Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0117s0018 Marchantia polymorpha HOM05D014630 ORTHO05D019289 2.3e-96 355.5 178 100.0
Mapoly0117s0016 Marchantia polymorpha HOM05D014630 ORTHO05D019289 1.0e-75 287.0 173 83.2
Mapoly0117s0014 Marchantia polymorpha HOM05D014630 ORTHO05D019289 3.9e-75 285.0 173 82.7
Mapoly0062s0101 Marchantia polymorpha HOM05D014630 ORTHO05D019289 4.3e-74 281.6 173 81.5
Mapoly0117s0017 Marchantia polymorpha HOM05D014630 ORTHO05D019289 7.3e-74 280.8 177 81.9
Mapoly0117s0013 Marchantia polymorpha HOM05D014630 ORTHO05D019289 1.1e-72 276.9 173 79.8
Mapoly0117s0015 Marchantia polymorpha HOM05D014630 ORTHO05D019289 4.9e-70 268.1 172 77.3
Mapoly0016s0063 Marchantia polymorpha HOM05D014630 ORTHO05D019289 1.5e-15 87.0 131 35.9
Mapoly0078s0058 Marchantia polymorpha HOM05D014630 ORTHO05D000099 2.7e-12 76.3 150 37.3
Mapoly0006s0217 Marchantia polymorpha HOM05D014630 ORTHO05D000099 1.0e-11 74.3 143 36.4
SEGI_40814 Sequoiadendron giganteum HOM05D000180 ORTHO05D000099 1.5e-10 70.5 151 32.5
VMungo0331G1833 Vigna mungo HOM05D000180 ORTHO05D000099 6.3e-09 65.1 148 29.7
SMO347G0300 Selaginella moellendorffii HOM05D000180 ORTHO05D000099 1.8e-08 63.5 122 34.4
SEGI_17706 Sequoiadendron giganteum HOM05D000180 ORTHO05D000099 5.3e-08 62.0 126 33.3
Ah.12g065140 Amaranthus hybridus HOM05D000180 ORTHO05D000099 7.0e-08 61.6 136 28.7
ATR0810G002 Amborella trichopoda HOM05D000180 ORTHO05D000099 9.1e-08 61.2 127 29.1
SalBow6G2900 Salvia bowleyana HOM05D000180 ORTHO05D000099 1.2e-07 60.8 148 29.1
COL.COLO4_17291 Corchorus olitorius HOM05D000180 ORTHO05D000099 1.6e-07 60.5 126 28.6
FvH4_7g31480 Fragaria vesca HOM05D000180 ORTHO05D000099 1.6e-07 60.5 149 34.2
PSO541G2644 Papaver somniferum HOM05D000180 ORTHO05D000099 1.6e-07 60.5 154 29.9
ATR0810G236 Amborella trichopoda HOM05D000180 ORTHO05D000099 2.0e-07 60.1 127 33.9
FAN27G3186 Fragaria x ananassa HOM05D000180 ORTHO05D000099 2.0e-07 60.1 126 30.2
PSO541G0521 Papaver somniferum HOM05D000180 ORTHO05D000099 2.0e-07 60.1 155 30.3
PSO675G7216 Papaver somniferum HOM05D000180 ORTHO05D000099 2.0e-07 60.1 183 29.5
ATR0081G048 Amborella trichopoda HOM05D000180 ORTHO05D000099 2.6e-07 59.7 127 33.9
ECA248G3820 Erigeron canadensis HOM05D000180 ORTHO05D000099 2.6e-07 59.7 151 29.1
RcHm_v2.0_Chr2g0158861 Rosa chinensis HOM05D000180 ORTHO05D000099 2.6e-07 59.7 148 33.8
ATR0810G295 Amborella trichopoda HOM05D000180 ORTHO05D000099 3.5e-07 59.3 126 30.2
PSO541G0252 Papaver somniferum HOM05D000180 ORTHO05D000099 3.5e-07 59.3 142 29.6
PSO541G1206 Papaver somniferum HOM05D000180 ORTHO05D000099 3.5e-07 59.3 128 32.8
SEGI_11991 Sequoiadendron giganteum HOM05D000180 ORTHO05D000099 3.5e-07 59.3 151 33.8
SEGI_15709 Sequoiadendron giganteum HOM05D000180 ORTHO05D000099 3.5e-07 59.3 150 30.7
ATR0810G169 Amborella trichopoda HOM05D000180 ORTHO05D000099 4.5e-07 58.9 127 32.3
Eucgr.A02487 Eucalyptus grandis HOM05D000180 ORTHO05D000099 4.5e-07 58.9 126 33.3
