Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0117s0004 Marchantia polymorpha HOM05D001568 ORTHO05D009161 3.8e-199 698.0 356 100.0
AagrBONN_evm.TU.Sc2ySwM_117.3519 Anthoceros agrestis HOM05D001568 ORTHO05D009161 1.9e-52 210.7 145 66.9
SEGI_07672 Sequoiadendron giganteum HOM05D001568 ORTHO05D009161 7.1e-44 182.2 136 58.1
CBR_g38178 Chara braunii HOM05D001568 ORTHO05D009161 1.1e-41 174.9 160 54.4
ATR0739G196 Amborella trichopoda HOM05D001568 ORTHO05D009161 1.5e-38 164.5 142 54.2
PSO541G2903 Papaver somniferum HOM05D001568 ORTHO05D009161 1.1e-36 158.3 133 54.9
vmacro22256 Vaccinium macrocarpon HOM05D001568 ORTHO05D009161 2.4e-36 157.1 133 54.9
CDE07G0917 Ceratophyllum demersum HOM05D001568 ORTHO05D009161 3.2e-36 156.8 133 55.6
PSO675G4557 Papaver somniferum HOM05D001568 ORTHO05D009161 3.2e-36 156.8 133 54.1
Prupe.8G149700 Prunus persica HOM05D001568 ORTHO05D009161 3.2e-36 156.8 159 50.3
THA.LOC104804397 Tarenaya hassleriana HOM05D001568 ORTHO05D009161 3.2e-36 156.8 133 54.9
A07p05700 Brassica napus HOM05D001568 ORTHO05D009161 4.2e-36 156.4 134 56.0
A07p05850 Brassica napus HOM05D001568 ORTHO05D009161 4.2e-36 156.4 134 56.0
BraA07t28378Z Brassica rapa HOM05D001568 ORTHO05D009161 4.2e-36 156.4 134 56.0
Thhalv10023010m.g Eutrema salsugineum HOM05D001568 ORTHO05D009161 7.1e-36 155.6 134 56.0
Prupe.8G150000 Prunus persica HOM05D001568 ORTHO05D009161 1.2e-35 154.8 149 51.7
BcaC06g36001 Brassica carinata HOM05D001568 ORTHO05D009161 1.6e-35 154.5 134 55.2
C07p09120 Brassica napus HOM05D001568 ORTHO05D009161 1.6e-35 154.5 134 55.2
BolC7t41323H Brassica oleracea HOM05D001568 ORTHO05D009161 1.6e-35 154.5 134 55.2
BraA07t28366Z Brassica rapa HOM05D001568 ORTHO05D009161 1.6e-35 154.5 135 54.8
Nitab4.5_0011705g0020 Nicotiana tabacum HOM05D001568 ORTHO05D009161 1.6e-35 154.5 133 54.9
CiPaw.06G164200 Carya illinoinensis HOM05D001568 ORTHO05D009161 2.7e-35 153.7 133 56.4
Rhsim05G0092800 Rhododendron simsii HOM05D001568 ORTHO05D009161 2.7e-35 153.7 133 55.6
Carub.0003s2869 Capsella rubella HOM05D001568 ORTHO05D009161 3.5e-35 153.3 133 54.9
Nitab4.5_0001458g0020 Nicotiana tabacum HOM05D001568 ORTHO05D009161 3.5e-35 153.3 133 55.6
Pp3c10_11040 Physcomitrium patens HOM05D001568 ORTHO05D009161 4.6e-35 152.9 247 37.2
Sp3g27770 Schrenkiella parvula HOM05D001568 ORTHO05D009161 4.6e-35 152.9 133 56.4
unitig_0.g633 Utricularia gibba HOM05D001568 ORTHO05D009161 7.8e-35 152.1 134 54.5
MD10G1109900 Malus domestica HOM05D001568 ORTHO05D009161 1.0e-34 151.8 133 53.4
PSO541G3645 Papaver somniferum HOM05D001568 ORTHO05D009161 1.0e-34 151.8 142 50.7
Duzib132G0829 Durio zibethinus HOM05D001568 ORTHO05D009161 1.3e-34 151.4 133 52.6
FvH4_2g03390 Fragaria vesca HOM05D001568 ORTHO05D009161 1.7e-34 151.0 133 51.9
RcHm_v2.0_Chr6g0248511 Rosa chinensis HOM05D001568 ORTHO05D009161 1.7e-34 151.0 152 50.0
Nn5g30651 Nelumbo nucifera HOM05D001568 ORTHO05D009161 2.3e-34 150.6 146 50.7
Migut.B00461 Erythranthe guttata HOM05D001568 ORTHO05D009161 3.0e-34 150.2 134 52.2
FAN15G0831 Fragaria x ananassa HOM05D001568 ORTHO05D009161 3.0e-34 150.2 133 51.1
Sc01g0002530 Simmondsia chinensis HOM05D001568 ORTHO05D009161 3.0e-34 150.2 133 54.9
