Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0114s0024 Marchantia polymorpha HOM05D006972 ORTHO05D008519 4.3e-108 394.8 221 100.0
Aqoxy5G01011 Aquilegia oxysepala HOM05D006972 ORTHO05D008519 2.4e-42 176.4 215 48.4
Sed0027466 Sechium edule HOM05D006972 ORTHO05D008519 7.0e-42 174.9 212 50.0
ECA238G2655 Erigeron canadensis HOM05D006972 ORTHO05D008519 9.2e-42 174.5 212 50.5
Cc07_g11850 Coffea canephora HOM05D006972 ORTHO05D008519 3.5e-41 172.6 215 49.8
Manes.01G155400 Manihot esculenta HOM05D006972 ORTHO05D008519 5.9e-41 171.8 212 50.9
Glyma.01G158800 Glycine max HOM05D006972 ORTHO05D008519 1.0e-40 171.0 209 53.1
Gohir.A07G171100 Gossypium hirsutum HOM05D006972 ORTHO05D008519 1.0e-40 171.0 208 49.5
HanXRQChr14g0442531 Helianthus annuus HOM05D006972 ORTHO05D008519 1.0e-40 171.0 211 52.1
MELO3C013724.2 Cucumis melo HOM05D006972 ORTHO05D008519 1.3e-40 170.6 212 49.1
Lalb_Chr16g0380011 Lupinus albus HOM05D006972 ORTHO05D008519 1.7e-40 170.2 208 51.4
RcHm_v2.0_Chr2g0097181 Rosa chinensis HOM05D006972 ORTHO05D008519 1.7e-40 170.2 212 50.5
ATR0807G046 Amborella trichopoda HOM05D006972 ORTHO05D008519 3.8e-40 169.1 210 48.1
ClCG10G000270 Citrullus lanatus HOM05D006972 ORTHO05D008519 5.0e-40 168.7 217 49.8
CSS0043244 Camellia sinensis var. sinensis HOM05D006972 ORTHO05D008519 6.6e-40 168.3 215 47.9
Ca_24981_v3 Cicer arietinum L. HOM05D006972 ORTHO05D008519 6.6e-40 168.3 208 51.4
FAN19G2622 Fragaria x ananassa HOM05D006972 ORTHO05D008519 6.6e-40 168.3 212 50.0
TWI73G0968 Tripterygium wilfordii HOM05D006972 ORTHO05D008519 6.6e-40 168.3 215 46.0
MSTRG.3630 Avicennia marina HOM05D006972 ORTHO05D008519 8.6e-40 167.9 212 47.6
Gorai.001G199000 Gossypium raimondii HOM05D006972 ORTHO05D008519 8.6e-40 167.9 208 49.0
Phvul.002G116601 Phaseolus vulgaris HOM05D006972 ORTHO05D008519 8.6e-40 167.9 208 53.4
Zm00001eb002450 Zea mays HOM05D006972 ORTHO05D008519 8.6e-40 167.9 218 45.4
TAR628G0904 Trochodendron aralioides HOM05D006972 ORTHO05D008519 1.1e-39 167.5 215 47.4
VMungo1215G1992 Vigna mungo HOM05D006972 ORTHO05D008519 1.1e-39 167.5 208 53.4
Gohir.D07G177900 Gossypium hirsutum HOM05D006972 ORTHO05D008519 1.5e-39 167.2 212 47.6
TPR.G33865 Trifolium pratense HOM05D006972 ORTHO05D008519 1.5e-39 167.2 208 51.4
Lsat_1_v5_gn_2_73640 Lactuca sativa HOM05D006972 ORTHO05D008519 1.9e-39 166.8 211 50.2
Rhsim10G0195900 Rhododendron simsii HOM05D006972 ORTHO05D008519 2.5e-39 166.4 218 48.2
Potri.005G101501 Populus trichocarpa HOM05D006972 ORTHO05D008519 3.3e-39 166.0 215 47.9
HPP92_026034 Vanilla planifolia HOM05D006972 ORTHO05D008519 3.3e-39 166.0 218 43.1
Cpa.g.sc365.5 Carica papaya HOM05D006972 ORTHO05D008519 5.6e-39 165.2 214 49.1
vmacro20633 Vaccinium macrocarpon HOM05D006972 ORTHO05D008519 5.6e-39 165.2 218 47.7
Ciclev10026547m.g Citrus clementina HOM05D006972 ORTHO05D008519 9.5e-39 164.5 219 47.5
Psat2g148200 Pisum sativum HOM05D006972 ORTHO05D008519 9.5e-39 164.5 218 50.5
CsaV3_3G000300 Cucumis sativus L. HOM05D006972 ORTHO05D008519 1.2e-38 164.1 212 48.1
Oeu012451.1 Olea europaea HOM05D006972 ORTHO05D008519 1.2e-38 164.1 215 45.1