FAN06G0338 Fragaria x ananassa HOM05D000180 ORTHO05D000099 4.5e-07 58.9 138 34.1
FAN06G1956 Fragaria x ananassa HOM05D000180 ORTHO05D000099 4.5e-07 58.9 138 34.1
SMO147G0293 Selaginella moellendorffii HOM05D000180 ORTHO05D000099 4.5e-07 58.9 126 29.4
ATR0810G065 Amborella trichopoda HOM05D000180 ORTHO05D000099 5.9e-07 58.5 126 30.2
CSS0006406 Camellia sinensis var. sinensis HOM05D000180 ORTHO05D000099 5.9e-07 58.5 139 33.1
CANSAT64G1873 Cannabis sativa HOM05D000180 ORTHO05D000099 5.9e-07 58.5 160 31.9
QL02p007150 Quercus lobata HOM05D008003 ORTHO05D010079 5.9e-07 58.5 117 28.2
ATR0081G021 Amborella trichopoda HOM05D000180 ORTHO05D000099 7.7e-07 58.2 127 32.3
SalBow1G0434 Salvia bowleyana HOM05D000180 ORTHO05D000099 7.7e-07 58.2 149 28.9
TWI60G0860 Tripterygium wilfordii HOM05D000180 ORTHO05D000099 7.7e-07 58.2 141 34.0
TWI60G1496 Tripterygium wilfordii HOM05D000180 ORTHO05D000099 7.7e-07 58.2 141 34.0
Atru.chr12.436 Acer truncatum HOM05D000180 ORTHO05D000099 1.0e-06 57.8 161 28.6
Gohir.A07G036000 Gossypium hirsutum HOM05D000180 ORTHO05D000099 1.0e-06 57.8 174 29.3
Os03g0400200 Oryza sativa ssp. japonica HOM05D000180 ORTHO05D000099 1.0e-06 57.8 169 29.6
PSO675G6155 Papaver somniferum HOM05D000180 ORTHO05D000099 1.0e-06 57.8 137 29.2
SalBow1G4753 Salvia bowleyana HOM05D000180 ORTHO05D000099 1.0e-06 57.8 148 31.8
SMO304G0105 Selaginella moellendorffii HOM05D000180 ORTHO05D000099 1.0e-06 57.8 151 33.8
SEGI_28710 Sequoiadendron giganteum HOM05D000180 ORTHO05D000099 1.0e-06 57.8 153 34.0
Aqoxy3G03747 Aquilegia oxysepala HOM05D000180 ORTHO05D000099 1.3e-06 57.4 131 32.1
MBI09_g25279_MAGBIO Magnolia biondii HOM05D000180 ORTHO05D000099 1.3e-06 57.4 127 33.1
SalBow6G6800 Salvia bowleyana HOM05D000180 ORTHO05D000099 1.3e-06 57.4 130 32.3
SEGI_27732 Sequoiadendron giganteum HOM05D000180 ORTHO05D000099 1.3e-06 57.4 148 32.4
TAR381G1448 Trochodendron aralioides HOM05D000180 ORTHO05D000099 1.7e-06 57.0 125 32.0
CDE06G2414 Ceratophyllum demersum HOM05D000180 ORTHO05D000099 2.2e-06 56.6 127 32.3
Pp3c13_12170 Physcomitrium patens HOM05D000180 ORTHO05D000099 2.2e-06 56.6 174 29.9
SMO331G0078 Selaginella moellendorffii HOM05D000180 ORTHO05D000099 2.2e-06 56.6 126 28.6
SEGI_30918 Sequoiadendron giganteum HOM05D000180 ORTHO05D000099 2.2e-06 56.6 123 35.0
CARHR168410 Cardamine hirsuta HOM05D000180 ORTHO05D000099 2.9e-06 56.2 126 31.0
COL.COLO4_30591 Corchorus olitorius HOM05D000180 ORTHO05D000099 2.9e-06 56.2 161 31.7
Gohir.A12G184300 Gossypium hirsutum HOM05D000180 ORTHO05D000099 2.9e-06 56.2 153 32.7
Lsat_1_v5_gn_1_19420 Lactuca sativa HOM05D008003 ORTHO05D010079 2.9e-06 56.2 86 34.9
PSO541G1921 Papaver somniferum HOM05D000180 ORTHO05D000099 2.9e-06 56.2 128 32.8
QL07p024903 Quercus lobata HOM05D000180 ORTHO05D000099 2.9e-06 56.2 129 34.1
Rhsim11G0189200 Rhododendron simsii HOM05D001375 ORTHO05D001222 2.9e-06 56.2 123 35.8
BcaC05g26195 Brassica carinata HOM05D000180 ORTHO05D000099 3.8e-06 55.8 154 27.3