SGA_v2.0_scaffold32G12987 Striga asiatica HOM05D001568 ORTHO05D009161 3.0e-34 150.2 134 53.0
MSTRG.20237 Avicennia marina HOM05D001568 ORTHO05D009161 3.9e-34 149.8 134 53.0
Cc00_g18000 Coffea canephora HOM05D001568 ORTHO05D009161 3.9e-34 149.8 133 53.4
FAN24G0656 Fragaria x ananassa HOM05D001568 ORTHO05D009161 3.9e-34 149.8 133 51.1
FAN27G2772 Fragaria x ananassa HOM05D001568 ORTHO05D009161 3.9e-34 149.8 133 51.9
QL11p029372 Quercus lobata HOM05D001568 ORTHO05D009161 3.9e-34 149.8 133 55.6
CARHR286340 Cardamine hirsuta HOM05D001568 ORTHO05D009161 6.6e-34 149.1 133 54.1
FvH4_2g03350 Fragaria vesca HOM05D001568 ORTHO05D009161 6.6e-34 149.1 133 51.1
Aa31LG8G12780 Aethionema arabicum HOM05D006229 ORTHO05D007190 8.7e-34 148.7 133 51.1
AL3G46300 Arabidopsis lyrata HOM05D001568 ORTHO05D009161 8.7e-34 148.7 134 55.2
Thecc.02G119600 Theobroma cacao HOM05D001568 ORTHO05D009161 8.7e-34 148.7 153 48.4
BcaB05g22586 Brassica carinata HOM05D001568 ORTHO05D009161 1.1e-33 148.3 135 55.6
Gorai.013G051500 Gossypium raimondii HOM05D001568 ORTHO05D009161 1.1e-33 148.3 133 51.9
Cfa004703 Carpinus fangiana HOM05D001568 ORTHO05D009161 1.5e-33 147.9 140 54.3
Duzib248G0869 Durio zibethinus HOM05D001568 ORTHO05D009161 1.5e-33 147.9 133 51.9
Gohir.A13G047700 Gossypium hirsutum HOM05D001568 ORTHO05D009161 1.5e-33 147.9 133 51.9
Gohir.D13G046000 Gossypium hirsutum HOM05D001568 ORTHO05D009161 1.5e-33 147.9 133 51.9
CANSAT25G2862 Cannabis sativa HOM05D001568 ORTHO05D009161 1.9e-33 147.5 133 51.1
MBI16_g39097_MAGBIO Magnolia biondii HOM05D001568 ORTHO05D009161 1.9e-33 147.5 132 53.0
TAR625G0338 Trochodendron aralioides HOM05D001568 ORTHO05D009161 1.9e-33 147.5 150 50.7
MELO3C018021.2 Cucumis melo HOM05D001568 ORTHO05D009161 2.5e-33 147.1 178 44.9
ClCG10G010070 Citrullus lanatus HOM05D001568 ORTHO05D009161 3.3e-33 146.7 162 47.5
Dinv09541 Davidia involucrata HOM05D001568 ORTHO05D008804 3.3e-33 146.7 133 53.4
AT2G14660 Arabidopsis thaliana HOM05D001568 ORTHO05D009161 4.3e-33 146.4 135 51.9
COL.COLO4_32488 Corchorus olitorius HOM05D001568 ORTHO05D009161 4.3e-33 146.4 136 49.3
EL10Ac1g00245 Beta vulgaris HOM05D001568 ORTHO05D009161 7.3e-33 145.6 134 54.5
Peaxi162Scf00003g02812 Petunia axillaris HOM05D001568 ORTHO05D009161 7.3e-33 145.6 133 54.9
Potri.009G085700 Populus trichocarpa HOM05D001568 ORTHO05D009161 1.3e-32 144.8 133 51.9
Solyc10g048190.1 Solanum lycopersicum HOM05D001568 ORTHO05D009161 1.3e-32 144.8 133 51.1
Lsat_1_v5_gn_5_117140 Lactuca sativa HOM05D001568 ORTHO05D009161 1.6e-32 144.4 166 48.8
Aqoxy5G00361 Aquilegia oxysepala HOM05D001568 ORTHO05D009161 2.1e-32 144.1 133 51.9
Manes.10G086600 Manihot esculenta HOM05D001568 ORTHO05D009161 3.6e-32 143.3 164 43.9
Cpa.g.sc91.59 Carica papaya HOM05D001568 ORTHO05D009161 4.8e-32 142.9 134 51.5
Ciclev10030269m.g Citrus clementina HOM05D001568 ORTHO05D008804 4.8e-32 142.9 133 51.9
HanXRQChr10g0305111 Helianthus annuus HOM05D001568 ORTHO05D009161 4.8e-32 142.9 133 50.4
HPP92_026656 Vanilla planifolia HOM05D001568 ORTHO05D009161 4.8e-32 142.9 135 51.9
Sabra09G0065800 Salix brachista HOM05D001568 ORTHO05D009161 6.2e-32 142.5 133 51.1
