 1.9e-31 141.4 453 27.2
CANSAT56G2228 Cannabis sativa HOM05D006588 ORTHO05D008272 1.9e-31 141.4 454 24.7
Duzib150G1363 Durio zibethinus HOM05D006588 ORTHO05D008272 2.5e-31 141.0 452 25.2
Pp3c21_1020 Physcomitrium patens HOM05D006588 ORTHO05D008272 4.3e-31 140.2 197 35.5
TWI34G1517 Tripterygium wilfordii HOM05D006588 ORTHO05D008272 1.4e-29 135.2 431 24.6
CANSAT56G0790 Cannabis sativa HOM05D006588 ORTHO05D008272 1.8e-29 134.8 419 25.1
HPP92_003983 Vanilla planifolia HOM05D006588 ORTHO05D008272 5.3e-29 133.3 430 26.3
ATR0789G046 Amborella trichopoda HOM05D006588 ORTHO05D008272 6.9e-29 132.9 395 25.8
Migut.K00574 Erythranthe guttata HOM05D006588 ORTHO05D008272 2.6e-28 131.0 459 23.5
Dinv36733 Davidia involucrata HOM05D006588 ORTHO05D008272 5.8e-28 129.8 419 23.6
Ciclev10008264m.g Citrus clementina HOM05D006588 ORTHO05D008272 7.6e-28 129.4 422 23.7
Lsat_1_v5_gn_7_39041 Lactuca sativa HOM05D006588 ORTHO05D008272 7.6e-28 129.4 457 24.7
Gorai.010G080900 Gossypium raimondii HOM05D006588 ORTHO05D008272 1.0e-27 129.0 403 24.6
Gohir.D06G069300 Gossypium hirsutum HOM05D006588 ORTHO05D008272 1.3e-27 128.6 399 24.6
Nn6g35407 Nelumbo nucifera HOM05D006588 ORTHO05D008272 1.7e-27 128.3 404 25.5
Cc06_g10980 Coffea canephora HOM05D006588 ORTHO05D008272 2.2e-27 127.9 428 24.5
HanXRQChr09g0238251 Helianthus annuus HOM05D006588 ORTHO05D008272 2.9e-27 127.5 461 23.4
Hma1.2p1_1074F.1_g254320 Hydrangea macrophylla HOM05D006588 ORTHO05D008272 6.5e-27 126.3 462 24.0
Manes.03G030400 Manihot esculenta HOM05D006588 ORTHO05D008272 1.1e-26 125.6 451 24.2
CDE06G2665 Ceratophyllum demersum HOM05D006588 ORTHO05D008272 1.4e-26 125.2 403 22.8
CSS0027625 Camellia sinensis var. sinensis HOM05D006588 ORTHO05D008272 3.2e-26 124.0 421 24.0
MBI04_g06220_MAGBIO Magnolia biondii HOM05D006588 ORTHO05D008272 3.2e-26 124.0 431 25.1
VMungo0251G0425 Vigna mungo HOM05D006588 ORTHO05D008272 3.2e-26 124.0 457 24.3
MSTRG.10583 Avicennia marina HOM05D006588 ORTHO05D008272 4.2e-26 123.6 459 23.7
Glyma.08G030700 Glycine max HOM05D006588 ORTHO05D008272 4.2e-26 123.6 458 23.1
Psat7g018800 Pisum sativum HOM05D006588 ORTHO05D008272 9.3e-26 122.5 453 23.6
Sc15g0003870 Simmondsia chinensis HOM05D006588 ORTHO05D008272 1.2e-25 122.1 454 23.8
Phvul.002G305400 Phaseolus vulgaris HOM05D006588 ORTHO05D008272 2.1e-25 121.3 456 24.3
CsaV3_5G029260 Cucumis sativus L. HOM05D006588 ORTHO05D008272 3.5e-25 120.6 438 24.9
Lj4g0006334 Lotus japonicus HOM05D006588 ORTHO05D008272 3.5e-25 120.6 457 23.6
Cfa003132 Carpinus fangiana HOM05D006588 ORTHO05D008272 4.6e-25 120.2 402 24.4
ClCG11G012860 Citrullus lanatus HOM05D006588 ORTHO05D008272 6.0e-25 119.8 311 27.7
Gohir.A06G070700 Gossypium hirsutum HOM05D006588 ORTHO05D008272 6.0e-25 119.8 284 27.8
ECA240G3150 Erigeron canadensis HOM05D006588 ORTHO05D008272 7.9e-25 119.4 457 22.3
SalBow1G2363 Salvia bowleyana HOM05D006588 ORTHO05D008272 1.0e-24 119.0 429 23.8
SalBow1G2795 Salvia bowleyana HOM05D006588 ORTHO05D008272 1.0e-24 119.0 429 23.8
CiPaw.03G219600 Carya illinoinensis HOM05D006588 ORTHO05D008272 3.0e-24 117.5 312 27.9
Lalb_Chr09g0331761 Lupinus albus HOM05D006588 ORTHO05D008272 5.1e-24 116.7 458 23.4
Rhsim05G0031800 Rhododendron simsii HOM05D006588 ORTHO05D008272 6.7e-24 116.3 452 23.5
THA.LOC104814599 Tarenaya hassleriana HOM05D006588 ORTHO05D008272 6.7e-24 116.3 408 23.5
Ca_17389_v3 Cicer arietinum L. HOM05D006588 ORTHO05D008272 1.1e-23 115.5 457 22.1
QL02p063459 Quercus lobata HOM05D006588 ORTHO05D008272 4.3e-23 113.6 460 24.8
unitig_699.g19309 Utricularia gibba HOM05D006588 ORTHO05D008272 4.3e-23 113.6 314 27.7
