Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0116s0013 Marchantia polymorpha HOM05D004406 ORTHO05D005660 1.2e-305 1052.4 516 100.0
Pp3c22_7820 Physcomitrium patens HOM05D004406 ORTHO05D005660 4.4e-188 661.8 505 65.0
SEGI_06613 Sequoiadendron giganteum HOM05D004406 ORTHO05D005660 1.5e-183 646.7 512 63.3
ATR0739G109 Amborella trichopoda HOM05D004406 ORTHO05D005660 1.7e-171 606.7 510 59.4
CDE06G1959 Ceratophyllum demersum HOM05D004406 ORTHO05D005660 2.6e-164 582.8 530 58.1
SMO353G0172 Selaginella moellendorffii HOM05D004406 ORTHO05D005660 4.4e-164 582.0 514 59.1
Gorai.007G217900 Gossypium raimondii HOM05D004406 ORTHO05D005660 1.3e-163 580.5 509 58.7
COL.COLO4_35795 Corchorus olitorius HOM05D004406 ORTHO05D005660 3.8e-163 578.9 513 58.1
PSO528G0243 Papaver somniferum HOM05D004406 ORTHO05D005660 8.4e-163 577.8 513 57.1
PSO170G0587 Papaver somniferum HOM05D004406 ORTHO05D005660 1.1e-162 577.4 513 57.1
Gohir.D11G203200 Gossypium hirsutum HOM05D004406 ORTHO05D005660 1.4e-162 577.0 509 58.3
Gohir.A11G220400 Gossypium hirsutum HOM05D004406 ORTHO05D005660 1.9e-162 576.6 509 58.3
Aqoxy6G02573 Aquilegia oxysepala HOM05D004406 ORTHO05D005660 7.1e-162 574.7 515 56.5
TAR376G0792 Trochodendron aralioides HOM05D004406 ORTHO05D005660 7.1e-162 574.7 509 58.2
Ca_03669_v3 Cicer arietinum L. HOM05D004406 ORTHO05D005660 9.3e-162 574.3 509 58.0
Prupe.4G148400 Prunus persica HOM05D004406 ORTHO05D005660 9.3e-162 574.3 509 58.2
VMungo1080G1685 Vigna mungo HOM05D004406 ORTHO05D005660 9.3e-162 574.3 509 57.6
CiPaw.01G106500 Carya illinoinensis HOM05D004406 ORTHO05D005660 1.2e-161 573.9 513 57.5
Sc03g0007790 Simmondsia chinensis HOM05D004406 ORTHO05D005660 1.6e-161 573.5 509 58.0
Thecc.01G135800 Theobroma cacao HOM05D004406 ORTHO05D005660 1.6e-161 573.5 509 58.3
GSVIVG01009332001 Vitis vinifera HOM05D004406 ORTHO05D005660 1.6e-161 573.5 513 57.1
CSS0020755 Camellia sinensis var. sinensis HOM05D004406 ORTHO05D005660 3.5e-161 572.4 514 58.2
Psat1g012120 Pisum sativum HOM05D004406 ORTHO05D005660 4.6e-161 572.0 509 57.6
arahy.Tifrunner.gnm1.ann1.L0EV17 Arachis hypogaea HOM05D004406 ORTHO05D005660 6.0e-161 571.6 513 57.1
MD05G1209100 Malus domestica HOM05D004406 ORTHO05D005660 6.0e-161 571.6 509 58.3
Actinidia18837 Actinidia chinensis HOM05D004406 ORTHO05D005660 7.8e-161 571.2 509 58.0
Atru.chr9.1518 Acer truncatum HOM05D004406 ORTHO05D005660 1.0e-160 570.9 515 56.7
Zm00001eb401770 Zea mays HOM05D004406 ORTHO05D005660 1.0e-160 570.9 508 57.9
Eucgr.F01412 Eucalyptus grandis HOM05D004406 ORTHO05D005660 1.7e-160 570.1 510 57.5
Medtr2g069330 Medicago truncatula HOM05D004406 ORTHO05D005660 3.9e-160 568.9 510 56.9
