Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0115s0058 Marchantia polymorpha HOM05D007927 ORTHO05D010029 8.7e-182 640.2 327 100.0
AagrBONN_evm.TU.Sc2ySwM_344.4939 Anthoceros agrestis HOM05D007927 ORTHO05D010029 1.2e-50 204.5 152 65.1
Pp3c24_20210 Physcomitrium patens HOM05D007927 ORTHO05D010029 1.1e-48 198.0 152 63.2
COL.COLO4_35756 Corchorus olitorius HOM05D007927 ORTHO05D010029 5.3e-46 189.1 195 54.9
CSS0028810 Camellia sinensis var. sinensis HOM05D007927 ORTHO05D010029 6.9e-46 188.7 144 64.6
Cfa002902 Carpinus fangiana HOM05D007927 ORTHO05D001116 6.9e-46 188.7 152 61.2
TAR628G1503 Trochodendron aralioides HOM05D007927 ORTHO05D010029 5.9e-45 185.7 152 60.5
Eucgr.J01289 Eucalyptus grandis HOM05D007927 ORTHO05D010029 1.0e-44 184.9 150 62.0
Phvul.002G272300 Phaseolus vulgaris HOM05D007927 ORTHO05D010029 1.0e-44 184.9 152 60.5
Dinv24372 Davidia involucrata HOM05D007927 ORTHO05D010029 1.3e-44 184.5 163 57.7
SEGI_35752 Sequoiadendron giganteum HOM05D007927 ORTHO05D010029 1.3e-44 184.5 208 51.0
QL10p043457 Quercus lobata HOM05D007927 ORTHO05D010029 2.9e-44 183.3 196 50.5
VMungo0251G0724 Vigna mungo HOM05D007927 ORTHO05D010029 2.9e-44 183.3 172 55.2
Cpa.g.sc42.162 Carica papaya HOM05D007927 ORTHO05D010029 3.8e-44 183.0 188 53.7
Glyma.05G191900 Glycine max HOM05D007927 ORTHO05D010029 3.8e-44 183.0 152 59.9
Rhsim08G0002700 Rhododendron simsii HOM05D007927 ORTHO05D010029 3.8e-44 183.0 171 55.0
Ciclev10002360m.g Citrus clementina HOM05D007927 ORTHO05D010029 8.5e-44 181.8 144 63.2
TPR.G37352 Trifolium pratense HOM05D007927 ORTHO05D010029 8.5e-44 181.8 152 58.6
vmacro18670 Vaccinium macrocarpon HOM05D007927 ORTHO05D010029 8.5e-44 181.8 138 63.0
CDE02G1961 Ceratophyllum demersum HOM05D007927 ORTHO05D010029 1.1e-43 181.4 152 59.2
Hma1.2p1_0476F.1_g160770 Hydrangea macrophylla HOM05D007927 ORTHO05D010029 1.1e-43 181.4 152 59.2
ATR0584G243 Amborella trichopoda HOM05D007927 ORTHO05D010029 1.9e-43 180.6 185 53.5
Atru.chr4.915 Acer truncatum HOM05D007927 ORTHO05D010029 2.5e-43 180.3 163 56.4
Actinidia01389 Actinidia chinensis HOM05D007927 ORTHO05D010029 2.5e-43 180.3 152 59.2
Ca_17635_v3 Cicer arietinum L. HOM05D007927 ORTHO05D010029 2.5e-43 180.3 152 57.9
Medtr8g093750 Medicago truncatula HOM05D007927 ORTHO05D010029 2.5e-43 180.3 152 57.9
Manes.13G085601 Manihot esculenta HOM05D007927 ORTHO05D010029 3.2e-43 179.9 189 51.3
Psat7g045960 Pisum sativum HOM05D007927 ORTHO05D010029 3.2e-43 179.9 152 58.6
TWI75G1488 Tripterygium wilfordii HOM05D007927 ORTHO05D010029 3.2e-43 179.9 150 58.7
Haze_25255 Corylus avellana HOM05D007927 ORTHO05D010029 4.2e-43 179.5 191 52.4
DCAR_014334 Daucus carota HOM05D007927 ORTHO05D010029 4.2e-43 179.5 176 54.5
Duzib264G0901 Durio zibethinus HOM05D007927 ORTHO05D010029 4.2e-43 179.5 193 51.3
PGR102G3035 Punica granatum HOM05D007927 ORTHO05D010029 4.2e-43 179.5 181 51.4
CiPaw.04G081700 Carya illinoinensis HOM05D007927 ORTHO05D010029 5.5e-43 179.1 152 58.6
CsaV3_2G019410 Cucumis sativus L. HOM05D007927 ORTHO05D010029 5.5e-43 179.1 167 54.5
Potri.005G063600 Populus trichocarpa HOM05D007927 ORTHO05D010029 5.5e-43 179.1 152 58.6
GSVIVG01026475001 Vitis vinifera HOM05D007927 ORTHO05D010029 5.5e-43 179.1 152 58.6
ClCG02G000450 Citrullus lanatus HOM05D007927 ORTHO05D010029 9.4e-43 178.3 152 57.2
FvH4_1g24440 Fragaria vesca HOM05D007927 ORTHO05D010029 1.6e-42 177.6 186 51.6
