Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0117s0014 Marchantia polymorpha HOM05D014630 ORTHO05D019289 2.5e-98 362.1 178 100.0
Mapoly0062s0101 Marchantia polymorpha HOM05D014630 ORTHO05D019289 8.0e-89 330.5 177 89.3
Mapoly0117s0013 Marchantia polymorpha HOM05D014630 ORTHO05D019289 1.7e-86 322.8 177 88.1
Mapoly0117s0015 Marchantia polymorpha HOM05D014630 ORTHO05D019289 1.9e-82 309.3 177 82.5
Mapoly0117s0016 Marchantia polymorpha HOM05D014630 ORTHO05D019289 2.2e-78 295.8 175 82.3
Mapoly0117s0017 Marchantia polymorpha HOM05D014630 ORTHO05D019289 2.7e-76 288.9 176 80.7
Mapoly0117s0018 Marchantia polymorpha HOM05D014630 ORTHO05D019289 1.0e-75 287.0 173 82.7
Mapoly0016s0063 Marchantia polymorpha HOM05D014630 ORTHO05D019289 2.0e-18 96.7 184 31.5
SEGI_17706 Sequoiadendron giganteum HOM05D000180 ORTHO05D000099 4.7e-12 75.5 159 34.6
Mapoly0078s0058 Marchantia polymorpha HOM05D014630 ORTHO05D000099 3.0e-11 72.8 145 36.6
Mapoly0006s0217 Marchantia polymorpha HOM05D014630 ORTHO05D000099 3.3e-10 69.3 158 32.9
SMO347G0300 Selaginella moellendorffii HOM05D000180 ORTHO05D000099 2.2e-09 66.6 141 33.3
SEGI_40814 Sequoiadendron giganteum HOM05D000180 ORTHO05D000099 2.8e-09 66.2 151 33.8
SalBow6G2900 Salvia bowleyana HOM05D000180 ORTHO05D000099 1.8e-08 63.5 144 29.9
Zm00001eb408210 Zea mays HOM05D000180 ORTHO05D000099 2.4e-08 63.2 149 34.2
FAN27G3186 Fragaria x ananassa HOM05D000180 ORTHO05D000099 4.1e-08 62.4 122 31.1
CSS0006406 Camellia sinensis var. sinensis HOM05D000180 ORTHO05D000099 5.3e-08 62.0 191 29.3
SalBow1G0434 Salvia bowleyana HOM05D000180 ORTHO05D000099 1.2e-07 60.8 143 28.7
PSO541G0252 Papaver somniferum HOM05D000180 ORTHO05D000099 1.6e-07 60.5 137 31.4
ATR0081G048 Amborella trichopoda HOM05D000180 ORTHO05D000099 2.0e-07 60.1 141 31.9
Os03g0400200 Oryza sativa ssp. japonica HOM05D000180 ORTHO05D000099 2.6e-07 59.7 173 30.6
SalBow1G4753 Salvia bowleyana HOM05D000180 ORTHO05D000099 2.6e-07 59.7 179 27.9
CSS0048417 Camellia sinensis var. sinensis HOM05D000180 ORTHO05D000099 3.5e-07 59.3 152 32.2
PSO675G6155 Papaver somniferum HOM05D000180 ORTHO05D000099 3.5e-07 59.3 137 32.1
PSO675G7216 Papaver somniferum HOM05D000180 ORTHO05D000099 3.5e-07 59.3 138 31.9
SEGI_27732 Sequoiadendron giganteum HOM05D000180 ORTHO05D000099 3.5e-07 59.3 158 29.7
Zm00001eb408140 Zea mays HOM05D000180 ORTHO05D000099 3.5e-07 59.3 149 32.9
Eucgr.A02487 Eucalyptus grandis HOM05D000180 ORTHO05D000099 4.5e-07 58.9 120 33.3
SEGI_11991 Sequoiadendron giganteum HOM05D000180 ORTHO05D000099 4.5e-07 58.9 162 30.2
Ah.12g065140 Amaranthus hybridus HOM05D000180 ORTHO05D000099 5.9e-07 58.5 157 25.5
ECA248G3820 Erigeron canadensis HOM05D000180 ORTHO05D000099 5.9e-07 58.5 143 28.7
PSO541G1206 Papaver somniferum HOM05D000180 ORTHO05D000099 5.9e-07 58.5 139 33.1
PSO541G1921 Papaver somniferum HOM05D000180 ORTHO05D000099 5.9e-07 58.5 154 30.5
CANSAT64G1957 Cannabis sativa HOM05D000180 ORTHO05D000099 7.7e-07 58.2 193 27.5
VMungo0331G1833 Vigna mungo HOM05D000180 ORTHO05D000099 7.7e-07 58.2 179 26.8
GSVIVG01009625001 Vitis vinifera HOM05D000499 ORTHO05D007471 7.7e-07 58.2 180 26.7