Phvul.005G057900 Phaseolus vulgaris HOM05D004406 ORTHO05D005660 6.6e-160 568.2 509 57.0
Lj3g0010925 Lotus japonicus HOM05D004406 ORTHO05D005660 1.9e-159 566.6 509 57.6
FvH4_3g16570 Fragaria vesca HOM05D004406 ORTHO05D005660 2.5e-159 566.2 509 57.6
Potri.001G394300 Populus trichocarpa HOM05D004406 ORTHO05D005660 2.5e-159 566.2 509 57.4
Os03g0180700 Oryza sativa ssp. japonica HOM05D004406 ORTHO05D005660 3.3e-159 565.8 508 57.1
Lj1C808G13 Lonicera japonica HOM05D004406 ORTHO05D005660 4.3e-159 565.5 508 57.7
Lalb_Chr25g0284911 Lupinus albus HOM05D004406 ORTHO05D005660 4.3e-159 565.5 509 56.8
Hund02309 Selenicereus undatus HOM05D004406 ORTHO05D005660 4.3e-159 565.5 518 56.6
FAN21G0297 Fragaria x ananassa HOM05D004406 ORTHO05D005660 9.6e-159 564.3 510 57.6
FAN11G0596 Fragaria x ananassa HOM05D004406 ORTHO05D005660 1.3e-158 563.9 510 57.1
RcHm_v2.0_Chr5g0027601 Rosa chinensis HOM05D004406 ORTHO05D005660 1.3e-158 563.9 509 57.6
FAN25G0744 Fragaria x ananassa HOM05D004406 ORTHO05D005660 1.6e-158 563.5 510 57.3
Manes.10G061001 Manihot esculenta HOM05D004406 ORTHO05D005660 2.1e-158 563.1 509 57.4
TWI38G2065 Tripterygium wilfordii HOM05D004406 ORTHO05D005660 2.1e-158 563.1 509 58.5
CANSAT25G0941 Cannabis sativa HOM05D004406 ORTHO05D005660 4.8e-158 562.0 509 58.0
MSTRG.6706 Avicennia marina HOM05D004406 ORTHO05D005660 1.1e-157 560.8 513 56.7
Glyma.15G256700 Glycine max HOM05D004406 ORTHO05D005660 1.1e-157 560.8 508 56.1
Cfa019935 Carpinus fangiana HOM05D004406 ORTHO05D005660 1.8e-157 560.1 510 56.5
Nn5g30617 Nelumbo nucifera HOM05D004406 ORTHO05D005660 4.0e-157 558.9 514 57.2
Ciclev10001005m.g Citrus clementina HOM05D004406 ORTHO05D005660 1.2e-156 557.4 519 57.2
Cpa.g.sc132.61 Carica papaya HOM05D004406 ORTHO05D005660 2.0e-156 556.6 510 57.6
Dinv26661 Davidia involucrata HOM05D004406 ORTHO05D005660 2.6e-156 556.2 516 56.4
Cc05_g10180 Coffea canephora HOM05D004406 ORTHO05D005660 9.9e-156 554.3 511 56.9
Aqoxy6G03019 Aquilegia oxysepala HOM05D004406 ORTHO05D005660 1.7e-155 553.5 518 55.4
Migut.M00660 Erythranthe guttata HOM05D004406 ORTHO05D005660 3.8e-155 552.4 508 57.1
EL10Ac9g22869 Beta vulgaris HOM05D004406 ORTHO05D005660 4.9e-155 552.0 506 56.1
Peaxi162Scf00003g04835 Petunia axillaris HOM05D004406 ORTHO05D005660 4.9e-155 552.0 510 57.1
PGSC0003DMG400008359 Solanum tuberosum HOM05D004406 ORTHO05D005660 4.2e-154 548.9 509 57.0
HanXRQChr11g0329941 Helianthus annuus HOM05D004406 ORTHO05D005660 7.1e-154 548.1 510 56.9
PGR004G1399 Punica granatum HOM05D004406 ORTHO05D005660 9.3e-154 547.7 516 57.8
Solyc10g078480.2 Solanum lycopersicum HOM05D004406 ORTHO05D005660 1.2e-153 547.4 509 56.8
Sopen10g029140 Solanum pennellii HOM05D004406 ORTHO05D005660 1.2e-153 547.4 509 56.8