C05p22000 Brassica napus HOM05D000180 ORTHO05D000099 3.8e-06 55.8 154 27.3
AUR62015319 Chenopodium quinoa HOM05D000180 ORTHO05D000099 3.8e-06 55.8 152 27.6
Ca_17236_v3 Cicer arietinum L. HOM05D008003 ORTHO05D010079 3.8e-06 55.8 98 33.7
COL.COLO4_07467 Corchorus olitorius HOM05D000180 ORTHO05D000099 3.8e-06 55.8 142 29.6
Psat0ss8330g0240 Pisum sativum HOM05D000180 ORTHO05D000099 3.8e-06 55.8 124 33.9
SMO367G1050 Selaginella moellendorffii HOM05D000180 ORTHO05D000099 3.8e-06 55.8 178 28.1
ATR0734G001 Amborella trichopoda HOM05D000180 ORTHO05D000099 5.0e-06 55.5 150 30.7
BolC5t30897H Brassica oleracea HOM05D000180 ORTHO05D000099 5.0e-06 55.5 154 27.3
CSS0048417 Camellia sinensis var. sinensis HOM05D000180 ORTHO05D000099 5.0e-06 55.5 139 33.1
CANSAT64G2100 Cannabis sativa HOM05D000180 ORTHO05D000099 5.0e-06 55.5 148 30.4
Duzib116G0363 Durio zibethinus HOM05D008003 ORTHO05D010079 5.0e-06 55.5 155 31.0
Eucgr.A02479 Eucalyptus grandis HOM05D000180 ORTHO05D000099 5.0e-06 55.5 129 33.3
Eucgr.A02485 Eucalyptus grandis HOM05D000180 ORTHO05D000099 5.0e-06 55.5 125 31.2
Prupe.8G265000 Prunus persica HOM05D008003 ORTHO05D010079 5.0e-06 55.5 97 32.0
QL11p049132 Quercus lobata HOM05D000180 ORTHO05D000099 5.0e-06 55.5 125 31.2
SEGI_25437 Sequoiadendron giganteum HOM05D000180 ORTHO05D000099 5.0e-06 55.5 130 33.1
SGA_v2.0_scaffold60G20862 Striga asiatica HOM05D000180 ORTHO05D000099 5.0e-06 55.5 155 27.1
ATR0003G002 Amborella trichopoda HOM05D000180 ORTHO05D000099 6.5e-06 55.1 127 33.1
ATR1186G001 Amborella trichopoda HOM05D000180 ORTHO05D000099 6.5e-06 55.1 150 30.7
FvH4_2g01680 Fragaria vesca HOM05D000180 ORTHO05D000099 6.5e-06 55.1 126 30.2
FAN24G2561 Fragaria x ananassa HOM05D000180 ORTHO05D000099 6.5e-06 55.1 126 30.2
Manes.06G081000 Manihot esculenta HOM05D000180 ORTHO05D000099 6.5e-06 55.1 178 24.7
Mapoly0078s0052 Marchantia polymorpha HOM05D029457 ORTHO05D048774 6.5e-06 55.1 105 31.4
Mapoly0135s0043 Marchantia polymorpha HOM05D010830 ORTHO05D013093 6.5e-06 55.1 148 31.1
RcHm_v2.0_Chr6g0244581 Rosa chinensis HOM05D000180 ORTHO05D000099 6.5e-06 55.1 152 30.9
RcHm_v2.0_Chr6g0294451 Rosa chinensis HOM05D008003 ORTHO05D010079 6.5e-06 55.1 146 27.4
SalBow6G0351 Salvia bowleyana HOM05D000180 ORTHO05D000099 6.5e-06 55.1 145 33.1
unitig_578.g16696 Utricularia gibba HOM05D000180 ORTHO05D000099 6.5e-06 55.1 128 35.9
Ah.13g075610 Amaranthus hybridus HOM05D000180 ORTHO05D000099 8.5e-06 54.7 153 30.7
COL.COLO4_32699 Corchorus olitorius HOM05D000180 ORTHO05D000099 8.5e-06 54.7 126 30.2
HanXRQChr01g0024971 Helianthus annuus HOM05D000180 ORTHO05D000099 8.5e-06 54.7 148 27.7
Mapoly0135s0042 Marchantia polymorpha HOM05D010830 ORTHO05D013093 8.5e-06 54.7 144 31.9
PSO541G1182 Papaver somniferum HOM05D000180 ORTHO05D000099 8.5e-06 54.7 129 30.2
SEGI_09751 Sequoiadendron giganteum HOM05D000180 ORTHO05D000099 8.5e-06 54.7 110 31.8
TPR.G25405 Trifolium pratense HOM05D000180 ORTHO05D000099 8.5e-06 54.7 124 33.9


User provided reference genes

Program Settings