FAN19G2953 Fragaria x ananassa HOM05D007927 ORTHO05D010029 1.6e-42 177.6 186 51.6
FAN28G0845 Fragaria x ananassa HOM05D007927 ORTHO05D010029 1.6e-42 177.6 186 51.6
Lj4A837T13 Lonicera japonica HOM05D007927 ORTHO05D010029 2.1e-42 177.2 163 55.8
RcHm_v2.0_Chr2g0121541 Rosa chinensis HOM05D007927 ORTHO05D010029 2.1e-42 177.2 164 53.7
Thecc.01G133600 Theobroma cacao HOM05D007927 ORTHO05D010029 2.1e-42 177.2 205 49.3
Dinv07117 Davidia involucrata HOM05D007927 ORTHO05D010029 2.7e-42 176.8 164 55.5
Lj4g0020524 Lotus japonicus HOM05D007927 ORTHO05D010029 2.7e-42 176.8 152 57.9
Aqoxy5G02324 Aquilegia oxysepala HOM05D007927 ORTHO05D010029 3.6e-42 176.4 202 50.0
MD01G1005400 Malus domestica HOM05D007927 ORTHO05D010029 3.6e-42 176.4 190 48.9
Lsat_1_v5_gn_5_69000 Lactuca sativa HOM05D007927 ORTHO05D010029 4.7e-42 176.0 186 51.6
Gohir.A09G004300 Gossypium hirsutum HOM05D007927 ORTHO05D010029 6.1e-42 175.6 152 57.9
MBI03_g37385_MAGBIO Magnolia biondii HOM05D007927 ORTHO05D010029 7.9e-42 175.3 184 52.2
MBI03_g42544_MAGBIO Magnolia biondii HOM05D007927 ORTHO05D010029 7.9e-42 175.3 184 52.2
Lalb_Chr07g0184391 Lupinus albus HOM05D007927 ORTHO05D010029 1.4e-41 174.5 151 56.3
Gohir.D09G003800 Gossypium hirsutum HOM05D007927 ORTHO05D010029 1.8e-41 174.1 152 57.2
Os12g0189700 Oryza sativa ssp. japonica HOM05D007927 ORTHO05D010029 2.3e-41 173.7 159 58.5
Nn1g06275 Nelumbo nucifera HOM05D007927 ORTHO05D010029 3.0e-41 173.3 152 57.9
Prupe.4G271700 Prunus persica HOM05D007927 ORTHO05D010029 3.9e-41 172.9 183 51.9
ECA233G3055 Erigeron canadensis HOM05D007927 ORTHO05D010029 5.1e-41 172.6 190 50.5
HanXRQChr12g0380561 Helianthus annuus HOM05D007927 ORTHO05D010029 3.3e-40 169.9 190 48.9
FAN23G1573 Fragaria x ananassa HOM05D007927 ORTHO05D010029 3.7e-39 166.4 175 50.9
Gorai.006G005200 Gossypium raimondii HOM05D007927 ORTHO05D010029 1.8e-38 164.1 140 57.9
FAN26G1905 Fragaria x ananassa HOM05D007927 ORTHO05D010029 6.5e-36 155.6 238 41.6
MELO3C023232.2 Cucumis melo HOM05D007927 ORTHO05D010029 1.8e-33 147.5 142 54.2
Sabra07G0086100 Salix brachista HOM05D007927 ORTHO05D010029 1.4e-30 137.9 90 72.2
SEGI_09554 Sequoiadendron giganteum HOM05D007927 ORTHO05D010029 7.2e-27 125.6 81 74.1
Sabra05G0052800 Salix brachista HOM05D007927 ORTHO05D010029 1.5e-19 101.3 148 40.5
Cre01.g055151 Chlamydomonas reinhardtii HOM05D007927 ORTHO05D010029 1.9e-19 100.9 140 38.6
Lj4C838G8 Lonicera japonica HOM05D007927 ORTHO05D010029 1.2e-18 98.2 163 39.3
FAN23G0137 Fragaria x ananassa HOM05D007927 ORTHO05D010029 3.1e-14 83.6 131 39.7
FAN19G2631 Fragaria x ananassa HOM05D007927 ORTHO05D010029 1.0e-12 78.6 130 38.5
Gohir.D06G120200 Gossypium hirsutum HOM05D005170 ORTHO05D010029 5.7e-08 62.8 49 59.2
Gorai.010G138300 Gossypium raimondii HOM05D007927 ORTHO05D010029 7.5e-08 62.4 47 61.7
Gohir.D01G107700 Gossypium hirsutum HOM05D005170 ORTHO05D010029 9.8e-08 62.0 92 45.7
Gohir.D03G074800 Gossypium hirsutum HOM05D007927 ORTHO05D010029 2.9e-07 60.5 40 67.5
Gohir.D09G047700 Gossypium hirsutum HOM05D007927 ORTHO05D010029 1.1e-06 58.5 47 57.4
Pp3c2_6800 Physcomitrium patens HOM05D019817 ORTHO05D016515 1.1e-06 58.5 117 29.1
FvH4_1g24060 Fragaria vesca HOM05D007927 ORTHO05D010029 1.4e-06 58.2 40 65.0
SEGI_14611 Sequoiadendron giganteum HOM05D019817 ORTHO05D016515 1.4e-06 58.2 115 31.3
Gorai.009G413100 Gossypium raimondii HOM05D007927 ORTHO05D010029 1.8e-06 57.8 47 57.4


User provided reference genes

Program Settings