Cfa007077 Carpinus fangiana HOM05D006972 ORTHO05D008519 1.6e-38 163.7 208 47.6
Duzib147G0479 Durio zibethinus HOM05D006972 ORTHO05D008519 1.6e-38 163.7 209 48.3
Prupe.7G182900 Prunus persica HOM05D006972 ORTHO05D008519 1.6e-38 163.7 213 46.5
AT5G66005 Arabidopsis thaliana HOM05D006972 ORTHO05D008519 2.1e-38 163.3 205 47.8
CiPaw.08G181600 Carya illinoinensis HOM05D006972 ORTHO05D008519 2.1e-38 163.3 209 47.8
Nn5g30989 Nelumbo nucifera HOM05D006972 ORTHO05D008519 2.1e-38 163.3 203 50.2
GSVIVG01026641001 Vitis vinifera HOM05D006972 ORTHO05D008519 2.1e-38 163.3 208 50.0
Haze_03655 Corylus avellana HOM05D006972 ORTHO05D008519 2.8e-38 162.9 202 49.5
QL06p052953 Quercus lobata HOM05D006972 ORTHO05D008519 2.8e-38 162.9 224 45.5
Actinidia17360 Actinidia chinensis HOM05D006972 ORTHO05D008519 3.6e-38 162.5 215 47.9
AL8G45620 Arabidopsis lyrata HOM05D006972 ORTHO05D008519 3.6e-38 162.5 205 46.8
Migut.L00961 Erythranthe guttata HOM05D006972 ORTHO05D008519 4.7e-38 162.2 222 47.3
SalBow5G0785 Salvia bowleyana HOM05D006972 ORTHO05D008519 4.7e-38 162.2 215 46.0
Eucgr.I02225 Eucalyptus grandis HOM05D006972 ORTHO05D008519 6.1e-38 161.8 215 46.0
Atru.chr3.134 Acer truncatum HOM05D006972 ORTHO05D008519 8.0e-38 161.4 208 48.1
CANSAT25G3183 Cannabis sativa HOM05D006972 ORTHO05D008519 1.0e-37 161.0 212 47.2
Ah.02g113990 Amaranthus hybridus HOM05D006972 ORTHO05D008519 4.0e-37 159.1 216 44.9
AUR62021571 Chenopodium quinoa HOM05D006972 ORTHO05D008519 5.2e-37 158.7 214 46.3
Lj2g0018473 Lotus japonicus HOM05D006972 ORTHO05D008519 5.2e-37 158.7 209 49.3
EL10Ac5g11121 Beta vulgaris HOM05D006972 ORTHO05D008519 6.8e-37 158.3 213 46.5
Nitab4.5_0000495g0120 Nicotiana tabacum HOM05D006972 ORTHO05D008519 6.8e-37 158.3 215 47.4
Nitab4.5_0005297g0020 Nicotiana tabacum HOM05D006972 ORTHO05D008519 6.8e-37 158.3 215 47.9
Thecc.01G005600 Theobroma cacao HOM05D006972 ORTHO05D008519 6.8e-37 158.3 209 45.9
Hund19696 Selenicereus undatus HOM05D006972 ORTHO05D008519 1.2e-36 157.5 215 45.6
AUR62008520 Chenopodium quinoa HOM05D006972 ORTHO05D008519 1.5e-36 157.1 217 45.6
CDE04G1133 Ceratophyllum demersum HOM05D006972 ORTHO05D008519 2.6e-36 156.4 203 46.8
THA.LOC104826441 Tarenaya hassleriana HOM05D006972 ORTHO05D008519 3.4e-36 156.0 208 46.6
PSO541G2195 Papaver somniferum HOM05D006972 ORTHO05D008519 5.7e-36 155.2 218 46.3
MBI05_g14344_MAGBIO Magnolia biondii HOM05D006972 ORTHO05D008519 1.3e-35 154.1 202 47.0
Solyc03g032120.3 Solanum lycopersicum HOM05D006972 ORTHO05D008519 1.3e-35 154.1 215 46.0
FvH4_1g10330 Fragaria vesca HOM05D006972 ORTHO05D008519 1.2e-33 147.5 175 53.7
CAN.G354.14 Capsicum annuum HOM05D006972 ORTHO05D008519 2.0e-33 146.7 203 47.3
Carub.0008s2851 Capsella rubella HOM05D006972 ORTHO05D008519 4.6e-33 145.6 220 42.3
Medtr5g024200 Medicago truncatula HOM05D006972 ORTHO05D008519 1.3e-32 144.1 171 54.4
Haze_03661 Corylus avellana HOM05D006972 ORTHO05D008519 1.7e-32 143.7 171 52.0
SGA_v2.0_scaffold132G34519 Striga asiatica HOM05D006972 ORTHO05D008519 1.7e-32 143.7 195 45.1