Lsat_1_v5_gn_7_38040 Lactuca sativa HOM05D006588 ORTHO05D008272 7.4e-23 112.8 322 28.6
Aa31LG2G21010 Aethionema arabicum HOM05D006588 ORTHO05D008272 1.3e-22 112.1 431 23.4
TPR.G25442 Trifolium pratense HOM05D006588 ORTHO05D008272 2.8e-22 110.9 459 22.2
Sed0004057 Sechium edule HOM05D006588 ORTHO05D008272 4.8e-22 110.2 311 27.3
AT4G29420 Arabidopsis thaliana HOM05D006588 ORTHO05D008272 1.1e-21 109.0 385 24.9
A01p08610 Brassica napus HOM05D006588 ORTHO05D008272 1.1e-21 109.0 347 27.4
Carub.0007s1112 Capsella rubella HOM05D006588 ORTHO05D008272 1.8e-21 108.2 286 26.9
Thhalv10025196m.g Eutrema salsugineum HOM05D006588 ORTHO05D008272 1.8e-21 108.2 286 26.9
Sp7g27300 Schrenkiella parvula HOM05D006588 ORTHO05D008272 5.3e-21 106.7 301 26.9
BraA01t00812Z Brassica rapa HOM05D006588 ORTHO05D008272 9.0e-21 105.9 313 25.6
BolC1t00966H Brassica oleracea HOM05D006588 ORTHO05D008272 1.5e-20 105.1 301 27.9
AL7G22970 Arabidopsis lyrata HOM05D006588 ORTHO05D008272 2.0e-20 104.8 286 27.3
Pp3s358_10 Physcomitrium patens HOM05D006588 ORTHO05D008272 1.0e-19 102.4 180 28.3
C01p10080 Brassica napus HOM05D006588 ORTHO05D008272 1.3e-19 102.1 301 27.6
Zm00001eb121140 Zea mays HOM05D006588 ORTHO05D008272 2.5e-18 97.8 404 24.3
Eucgr.C00929 Eucalyptus grandis HOM05D006588 ORTHO05D008272 3.2e-18 97.4 330 26.7
Oeu018228.1 Olea europaea HOM05D006588 ORTHO05D008272 4.2e-18 97.1 435 22.3
Pp3s358_1 Physcomitrium patens HOM05D006588 ORTHO05D008272 8.7e-16 89.4 124 31.5
SGA_v2.0_scaffold28G11949 Striga asiatica HOM05D006588 ORTHO05D008272 1.1e-15 89.0 462 21.9
Lsat_1_v5_gn_7_38281 Lactuca sativa HOM05D006588 ORTHO05D008272 1.9e-15 88.2 318 24.5
Lsat_1_v5_gn_7_38780 Lactuca sativa HOM05D006588 ORTHO05D008272 5.7e-15 86.7 344 24.1
CARHR237240 Cardamine hirsuta HOM05D006588 ORTHO05D008272 2.2e-14 84.7 289 24.9
Duzib168G2000 Durio zibethinus HOM05D006588 ORTHO05D002622 2.8e-14 84.3 183 28.4
Lsat_1_v5_gn_7_37981 Lactuca sativa HOM05D006588 ORTHO05D008272 2.8e-14 84.3 318 24.8
Lsat_1_v5_gn_7_38001 Lactuca sativa HOM05D006588 ORTHO05D008272 2.8e-14 84.3 318 24.8
HanXRQChr03g0061101 Helianthus annuus HOM05D006588 ORTHO05D008272 3.7e-14 84.0 418 23.7
Actinidia25278 Actinidia chinensis HOM05D006588 ORTHO05D008272 8.2e-14 82.8 188 27.7
HanXRQChr03g0060671 Helianthus annuus HOM05D006588 ORTHO05D008272 8.2e-14 82.8 419 22.2
HanXRQChr03g0060681 Helianthus annuus HOM05D006588 ORTHO05D008272 1.1e-13 82.4 418 21.8
Actinidia39746 Actinidia chinensis HOM05D006588 ORTHO05D008272 1.5e-12 78.6 188 27.1
Eucgr.L03123 Eucalyptus grandis HOM05D006588 ORTHO05D008272 2.6e-12 77.8 202 26.7
HanXRQChr03g0060991 Helianthus annuus HOM05D006588 ORTHO05D008272 2.6e-12 77.8 401 22.7
HanXRQChr03g0060651 Helianthus annuus HOM05D006588 ORTHO05D008272 3.4e-12 77.4 308 24.4
HanXRQChr03g0060961 Helianthus annuus HOM05D006588 ORTHO05D008272 3.4e-12 77.4 267 25.1
Medtr8g101930 Medicago truncatula HOM05D006588 ORTHO05D008272 2.2e-11 74.7 394 20.3
COL.COLO4_18239 Corchorus olitorius HOM05D006588 ORTHO05D008272 6.5e-11 73.2 182 27.5
Rhsim05G0031700 Rhododendron simsii HOM05D006588 ORTHO05D008272 1.4e-10 72.0 230 26.1
Os01g0193500 Oryza sativa ssp. japonica HOM05D006588 ORTHO05D008272 3.2e-10 70.9 196 26.0
Lsat_1_v5_gn_7_39080 Lactuca sativa HOM05D006588 ORTHO05D008272 3.9e-08 63.9 172 25.0
Lsat_1_v5_gn_7_38181 Lactuca sativa HOM05D006588 ORTHO05D008272 2.6e-07 61.2 213 23.9
Nn7g36587 Nelumbo nucifera HOM05D006588 ORTHO05D008272 5.7e-07 60.1 209 24.4
CANSAT56G3251 Cannabis sativa HOM05D006588 ORTHO05D008272 6.3e-06 56.6 280 21.1


User provided reference genes

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