Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0117s0013 Marchantia polymorpha HOM05D014630 ORTHO05D019289 9.4e-101 370.2 183 100.0
Mapoly0062s0101 Marchantia polymorpha HOM05D014630 ORTHO05D019289 2.2e-94 349.0 183 94.0
Mapoly0117s0014 Marchantia polymorpha HOM05D014630 ORTHO05D019289 1.7e-86 322.8 177 88.1
Mapoly0117s0016 Marchantia polymorpha HOM05D014630 ORTHO05D019289 1.3e-81 306.6 176 86.9
Mapoly0117s0015 Marchantia polymorpha HOM05D014630 ORTHO05D019289 1.6e-79 299.7 176 79.5
Mapoly0117s0017 Marchantia polymorpha HOM05D014630 ORTHO05D019289 2.6e-74 282.3 180 77.2
Mapoly0117s0018 Marchantia polymorpha HOM05D014630 ORTHO05D019289 2.9e-73 278.9 173 79.8
Mapoly0016s0063 Marchantia polymorpha HOM05D014630 ORTHO05D019289 2.8e-20 102.8 187 34.2
Mapoly0078s0058 Marchantia polymorpha HOM05D014630 ORTHO05D000099 1.5e-10 70.5 138 37.0
Mapoly0006s0217 Marchantia polymorpha HOM05D014630 ORTHO05D000099 3.4e-10 69.3 158 33.5
SEGI_17706 Sequoiadendron giganteum HOM05D000180 ORTHO05D000099 7.7e-10 68.2 155 33.5
FAN27G3186 Fragaria x ananassa HOM05D000180 ORTHO05D000099 6.5e-09 65.1 122 32.8
SMO347G0300 Selaginella moellendorffii HOM05D000180 ORTHO05D000099 1.1e-08 64.3 135 34.1
SEGI_40814 Sequoiadendron giganteum HOM05D000180 ORTHO05D000099 4.2e-08 62.4 128 32.0
CSS0006406 Camellia sinensis var. sinensis HOM05D000180 ORTHO05D000099 5.5e-08 62.0 151 31.8
FvH4_7g31480 Fragaria vesca HOM05D000180 ORTHO05D000099 5.5e-08 62.0 154 29.2
Os03g0400200 Oryza sativa ssp. japonica HOM05D000180 ORTHO05D000099 7.2e-08 61.6 150 30.7
ATR0810G002 Amborella trichopoda HOM05D000180 ORTHO05D000099 9.4e-08 61.2 124 30.6
SalBow6G2900 Salvia bowleyana HOM05D000180 ORTHO05D000099 9.4e-08 61.2 144 28.5
Eucgr.A02487 Eucalyptus grandis HOM05D000180 ORTHO05D000099 1.2e-07 60.8 120 33.3
Os07g0617500 Oryza sativa ssp. japonica HOM05D000180 ORTHO05D000099 1.2e-07 60.8 152 30.9
ATR0810G154 Amborella trichopoda HOM05D000180 ORTHO05D000099 1.6e-07 60.5 187 31.0
ATR0810G295 Amborella trichopoda HOM05D000180 ORTHO05D000099 1.6e-07 60.5 124 30.6
SEGI_25437 Sequoiadendron giganteum HOM05D000180 ORTHO05D000099 1.6e-07 60.5 162 27.8
VMungo0331G1833 Vigna mungo HOM05D000180 ORTHO05D000099 1.6e-07 60.5 153 26.8
Zm00001eb408140 Zea mays HOM05D000180 ORTHO05D000099 1.6e-07 60.5 144 31.9
Zm00001eb408210 Zea mays HOM05D000180 ORTHO05D000099 1.6e-07 60.5 144 31.9
PSO541G0521 Papaver somniferum HOM05D000180 ORTHO05D000099 2.1e-07 60.1 138 30.4
Ah.12g065140 Amaranthus hybridus HOM05D000180 ORTHO05D000099 3.6e-07 59.3 157 25.5
ATR0081G048 Amborella trichopoda HOM05D000180 ORTHO05D000099 3.6e-07 59.3 141 31.9
PSO541G1921 Papaver somniferum HOM05D000180 ORTHO05D000099 3.6e-07 59.3 123 33.3
PSO675G7216 Papaver somniferum HOM05D000180 ORTHO05D000099 3.6e-07 59.3 138 30.4