ATR0081G021 Amborella trichopoda HOM05D000180 ORTHO05D000099 1.0e-06 57.8 141 30.5
ATR0810G002 Amborella trichopoda HOM05D000180 ORTHO05D000099 1.0e-06 57.8 124 29.8
BcaC05g26195 Brassica carinata HOM05D000180 ORTHO05D000099 1.0e-06 57.8 151 29.1
C05p22000 Brassica napus HOM05D000180 ORTHO05D000099 1.0e-06 57.8 151 29.1
CDE07G1183 Ceratophyllum demersum HOM05D000180 ORTHO05D000099 1.3e-06 57.4 143 25.2
COL.COLO4_17291 Corchorus olitorius HOM05D000180 ORTHO05D000099 1.3e-06 57.4 122 27.9
DCAR_031097 Daucus carota HOM05D000180 ORTHO05D000099 1.3e-06 57.4 178 28.7
Gohir.D09G016100 Gossypium hirsutum HOM05D000180 ORTHO05D000099 1.3e-06 57.4 163 25.2
HanXRQChr02g0034571 Helianthus annuus HOM05D000180 ORTHO05D000099 1.3e-06 57.4 143 29.4
Hma1.2p1_0260F.1_g104350 Hydrangea macrophylla HOM05D008003 ORTHO05D010079 1.3e-06 57.4 173 30.1
PSO541G0521 Papaver somniferum HOM05D000180 ORTHO05D000099 1.3e-06 57.4 138 30.4
RcHm_v2.0_Chr6g0294451 Rosa chinensis HOM05D008003 ORTHO05D010079 1.3e-06 57.4 158 27.8
SalBow6G0351 Salvia bowleyana HOM05D000180 ORTHO05D000099 1.3e-06 57.4 171 31.6
SEGI_30918 Sequoiadendron giganteum HOM05D000180 ORTHO05D000099 1.3e-06 57.4 143 32.9
Atru.chr12.436 Acer truncatum HOM05D000180 ORTHO05D000099 1.7e-06 57.0 161 27.3
ATR0810G154 Amborella trichopoda HOM05D000180 ORTHO05D000099 1.7e-06 57.0 149 34.2
BolC5t30897H Brassica oleracea HOM05D000180 ORTHO05D000099 1.7e-06 57.0 151 29.1
Duzib116G0363 Durio zibethinus HOM05D008003 ORTHO05D010079 1.7e-06 57.0 171 27.5
Nitab4.5_0000321g0020 Nicotiana tabacum HOM05D000180 ORTHO05D000099 1.7e-06 57.0 135 30.4
PSO675G6564 Papaver somniferum HOM05D000180 ORTHO05D000099 1.7e-06 57.0 123 32.5
Phvul.010G063600 Phaseolus vulgaris HOM05D000180 ORTHO05D000099 1.7e-06 57.0 182 26.4
SGA_v2.0_scaffold207G41896 Striga asiatica HOM05D000180 ORTHO05D000099 1.7e-06 57.0 133 30.8
ATR0810G295 Amborella trichopoda HOM05D000180 ORTHO05D000099 2.2e-06 56.6 124 29.8
Thhalv10006492m.g Eutrema salsugineum HOM05D000180 ORTHO05D000099 2.2e-06 56.6 176 27.8
HanXRQChr01g0024971 Helianthus annuus HOM05D000180 ORTHO05D000099 2.2e-06 56.6 143 26.6
HanXRQChr02g0043641 Helianthus annuus HOM05D000180 ORTHO05D000099 2.2e-06 56.6 155 30.3
PSO541G1182 Papaver somniferum HOM05D000180 ORTHO05D000099 2.2e-06 56.6 150 29.3
MSTRG.5439 Avicennia marina HOM05D000180 ORTHO05D000099 2.9e-06 56.2 143 29.4
HanXRQChr01g0024961 Helianthus annuus HOM05D000180 ORTHO05D000099 2.9e-06 56.2 122 32.0
Mapoly0078s0052 Marchantia polymorpha HOM05D029457 ORTHO05D048774 2.9e-06 56.2 124 29.8
PSO675G5682 Papaver somniferum HOM05D000180 ORTHO05D000099 2.9e-06 56.2 122 32.0
QL02p007150 Quercus lobata HOM05D008003 ORTHO05D010079 2.9e-06 56.2 164 23.2
QL11p049132 Quercus lobata HOM05D000180 ORTHO05D000099 2.9e-06 56.2 133 31.6
unitig_578.g16696 Utricularia gibba HOM05D000180 ORTHO05D000099 2.9e-06 56.2 124 37.1
Cpa.g.sc64.35 Carica papaya HOM05D008003 ORTHO05D010079 3.8e-06 55.8 136 25.0
Cfa009619 Carpinus fangiana HOM05D000180 ORTHO05D000099 3.8e-06 55.8 163 25.8
Eucgr.A02479 Eucalyptus grandis HOM05D000180 ORTHO05D000099 3.8e-06 55.8 121 33.1