arahy.Tifrunner.gnm1.ann1.B19VPR Arachis hypogaea HOM05D006972 ORTHO05D008519 3.0e-32 142.9 192 46.9
arahy.Tifrunner.gnm1.ann1.K20VQB Arachis hypogaea HOM05D006972 ORTHO05D008519 3.0e-32 142.9 192 46.9
PSO675G3277 Papaver somniferum HOM05D006972 ORTHO05D008519 6.6e-32 141.7 195 46.2
Sc03g0003950 Simmondsia chinensis HOM05D006972 ORTHO05D008519 7.3e-31 138.3 178 48.3
COL.COLO4_24144 Corchorus olitorius HOM05D006972 ORTHO05D008519 2.0e-28 130.2 195 44.1
RcHm_v2.0_Chr2g0090391 Rosa chinensis HOM05D006972 ORTHO05D008519 4.4e-28 129.0 167 49.1
RcHm_v2.0_Chr1g0346531 Rosa chinensis HOM05D006972 ORTHO05D008519 5.8e-28 128.6 167 50.9
FAN23G2574 Fragaria x ananassa HOM05D006972 ORTHO05D008519 2.2e-27 126.7 249 39.4
Cre16.g682050 Chlamydomonas reinhardtii HOM05D006972 ORTHO05D008519 2.0e-25 120.2 216 40.3
MD15G1231300 Malus domestica HOM05D006972 ORTHO05D008519 5.6e-23 112.1 129 49.6
MCO16G109 Micromonas commoda HOM05D006972 ORTHO05D008519 2.1e-22 110.2 217 37.8
SMO352G0055 Selaginella moellendorffii HOM05D006972 ORTHO05D008519 1.4e-21 107.5 159 45.3
unitig_747.g21812 Utricularia gibba HOM05D006972 ORTHO05D008519 6.8e-21 105.1 219 36.5
Mapoly0023s0154 Marchantia polymorpha HOM05D006972 ORTHO05D008519 5.8e-20 102.1 211 34.1
Pp3c7_7150 Physcomitrium patens HOM05D006972 ORTHO05D008519 7.5e-20 101.7 203 35.5
Os03g0130750 Oryza sativa ssp. japonica HOM05D006972 ORTHO05D008519 4.9e-19 99.0 144 43.8
Sopen03g005970 Solanum pennellii HOM05D006972 ORTHO05D008519 1.4e-18 97.4 107 54.2
Pp3c11_19180 Physcomitrium patens HOM05D006972 ORTHO05D008519 1.9e-18 97.1 203 34.5
Peaxi162Scf00122g02416 Petunia axillaris HOM05D006972 ORTHO05D008519 3.2e-18 96.3 128 46.1
FAN26G0227 Fragaria x ananassa HOM05D006972 ORTHO05D008519 1.6e-17 94.0 130 50.8
FAN28G2862 Fragaria x ananassa HOM05D006972 ORTHO05D008519 2.7e-17 93.2 143 47.6
CBR_g19759 Chara braunii HOM05D006972 ORTHO05D008519 5.6e-15 85.5 153 39.9
SMO147G0393 Selaginella moellendorffii HOM05D006972 ORTHO05D008519 9.5e-15 84.7 142 35.9
Lsat_1_v5_gn_5_10160 Lactuca sativa HOM05D006972 ORTHO05D008519 1.6e-14 84.0 143 45.5
PRCOL_00004399 Prasinoderma coloniale HOM05D006972 ORTHO05D008519 2.3e-13 80.1 175 38.3
MD15G1231400 Malus domestica HOM05D006972 ORTHO05D008519 3.1e-13 79.7 75 53.3
RcHm_v2.0_Chr5g0015201 Rosa chinensis HOM05D006972 ORTHO05D008519 1.5e-12 77.4 90 52.2
CANSAT35G0485 Cannabis sativa HOM05D006972 ORTHO05D008519 4.4e-12 75.9 88 46.6
RcHm_v2.0_Chr5g0047551 Rosa chinensis HOM05D006972 ORTHO05D008519 8.4e-11 71.6 91 49.5
arahy.Tifrunner.gnm1.ann1.J6JT3S Arachis hypogaea HOM05D006972 ORTHO05D008519 1.0e-08 64.7 60 53.3
Actinidia22899 Actinidia chinensis HOM05D006972 ORTHO05D008519 5.1e-08 62.4 79 44.3
Lsat_1_v5_gn_1_125281 Lactuca sativa HOM05D006972 ORTHO05D008519 8.6e-08 61.6 67 55.2
Glyma.11G085800 Glycine max HOM05D006972 ORTHO05D008519 9.6e-07 58.2 164 32.3
AagrBONN_evm.TU.Sc2ySwM_228.4669 Anthoceros agrestis HOM05D006972 ORTHO05D008519 2.8e-06 56.6 76 35.5


User provided reference genes

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