MD10G1195500 Malus domestica HOM05D004406 ORTHO05D005660 2.1e-153 546.6 494 57.3
Carub.0001s1633 Capsella rubella HOM05D004406 ORTHO05D005660 3.5e-153 545.8 508 54.7
Thhalv10007520m.g Eutrema salsugineum HOM05D004406 ORTHO05D005660 4.6e-153 545.4 512 54.7
Sed0020103 Sechium edule HOM05D004406 ORTHO05D005660 6.0e-153 545.0 510 56.3
TAR628G1650 Trochodendron aralioides HOM05D004406 ORTHO05D005660 1.3e-152 543.9 501 57.9
C05p14870 Brassica napus HOM05D004406 ORTHO05D005660 1.8e-152 543.5 507 55.4
HPP92_025666 Vanilla planifolia HOM05D004406 ORTHO05D005660 2.3e-152 543.1 507 55.2
A06p12560 Brassica napus HOM05D004406 ORTHO05D005660 3.0e-152 542.7 507 55.4
CAN.G960.55 Capsicum annuum HOM05D004406 ORTHO05D005660 5.1e-152 542.0 510 57.1
Oeu002771.1 Olea europaea HOM05D004406 ORTHO05D005660 5.1e-152 542.0 497 59.6
ECA236G4460 Erigeron canadensis HOM05D004406 ORTHO05D005660 6.7e-152 541.6 513 55.8
Aa31LG7G1110 Aethionema arabicum HOM05D004406 ORTHO05D005660 1.1e-151 540.8 511 54.4
Sp1g14730 Schrenkiella parvula HOM05D004406 ORTHO05D005660 1.5e-151 540.4 508 54.9
THA.LOC104808122 Tarenaya hassleriana HOM05D004406 ORTHO05D005660 1.5e-151 540.4 508 54.3
BraA06t24419Z Brassica rapa HOM05D004406 ORTHO05D005660 4.3e-151 538.9 507 55.2
AL1G28740 Arabidopsis lyrata HOM05D004406 ORTHO05D005660 5.6e-151 538.5 508 54.7
BolC5t30202H Brassica oleracea HOM05D004406 ORTHO05D005660 5.6e-151 538.5 507 55.0
CsaV3_5G023450 Cucumis sativus L. HOM05D004406 ORTHO05D005660 1.6e-150 537.0 512 56.1
MELO3C022781.2 Cucumis melo HOM05D004406 ORTHO05D005660 2.8e-150 536.2 513 56.5
CARHR017050 Cardamine hirsuta HOM05D004406 ORTHO05D005660 3.7e-150 535.8 508 54.3
vmacro15158 Vaccinium macrocarpon HOM05D004406 ORTHO05D005660 3.7e-150 535.8 487 57.3
C08p44420 Brassica napus HOM05D004406 ORTHO05D005660 6.2e-150 535.0 511 54.4
arahy.Tifrunner.gnm1.ann1.BTSV3Q Arachis hypogaea HOM05D004406 ORTHO05D005660 1.8e-149 533.5 513 55.2
AT1G16570 Arabidopsis thaliana HOM05D004406 ORTHO05D005660 2.4e-149 533.1 508 54.1
BolC8t51983H Brassica oleracea HOM05D004406 ORTHO05D005660 5.3e-149 531.9 511 54.2
A09p60830 Brassica napus HOM05D004406 ORTHO05D005660 9.0e-149 531.2 512 53.7
BraA09t41456Z Brassica rapa HOM05D004406 ORTHO05D005660 9.0e-149 531.2 512 53.7
Nitab4.5_0006279g0030 Nicotiana tabacum HOM05D004406 ORTHO05D005660 9.0e-149 531.2 517 55.7
vmacro12019 Vaccinium macrocarpon HOM05D004406 ORTHO05D005660 9.0e-149 531.2 492 56.7
ClCG03G009170 Citrullus lanatus HOM05D004406 ORTHO05D005660 1.2e-148 530.8 516 54.3
unitig_62.g23080 Utricularia gibba HOM05D004406 ORTHO05D005660 7.6e-148 528.1 515 55.3
CBR_g37525 Chara braunii HOM05D004406 ORTHO05D005660 4.9e-147 525.4 544 51.8