FvH4_2g01680 Fragaria vesca HOM05D000180 ORTHO05D000099 3.8e-06 55.8 158 26.6
FAN24G2561 Fragaria x ananassa HOM05D000180 ORTHO05D000099 3.8e-06 55.8 158 26.6
Gorai.006G018400 Gossypium raimondii HOM05D000180 ORTHO05D000099 3.8e-06 55.8 163 24.5
PSO541G0854 Papaver somniferum HOM05D000180 ORTHO05D000099 3.8e-06 55.8 137 31.4
Ah.13g075610 Amaranthus hybridus HOM05D000180 ORTHO05D000099 5.0e-06 55.5 122 32.8
ATR0810G065 Amborella trichopoda HOM05D000180 ORTHO05D000099 5.0e-06 55.5 123 30.9
ATR0810G273 Amborella trichopoda HOM05D000180 ORTHO05D000099 5.0e-06 55.5 148 33.1
CANSAT64G1873 Cannabis sativa HOM05D000180 ORTHO05D000099 5.0e-06 55.5 134 32.8
Gohir.A01G156000 Gossypium hirsutum HOM05D000180 ORTHO05D000099 5.0e-06 55.5 174 24.1
Gohir.D09G016200 Gossypium hirsutum HOM05D000180 ORTHO05D000099 5.0e-06 55.5 163 25.2
Rhsim07G0062500 Rhododendron simsii HOM05D000180 ORTHO05D000099 5.0e-06 55.5 159 27.0
SMO147G0293 Selaginella moellendorffii HOM05D000180 ORTHO05D000099 5.0e-06 55.5 126 28.6
TAR381G1448 Trochodendron aralioides HOM05D000180 ORTHO05D000099 5.0e-06 55.5 143 30.1
ATR0810G236 Amborella trichopoda HOM05D000180 ORTHO05D000099 6.5e-06 55.1 123 30.9
CSS0020163 Camellia sinensis var. sinensis HOM05D000180 ORTHO05D000099 6.5e-06 55.1 151 31.1
Cfa009617 Carpinus fangiana HOM05D000180 ORTHO05D000099 6.5e-06 55.1 163 27.0
Cfa018459 Carpinus fangiana HOM05D008003 ORTHO05D010079 6.5e-06 55.1 160 25.6
COL.COLO4_30584 Corchorus olitorius HOM05D000180 ORTHO05D000099 6.5e-06 55.1 149 26.8
HanXRQChr01g0024951 Helianthus annuus HOM05D000180 ORTHO05D000099 6.5e-06 55.1 122 31.1
Oeu001389.1 Olea europaea HOM05D000180 ORTHO05D000099 6.5e-06 55.1 143 28.0
Prupe.8G265000 Prunus persica HOM05D008003 ORTHO05D010079 6.5e-06 55.1 98 33.7
QL11p048553 Quercus lobata HOM05D000180 ORTHO05D000099 6.5e-06 55.1 133 30.8
SalBow6G6800 Salvia bowleyana HOM05D000180 ORTHO05D000099 6.5e-06 55.1 126 31.7
SEGI_25437 Sequoiadendron giganteum HOM05D000180 ORTHO05D000099 6.5e-06 55.1 129 31.0
TAR381G0411 Trochodendron aralioides HOM05D000180 ORTHO05D000099 6.5e-06 55.1 122 34.4
AagrBONN_evm.TU.Sc2ySwM_344.2528 Anthoceros agrestis HOM05D019072 ORTHO05D000099 8.5e-06 54.7 147 30.6
Cc04_g12510 Coffea canephora HOM05D000180 ORTHO05D000099 8.5e-06 54.7 154 29.9
COL.COLO4_07467 Corchorus olitorius HOM05D000180 ORTHO05D000099 8.5e-06 54.7 134 26.9
FAN09G1602 Fragaria x ananassa HOM05D000180 ORTHO05D000099 8.5e-06 54.7 134 32.1
Glyma.03G044500 Glycine max HOM05D000180 ORTHO05D000099 8.5e-06 54.7 175 25.7
Nitab4.5_0003884g0080 Nicotiana tabacum HOM05D008003 ORTHO05D010079 8.5e-06 54.7 156 25.6
SalBow6G0798 Salvia bowleyana HOM05D000180 ORTHO05D000099 8.5e-06 54.7 131 32.1
SMO331G0078 Selaginella moellendorffii HOM05D000180 ORTHO05D000099 8.5e-06 54.7 126 27.8
SMO367G0602 Selaginella moellendorffii HOM05D000180 ORTHO05D000099 8.5e-06 54.7 124 31.5
SEGI_15552 Sequoiadendron giganteum HOM05D000180 ORTHO05D000099 8.5e-06 54.7 126 31.7
unitig_52.g17776 Utricularia gibba HOM05D000180 ORTHO05D000099 8.5e-06 54.7 173 24.9


User provided reference genes

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