HPP92_015706 Vanilla planifolia HOM05D001568 ORTHO05D009161 6.2e-32 142.5 135 51.9
Atru.chr5.2303 Acer truncatum HOM05D001568 ORTHO05D009161 8.1e-32 142.1 133 51.9
Actinidia27999 Actinidia chinensis HOM05D001568 ORTHO05D009161 8.1e-32 142.1 129 54.3
SHI05019 Sapria himalayana HOM05D001568 ORTHO05D009161 8.1e-32 142.1 140 50.0
CsaV3_4G000110 Cucumis sativus L. HOM05D001568 ORTHO05D009161 2.4e-31 140.6 197 42.1
CAN.G1427.5 Capsicum annuum HOM05D001568 ORTHO05D009161 3.1e-31 140.2 133 50.4
Ah.08g217180 Amaranthus hybridus HOM05D001035 ORTHO05D001045 4.0e-31 139.8 135 53.3
Lalb_Chr20g0110071 Lupinus albus HOM05D001568 ORTHO05D009161 9.0e-31 138.7 145 44.8
TWI59G0351 Tripterygium wilfordii HOM05D001568 ORTHO05D009161 1.5e-30 137.9 135 50.4
PGSC0003DMG400012841 Solanum tuberosum HOM05D001568 ORTHO05D009161 2.0e-30 137.5 132 48.5
PGR142G3835 Punica granatum HOM05D001568 ORTHO05D009161 4.5e-30 136.3 135 49.6
TWI23G0417 Tripterygium wilfordii HOM05D001568 ORTHO05D009161 2.9e-29 133.7 135 47.4
Medtr5g005350 Medicago truncatula HOM05D001568 ORTHO05D009161 3.8e-29 133.3 132 50.0
Sed0014293 Sechium edule HOM05D001568 ORTHO05D009161 4.9e-29 132.9 134 47.8
Lj1g0027535 Lotus japonicus HOM05D001568 ORTHO05D009161 6.4e-29 132.5 134 49.3
Glyma.01G241600 Glycine max HOM05D001568 ORTHO05D009161 3.2e-28 130.2 132 48.5
TPR.G8318 Trifolium pratense HOM05D001568 ORTHO05D009161 9.3e-28 128.6 132 48.5
VMungo1215G1258 Vigna mungo HOM05D001568 ORTHO05D009161 2.1e-27 127.5 132 48.5
MBI16_g27033_MAGBIO Magnolia biondii HOM05D001568 ORTHO05D009161 2.3e-26 124.0 131 48.1
Phvul.002G050900 Phaseolus vulgaris HOM05D001568 ORTHO05D009161 3.9e-26 123.2 132 47.0
Zm00001eb217400 Zea mays HOM05D001568 ORTHO05D009161 8.7e-26 122.1 140 45.0
CSS0003584 Camellia sinensis var. sinensis HOM05D001568 ORTHO05D009161 3.3e-25 120.2 133 47.4
Os03g0676100 Oryza sativa ssp. japonica HOM05D001568 ORTHO05D009161 2.1e-24 117.5 145 42.8
Lj9P337T35 Lonicera japonica HOM05D001568 ORTHO05D009161 9.0e-23 112.1 103 49.5
MCO07G364 Micromonas commoda HOM05D001568 ORTHO05D009161 5.5e-20 102.8 190 35.3
AUR62004510 Chenopodium quinoa HOM05D001568 ORTHO05D009161 3.9e-18 96.7 93 57.0
Medtr8g027785 Medicago truncatula HOM05D001568 ORTHO05D009161 3.9e-18 96.7 132 40.9
AUR62023444 Chenopodium quinoa HOM05D001568 ORTHO05D009161 5.1e-18 96.3 93 57.0
Cre12.g497650 Chlamydomonas reinhardtii HOM05D001568 ORTHO05D009161 5.1e-18 96.3 152 39.5
Oeu037289.1 Olea europaea HOM05D001568 ORTHO05D009161 8.7e-18 95.5 132 40.9
GSVIVG01037056001 Vitis vinifera HOM05D001568 ORTHO05D008804 4.8e-16 89.7 133 37.6
Sopen10g020220 Solanum pennellii HOM05D001568 ORTHO05D009161 5.3e-15 86.3 91 46.2
COL.COLO4_02194 Corchorus olitorius HOM05D001568 ORTHO05D009161 9.0e-15 85.5 102 39.2
Psat4g228720 Pisum sativum HOM05D001568 ORTHO05D009161 1.2e-14 85.1 90 47.8
Eucgr.I02493 Eucalyptus grandis HOM05D001568 ORTHO05D008804 4.9e-13 79.7 133 36.1
BcaB03g16261 Brassica carinata HOM05D001568 ORTHO05D009161 1.8e-10 71.2 106 37.7
ECA234G4452 Erigeron canadensis HOM05D000058 ORTHO05D000255 8.2e-08 62.4 79 44.3


User provided reference genes

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