AagrBONN_evm.TU.Sc2ySwM_362.1435 Anthoceros agrestis HOM05D004406 ORTHO05D005660 3.2e-146 522.7 514 52.5
Oeu044427.1 Olea europaea HOM05D004406 ORTHO05D005660 1.6e-145 520.4 590 50.3
QL04p076605 Quercus lobata HOM05D004406 ORTHO05D005660 6.0e-145 518.5 466 57.7
Duzib187G2008 Durio zibethinus HOM05D004406 ORTHO05D005660 5.1e-144 515.4 515 54.6
AUR62017618 Chenopodium quinoa HOM05D004406 ORTHO05D005660 1.6e-142 510.4 465 57.0
Dinv13306 Davidia involucrata HOM05D004406 ORTHO05D005660 2.1e-142 510.0 480 56.0
SGA_v2.0_scaffold73G24357 Striga asiatica HOM05D004406 ORTHO05D005660 1.4e-141 507.3 515 52.6
Nitab4.5_0000812g0150 Nicotiana tabacum HOM05D004406 ORTHO05D005660 2.4e-141 506.5 513 53.0
CDE04G2964 Ceratophyllum demersum HOM05D004406 ORTHO05D005660 5.3e-141 505.4 509 53.4
Aqoxy113s002 Aquilegia oxysepala HOM05D004406 ORTHO05D005660 1.2e-140 504.2 449 56.1
Haze_15516 Corylus avellana HOM05D004406 ORTHO05D005660 4.5e-140 502.3 506 53.0
Gohir.A09G004700 Gossypium hirsutum HOM05D004406 ORTHO05D005660 1.0e-139 501.1 507 53.3
BcaC05g25520 Brassica carinata HOM05D004406 ORTHO05D005660 1.3e-139 500.7 487 53.2
FAN16G0888 Fragaria x ananassa HOM05D004406 ORTHO05D005660 1.2e-137 494.2 508 53.7
SalBow5G0012 Salvia bowleyana HOM05D004406 ORTHO05D005660 5.7e-135 485.3 569 49.2
DCAR_013800 Daucus carota HOM05D004406 ORTHO05D005660 6.9e-133 478.4 521 50.7
Rhsim06G0184400 Rhododendron simsii HOM05D004406 ORTHO05D005660 2.5e-130 469.9 495 53.3
Glyma.08G170200 Glycine max HOM05D004406 ORTHO05D005660 6.7e-128 461.8 446 54.0
TPR.G9754 Trifolium pratense HOM05D004406 ORTHO05D005660 2.5e-127 459.9 408 56.6
AL6G51100 Arabidopsis lyrata HOM05D004406 ORTHO05D005660 2.2e-123 446.8 506 49.2
SalBow5G1666 Salvia bowleyana HOM05D004406 ORTHO05D005660 1.4e-120 437.6 448 53.8
FAN21G3885 Fragaria x ananassa HOM05D004406 ORTHO05D005660 5.1e-120 435.6 394 57.1
Lsat_1_v5_gn_7_99701 Lactuca sativa HOM05D004406 ORTHO05D005660 2.2e-118 430.3 518 48.8
Gohir.A11G222401 Gossypium hirsutum HOM05D004406 ORTHO05D005660 5.0e-115 419.1 406 53.7
Actinidia35181 Actinidia chinensis HOM05D004406 ORTHO05D005660 1.1e-101 374.8 509 43.0
Gorai.006G005600 Gossypium raimondii HOM05D004406 ORTHO05D005660 3.1e-93 346.7 508 41.1
MCO08G055 Micromonas commoda HOM05D004406 ORTHO05D005660 8.6e-91 338.6 524 40.5
PSO017G0585 Papaver somniferum HOM05D004406 ORTHO05D005660 3.5e-84 316.6 348 48.3
Cre12.g516550 Chlamydomonas reinhardtii HOM05D004406 ORTHO05D005660 1.2e-81 308.1 420 41.7
SEGI_33737 Sequoiadendron giganteum HOM05D004406 ORTHO05D005660 8.0e-81 305.4 274 56.2
Gorai.007G217600 Gossypium raimondii HOM05D004406 ORTHO05D005660 3.1e-80 303.5 379 48.5
Rhsim08G0107400 Rhododendron simsii HOM05D004406 ORTHO05D005660 8.9e-80 302.0 221 67.9