CSS0048417 Camellia sinensis var. sinensis HOM05D000180 ORTHO05D000099 4.6e-07 58.9 151 31.8
ECA248G3820 Erigeron canadensis HOM05D000180 ORTHO05D000099 4.6e-07 58.9 144 31.2
SMO147G0293 Selaginella moellendorffii HOM05D000180 ORTHO05D000099 4.6e-07 58.9 126 29.4
AagrBONN_evm.TU.Sc2ySwM_344.2528 Anthoceros agrestis HOM05D019072 ORTHO05D000099 6.1e-07 58.5 188 27.1
COL.COLO4_30591 Corchorus olitorius HOM05D000180 ORTHO05D000099 6.1e-07 58.5 149 27.5
Os10g0398100 Oryza sativa ssp. japonica HOM05D000180 ORTHO05D000099 6.1e-07 58.5 185 24.3
SMO331G0078 Selaginella moellendorffii HOM05D000180 ORTHO05D000099 6.1e-07 58.5 126 27.8
ATR0810G065 Amborella trichopoda HOM05D000180 ORTHO05D000099 7.9e-07 58.2 123 31.7
ATR0810G273 Amborella trichopoda HOM05D000180 ORTHO05D000099 7.9e-07 58.2 145 32.4
BcaC05g26195 Brassica carinata HOM05D000180 ORTHO05D000099 7.9e-07 58.2 174 25.9
C05p22000 Brassica napus HOM05D000180 ORTHO05D000099 7.9e-07 58.2 174 25.9
PSO675G6564 Papaver somniferum HOM05D000180 ORTHO05D000099 7.9e-07 58.2 123 32.5
SalBow6G0351 Salvia bowleyana HOM05D000180 ORTHO05D000099 7.9e-07 58.2 145 33.1
Aa31LG10G12810 Aethionema arabicum HOM05D000180 ORTHO05D000099 1.0e-06 57.8 127 31.5
BolC5t30897H Brassica oleracea HOM05D000180 ORTHO05D000099 1.0e-06 57.8 174 25.9
FvH4_2g01680 Fragaria vesca HOM05D000180 ORTHO05D000099 1.0e-06 57.8 122 32.0
FAN06G0338 Fragaria x ananassa HOM05D000180 ORTHO05D000099 1.0e-06 57.8 135 30.4
FAN06G1956 Fragaria x ananassa HOM05D000180 ORTHO05D000099 1.0e-06 57.8 135 30.4
FAN24G2561 Fragaria x ananassa HOM05D000180 ORTHO05D000099 1.0e-06 57.8 122 32.0
Rhsim07G0062500 Rhododendron simsii HOM05D000180 ORTHO05D000099 1.0e-06 57.8 159 26.4
SEGI_15709 Sequoiadendron giganteum HOM05D000180 ORTHO05D000099 1.0e-06 57.8 153 28.8
CARHR023260 Cardamine hirsuta HOM05D000180 ORTHO05D000099 1.4e-06 57.4 155 29.0
ATR0081G021 Amborella trichopoda HOM05D000180 ORTHO05D000099 1.8e-06 57.0 141 30.5
ATR0810G236 Amborella trichopoda HOM05D000180 ORTHO05D000099 1.8e-06 57.0 123 30.9
HanXRQChr02g0043641 Helianthus annuus HOM05D000180 ORTHO05D000099 1.8e-06 57.0 154 28.6
Hma1.2p1_0260F.1_g104350 Hydrangea macrophylla HOM05D008003 ORTHO05D010079 1.8e-06 57.0 171 29.8
PSO541G1182 Papaver somniferum HOM05D000180 ORTHO05D000099 1.8e-06 57.0 162 29.0
SEGI_28710 Sequoiadendron giganteum HOM05D000180 ORTHO05D000099 1.8e-06 57.0 122 32.8
SGA_v2.0_scaffold207G41896 Striga asiatica HOM05D000180 ORTHO05D000099 1.8e-06 57.0 131 29.8
ECA248G2189 Erigeron canadensis HOM05D000180 ORTHO05D000099 2.3e-06 56.6 122 33.6
PSO675G5682 Papaver somniferum HOM05D000180 ORTHO05D000099 2.3e-06 56.6 162 29.0
SEGI_15552 Sequoiadendron giganteum HOM05D000180 ORTHO05D000099 2.3e-06 56.6 122 32.8
