Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0116s0019 Marchantia polymorpha HOM05D006125 ORTHO05D007404 1.7e-31 139.4 112 100.0
CSS0032300 Camellia sinensis var. sinensis HOM05D006125 ORTHO05D007404 6.8e-09 64.3 42 59.5
MD09G1225600 Malus domestica HOM05D006125 ORTHO05D007404 8.8e-09 63.9 42 59.5
MD17G1224400 Malus domestica HOM05D006125 ORTHO05D007404 1.5e-08 63.2 42 57.1
Phvul.010G162500 Phaseolus vulgaris HOM05D006125 ORTHO05D007404 1.5e-08 63.2 42 57.1
Prupe.3G100100 Prunus persica HOM05D006125 ORTHO05D007404 2.0e-08 62.8 42 54.8
Glyma.07G021900 Glycine max HOM05D006125 ORTHO05D007404 2.6e-08 62.4 42 59.5
Atru.chr1.2788 Acer truncatum HOM05D006125 ORTHO05D007404 3.4e-08 62.0 42 54.8
Ca_06644_v3 Cicer arietinum L. HOM05D006125 ORTHO05D007404 4.4e-08 61.6 42 54.8
FAN02G1155 Fragaria x ananassa HOM05D006125 ORTHO05D007404 7.5e-08 60.8 42 52.4
Lj3g0014233 Lotus japonicus HOM05D006125 ORTHO05D007404 7.5e-08 60.8 42 52.4
Prupe.2G074900 Prunus persica HOM05D006125 ORTHO05D007404 9.8e-08 60.5 42 52.4
Actinidia25476 Actinidia chinensis HOM05D006125 ORTHO05D007404 1.3e-07 60.1 42 52.4
Glyma.08G219900 Glycine max HOM05D006125 ORTHO05D007404 1.3e-07 60.1 42 54.8
RcHm_v2.0_Chr2g0132751 Rosa chinensis HOM05D006125 ORTHO05D007404 1.3e-07 60.1 42 52.4
Actinidia18251 Actinidia chinensis HOM05D006125 ORTHO05D007404 1.7e-07 59.7 42 50.0
FAN05G4250 Fragaria x ananassa HOM05D006125 ORTHO05D007404 2.2e-07 59.3 42 50.0
Pp3c10_10990 Physcomitrium patens HOM05D006125 ORTHO05D007404 2.2e-07 59.3 42 59.5
Psat7g263200 Pisum sativum HOM05D006125 ORTHO05D007404 2.2e-07 59.3 42 54.8
AUR62034053 Chenopodium quinoa HOM05D006125 ORTHO05D007404 2.8e-07 58.9 42 54.8
FvH4_6g28500 Fragaria vesca HOM05D006125 ORTHO05D007404 2.8e-07 58.9 41 51.2
FAN14G2502 Fragaria x ananassa HOM05D006125 ORTHO05D007404 2.8e-07 58.9 41 51.2
CiPaw.09G167300 Carya illinoinensis HOM05D006125 ORTHO05D007404 3.7e-07 58.5 42 52.4
Lalb_Chr04g0264571 Lupinus albus HOM05D006125 ORTHO05D007404 3.7e-07 58.5 42 50.0
PGR031G3360 Punica granatum HOM05D006125 ORTHO05D007404 3.7e-07 58.5 42 52.4
PGR037G0004 Punica granatum HOM05D006125 ORTHO05D007404 3.7e-07 58.5 42 52.4
Medtr4g007290 Medicago truncatula HOM05D006125 ORTHO05D007404 4.8e-07 58.2 42 54.8
Os12g0556400 Oryza sativa ssp. japonica HOM05D006125 ORTHO05D007404 4.8e-07 58.2 42 52.4
TPR.G3325 Trifolium pratense HOM05D006125 ORTHO05D007404 4.8e-07 58.2 41 56.1
AUR62040628 Chenopodium quinoa HOM05D006125 ORTHO05D007404 6.3e-07 57.8 42 52.4
Ciclev10026865m.g Citrus clementina HOM05D006125 ORTHO05D007404 6.3e-07 57.8 42 50.0
Eucgr.J03118 Eucalyptus grandis HOM05D006125 ORTHO05D007404 6.3e-07 57.8 42 52.4
Duzib160G0610 Durio zibethinus HOM05D006125 ORTHO05D007404 8.3e-07 57.4 42 52.4
EL10Ac8g19423 Beta vulgaris HOM05D006125 ORTHO05D007404 1.1e-06 57.0 41 51.2
Gohir.A06G114500 Gossypium hirsutum HOM05D006125 ORTHO05D007404 1.4e-06 56.6 42 52.4
Gohir.D06G119100 Gossypium hirsutum HOM05D006125 ORTHO05D007404 1.4e-06 56.6 42 52.4
Thecc.06G043200 Theobroma cacao HOM05D006125 ORTHO05D007404 1.4e-06 56.6 42 50.0
TPR.G29449 Trifolium pratense HOM05D006125 ORTHO05D007404 1.4e-06 56.6 42 52.4
HPP92_003757 Vanilla planifolia HOM05D006125 ORTHO05D007404 1.8e-06 56.2 42 50.0
Zm00001eb176360 Zea mays HOM05D006125 ORTHO05D007404 1.8e-06 56.2 42 52.4
arahy.Tifrunner.gnm1.ann1.CEK6A4 Arachis hypogaea HOM05D006125 ORTHO05D007404 2.4e-06 55.8 42 50.0
arahy.Tifrunner.gnm1.ann1.P1DY4U Arachis hypogaea HOM05D006125 ORTHO05D007404 2.4e-06 55.8 42 50.0
SalBow7G4057 Salvia bowleyana HOM05D006125 ORTHO05D007404 2.4e-06 55.8 42 50.0
TWI12G0957 Tripterygium wilfordii HOM05D006125 ORTHO05D007404 2.4e-06 55.8 42 52.4
TAR383G0490 Trochodendron aralioides HOM05D006125 ORTHO05D007404 2.4e-06 55.8 42 50.0
CANSAT56G2558 Cannabis sativa HOM05D006125 ORTHO05D007404 3.1e-06 55.5 41 51.2
Manes.04G101402 Manihot esculenta HOM05D006125 ORTHO05D007404 4.1e-06 55.1 38 57.9
Aqoxy7G03387 Aquilegia oxysepala HOM05D006125 ORTHO05D007404 5.4e-06 54.7 41 48.8
Duzib235G1153 Durio zibethinus HOM05D006125 ORTHO05D007404 5.4e-06 54.7 42 47.6


User provided reference genes

Program Settings