Sabra16G0258600 Salix brachista HOM05D004406 ORTHO05D005660 2.9e-78 297.0 308 50.6
Haze_26719 Corylus avellana HOM05D004406 ORTHO05D005660 1.2e-73 281.6 529 33.5
PRCOL_00002569 Prasinoderma coloniale HOM05D004406 ORTHO05D005660 1.2e-71 275.0 556 34.7
SEGI_11739 Sequoiadendron giganteum HOM05D004406 ORTHO05D005660 5.8e-71 272.7 201 67.2
Cfa025278 Carpinus fangiana HOM05D004406 ORTHO05D005660 5.8e-63 246.1 504 34.9
Gohir.D11G203050 Gossypium hirsutum HOM05D004406 ORTHO05D005660 7.1e-61 239.2 231 58.4
SHI18054 Sapria himalayana HOM05D004406 ORTHO05D005660 8.9e-56 222.2 210 56.7
SGA_v2.0_scaffold181G39778 Striga asiatica HOM05D004406 ORTHO05D005660 7.8e-52 209.1 235 49.4
CSS0001722 Camellia sinensis var. sinensis HOM05D004406 ORTHO05D005660 4.2e-45 186.8 192 56.8
CSS0016238 Camellia sinensis var. sinensis HOM05D004406 ORTHO05D005660 3.4e-39 167.2 111 64.9
SHI18055 Sapria himalayana HOM05D004406 ORTHO05D005660 4.5e-39 166.8 201 48.8
CSS0034904 Camellia sinensis var. sinensis HOM05D004406 ORTHO05D005660 2.9e-38 164.1 111 64.9
Os06g0564800 Oryza sativa ssp. japonica HOM05D004406 ORTHO05D005660 2.9e-38 164.1 106 73.6
CSS0034423 Camellia sinensis var. sinensis HOM05D004406 ORTHO05D005660 3.8e-38 163.7 111 63.1
Actinidia18838 Actinidia chinensis HOM05D004406 ORTHO05D005660 1.2e-36 158.7 347 34.6
FAN04G0447 Fragaria x ananassa HOM05D004406 ORTHO05D005660 1.2e-36 158.7 175 50.3
Zm00001eb421280 Zea mays HOM05D004406 ORTHO05D005660 1.3e-35 155.2 254 38.6
AL6G51070 Arabidopsis lyrata HOM05D004406 ORTHO05D005660 3.0e-35 154.1 133 56.4
Zm00001eb023770 Zea mays HOM05D003078 ORTHO05D003545 1.1e-34 152.1 242 40.5
Zm00001eb049380 Zea mays HOM05D004406 ORTHO05D005660 5.3e-32 143.3 104 62.5
CSS0028761 Camellia sinensis var. sinensis HOM05D004406 ORTHO05D005660 1.4e-29 135.2 111 55.9
Zm00001eb180660 Zea mays HOM05D004406 ORTHO05D000467 3.0e-27 127.5 108 62.0
Actinidia18841 Actinidia chinensis HOM05D004406 ORTHO05D005660 2.1e-25 121.3 67 86.6
Zm00001eb005970 Zea mays HOM05D004406 ORTHO05D005660 1.4e-24 118.6 172 40.1
Zm00001eb307610 Zea mays HOM05D004406 ORTHO05D005660 1.5e-23 115.2 92 63.0
TPR.G22508 Trifolium pratense HOM05D004406 ORTHO05D005660 7.6e-23 112.8 103 58.3
Actinidia18840 Actinidia chinensis HOM05D004406 ORTHO05D005660 1.1e-18 99.0 68 72.1
Haze_08535 Corylus avellana HOM05D004406 ORTHO05D005660 5.7e-18 96.7 125 46.4
Lj3g0015683 Lotus japonicus HOM05D004406 ORTHO05D036510 3.4e-15 87.4 57 68.4
C02p50710 Brassica napus HOM05D004406 ORTHO05D005660 6.9e-08 63.2 77 46.8
SEGI_01378 Sequoiadendron giganteum HOM05D000678 ORTHO05D001709 1.0e-06 59.3 37 75.7


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