SEGI_30918 Sequoiadendron giganteum HOM05D000180 ORTHO05D000099 2.3e-06 56.6 146 33.6
Gohir.A12G184300 Gossypium hirsutum HOM05D000180 ORTHO05D000099 3.0e-06 56.2 150 30.0
SMO367G0602 Selaginella moellendorffii HOM05D000180 ORTHO05D000099 3.0e-06 56.2 138 31.9
Atru.chr12.436 Acer truncatum HOM05D000180 ORTHO05D000099 3.9e-06 55.8 143 28.7
CSS0020163 Camellia sinensis var. sinensis HOM05D000180 ORTHO05D000099 3.9e-06 55.8 151 31.8
COL.COLO4_07467 Corchorus olitorius HOM05D000180 ORTHO05D000099 3.9e-06 55.8 137 27.7
PSO541G1206 Papaver somniferum HOM05D000180 ORTHO05D000099 3.9e-06 55.8 139 30.9
PSO541G2644 Papaver somniferum HOM05D000180 ORTHO05D000099 3.9e-06 55.8 157 28.7
Phvul.010G063600 Phaseolus vulgaris HOM05D000180 ORTHO05D000099 3.9e-06 55.8 153 26.1
Psat0ss8330g0240 Pisum sativum HOM05D000180 ORTHO05D000099 3.9e-06 55.8 124 34.7
COL.COLO4_17291 Corchorus olitorius HOM05D000180 ORTHO05D000099 5.1e-06 55.5 122 27.0
Mapoly0078s0052 Marchantia polymorpha HOM05D029457 ORTHO05D048774 5.1e-06 55.5 105 30.5
PSO541G0252 Papaver somniferum HOM05D000180 ORTHO05D000099 5.1e-06 55.5 137 29.2
QL02p007150 Quercus lobata HOM05D008003 ORTHO05D010079 5.1e-06 55.5 88 36.4
Rhsim11G0189200 Rhododendron simsii HOM05D001375 ORTHO05D001222 5.1e-06 55.5 126 34.9
RcHm_v2.0_Chr2g0158911 Rosa chinensis HOM05D000180 ORTHO05D000099 5.1e-06 55.5 147 28.6
SalBow1G0434 Salvia bowleyana HOM05D000180 ORTHO05D000099 5.1e-06 55.5 143 26.6
SalBow6G5590 Salvia bowleyana HOM05D000180 ORTHO05D000099 5.1e-06 55.5 153 32.0
TAR536G0017 Trochodendron aralioides HOM05D000180 ORTHO05D000099 5.1e-06 55.5 141 30.5
GSVIVG01009625001 Vitis vinifera HOM05D000499 ORTHO05D007471 5.1e-06 55.5 100 36.0
Zm00001eb124210 Zea mays HOM05D000180 ORTHO05D000099 5.1e-06 55.5 148 31.1
CARHR168410 Cardamine hirsuta HOM05D000180 ORTHO05D000099 6.7e-06 55.1 121 28.9
Ca_06405_v3 Cicer arietinum L. HOM05D000180 ORTHO05D000099 6.7e-06 55.1 130 32.3
FAN15G0373 Fragaria x ananassa HOM05D000180 ORTHO05D000099 6.7e-06 55.1 122 31.1
PSO675G6155 Papaver somniferum HOM05D000180 ORTHO05D000099 6.7e-06 55.1 137 29.2
SalBow1G4753 Salvia bowleyana HOM05D000180 ORTHO05D000099 6.7e-06 55.1 161 26.7
SEGI_27732 Sequoiadendron giganteum HOM05D000180 ORTHO05D000099 6.7e-06 55.1 163 28.2
Ca_06404_v3 Cicer arietinum L. HOM05D000180 ORTHO05D000099 8.8e-06 54.7 130 32.3
MBI09_g25279_MAGBIO Magnolia biondii HOM05D000180 ORTHO05D000099 8.8e-06 54.7 134 29.9
SEGI_11991 Sequoiadendron giganteum HOM05D000180 ORTHO05D000099 8.8e-06 54.7 148 31.8
TPR.G25405 Trifolium pratense HOM05D000180 ORTHO05D000099 8.8e-06 54.7 124 34.7
TAR536G0012 Trochodendron aralioides HOM05D000180 ORTHO05D000099 8.8e-06 54.7 123 32.5


User provided reference genes

Program Settings